RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 MAP2P11137 1827 aaKnown RBP14.57□□□□□ -0.08
PDGFRA-205ENST00000507536 C7P10643 843 aa14.57□□□□□ -0.08
PDGFRA-205ENST00000507536 HOXC9P31274 260 aa14.57□□□□□ -0.08
PDGFRA-205ENST00000507536 SYT17Q9BSW7 474 aa14.57□□□□□ -0.08
PDGFRA-205ENST00000507536 MAP3K5Q99683 1374 aa14.57□□□□□ -0.08
PDGFRA-205ENST00000507536 POTEB2H3BUK9 544 aa14.56□□□□□ -0.08
PDGFRA-205ENST00000507536 LTV1Q96GA3 475 aaPredicted RBP14.56□□□□□ -0.08
PDGFRA-205ENST00000507536 RTL1A6NKG5 1358 aa14.56□□□□□ -0.08
PDGFRA-205ENST00000507536 UBR3Q6ZT12 1888 aa14.55□□□□□ -0.08
PDGFRA-205ENST00000507536 DDX54Q8TDD1 881 aaKnown RBP14.54□□□□□ -0.08
PDGFRA-205ENST00000507536 COG3Q96JB2 828 aa14.54□□□□□ -0.08
PDGFRA-205ENST00000507536 CEP350Q5VT06 3117 aa14.53□□□□□ -0.08
PDGFRA-205ENST00000507536 USP47Q96K76 1375 aa14.53□□□□□ -0.08
PDGFRA-205ENST00000507536 PNPLA7Q6ZV29 1317 aa14.53□□□□□ -0.08
PDGFRA-205ENST00000507536 POTEFA5A3E0 1075 aa14.53□□□□□ -0.08
PDGFRA-205ENST00000507536 KCNQ4P56696 695 aa14.52□□□□□ -0.09
PDGFRA-205ENST00000507536 RRS1Q15050 365 aaKnown RBP14.52□□□□□ -0.09
PDGFRA-205ENST00000507536 ARXQ96QS3 562 aa14.52□□□□□ -0.09
PDGFRA-205ENST00000507536 FYB1O15117 783 aa14.51□□□□□ -0.09
PDGFRA-205ENST00000507536 PRIM1P49642 420 aaKnown RBP14.51□□□□□ -0.09
PDGFRA-205ENST00000507536 SLC27A3Q5K4L6 730 aa14.51□□□□□ -0.09
PDGFRA-205ENST00000507536 C4BP0C0L5 1744 aa14.5□□□□□ -0.09
PDGFRA-205ENST00000507536 AMPHP49418 695 aa14.5□□□□□ -0.09
PDGFRA-205ENST00000507536 PSEN1P49768 467 aa14.5□□□□□ -0.09
PDGFRA-205ENST00000507536 NBPF6Q5VWK0 638 aa14.5□□□□□ -0.09
PDGFRA-205ENST00000507536 RNF25Q96BH1 459 aaPredicted RBP14.5□□□□□ -0.09
PDGFRA-205ENST00000507536 NBPF4Q96M43 638 aa14.5□□□□□ -0.09
PDGFRA-205ENST00000507536 NCAPD2Q15021 1401 aa14.49□□□□□ -0.09
PDGFRA-205ENST00000507536 USHBP1Q8N6Y0 703 aa14.49□□□□□ -0.09
PDGFRA-205ENST00000507536 ZNF784Q8NCA9 323 aaPredicted RBP14.49□□□□□ -0.09
PDGFRA-205ENST00000507536 ZCRB1Q8TBF4 217 aaKnown RBP14.49□□□□□ -0.09
PDGFRA-205ENST00000507536 GGNBP2Q9H3C7 697 aa14.49□□□□□ -0.09
PDGFRA-205ENST00000507536 SYTL4Q96C24 671 aaPredicted RBP14.48□□□□□ -0.09
PDGFRA-205ENST00000507536 COLQQ9Y215 455 aaPredicted RBP14.48□□□□□ -0.09
PDGFRA-205ENST00000507536 INSRP06213 1382 aa14.47□□□□□ -0.09
PDGFRA-205ENST00000507536 PDAP1Q13442 181 aaKnown RBP14.47□□□□□ -0.09
PDGFRA-205ENST00000507536 SLC16A10Q8TF71 515 aa14.47□□□□□ -0.09
PDGFRA-205ENST00000507536 FLT4P35916 1363 aa14.47□□□□□ -0.09
PDGFRA-205ENST00000507536 HSP90AB2PQ58FF8 381 aa14.46□□□□□ -0.09
PDGFRA-205ENST00000507536 IER5LQ5T953 404 aa14.46□□□□□ -0.09
PDGFRA-205ENST00000507536 SMG6Q86US8 1419 aaKnown RBP14.46□□□□□ -0.09
PDGFRA-205ENST00000507536 KIF24Q5T7B8 1368 aa14.46□□□□□ -0.1
PDGFRA-205ENST00000507536 CGNL1Q0VF96 1302 aa14.45□□□□□ -0.1
PDGFRA-205ENST00000507536 SLC24A1O60721 1099 aa14.45□□□□□ -0.1
PDGFRA-205ENST00000507536 TMF1P82094 1093 aa14.45□□□□□ -0.1
PDGFRA-205ENST00000507536 CARD14Q9BXL6 1004 aa14.45□□□□□ -0.1
PDGFRA-205ENST00000507536 NSD3Q9BZ95 1437 aa14.44□□□□□ -0.1
PDGFRA-205ENST00000507536 POTEJP0CG39 1038 aa14.44□□□□□ -0.1
PDGFRA-205ENST00000507536 TFCP2L1Q9NZI6 479 aa14.44□□□□□ -0.1
PDGFRA-205ENST00000507536 NLGN2Q8NFZ4 835 aa14.43□□□□□ -0.1
PDGFRA-205ENST00000507536 CCNL1Q9UK58 526 aaPredicted RBP14.43□□□□□ -0.1
PDGFRA-205ENST00000507536 COL5A3P25940 1745 aaPredicted RBP14.42□□□□□ -0.1
PDGFRA-205ENST00000507536 KIAA1551Q9HCM1 1747 aa14.42□□□□□ -0.1
PDGFRA-205ENST00000507536 CYP27B1O15528 508 aa14.42□□□□□ -0.1
PDGFRA-205ENST00000507536 COL23A1Q86Y22 540 aaPredicted RBP14.42□□□□□ -0.1
PDGFRA-205ENST00000507536 EMILIN1Q9Y6C2 1016 aa14.42□□□□□ -0.1
PDGFRA-205ENST00000507536 VIRMAQ69YN4 1812 aaKnown RBP14.42□□□□□ -0.1
PDGFRA-205ENST00000507536 PCDH11XQ9BZA7 1347 aa14.41□□□□□ -0.1
PDGFRA-205ENST00000507536 PCDH11YQ9BZA8 1340 aa14.41□□□□□ -0.1
PDGFRA-205ENST00000507536 KIF13BQ9NQT8 1826 aa14.41□□□□□ -0.1
PDGFRA-205ENST00000507536 RAPGEF4Q8WZA2 1011 aa14.41□□□□□ -0.1
PDGFRA-205ENST00000507536 ZNF831Q5JPB2 1677 aa14.41□□□□□ -0.1
PDGFRA-205ENST00000507536 PALLDQ8WX93 1383 aa14.4□□□□□ -0.1
PDGFRA-205ENST00000507536 RIOK3O14730 519 aaKnown RBP14.4□□□□□ -0.1
PDGFRA-205ENST00000507536 SEC24BO95487 1268 aa14.4□□□□□ -0.1
PDGFRA-205ENST00000507536 POLD1P28340 1107 aa14.4□□□□□ -0.1
PDGFRA-205ENST00000507536 AMIGO3Q86WK7 504 aa14.4□□□□□ -0.1
PDGFRA-205ENST00000507536 ECM2O94769 699 aaPredicted RBP14.39□□□□□ -0.11
PDGFRA-205ENST00000507536 TATP17735 454 aaPredicted RBP14.39□□□□□ -0.11
PDGFRA-205ENST00000507536 IRX5P78411 483 aaPredicted RBP14.39□□□□□ -0.11
PDGFRA-205ENST00000507536 C4AP0C0L4 1744 aa14.38□□□□□ -0.11
PDGFRA-205ENST00000507536 YBX3P16989 372 aaKnown RBP eCLIP14.38□□□□□ -0.11
PDGFRA-205ENST00000507536 GPR162Q16538 588 aa14.38□□□□□ -0.11
PDGFRA-205ENST00000507536 OTUD5Q96G74 571 aa14.38□□□□□ -0.11
PDGFRA-205ENST00000507536 MYH14Q7Z406 1995 aaKnown RBP14.38□□□□□ -0.11
PDGFRA-205ENST00000507536 BRCA1P38398 1863 aaKnown RBP14.38□□□□□ -0.11
PDGFRA-205ENST00000507536 MSL1Q68DK7 614 aa14.37□□□□□ -0.11
PDGFRA-205ENST00000507536 TRIM26Q12899 539 aaPredicted RBP14.36□□□□□ -0.11
PDGFRA-205ENST00000507536 CDCA8Q53HL2 280 aa14.36□□□□□ -0.11
PDGFRA-205ENST00000507536 MPRIPQ6WCQ1 1025 aa14.36□□□□□ -0.11
PDGFRA-205ENST00000507536 N4BP2Q86UW6 1770 aaPredicted RBP14.36□□□□□ -0.11
PDGFRA-205ENST00000507536 NKX1-1Q15270 411 aaPredicted RBP14.35□□□□□ -0.11
PDGFRA-205ENST00000507536 WASHC2AQ641Q2 1341 aa14.35□□□□□ -0.11
PDGFRA-205ENST00000507536 PIGBQ92521 554 aa14.34□□□□□ -0.11
PDGFRA-205ENST00000507536 SCN11AQ9UI33 1791 aa14.34□□□□□ -0.11
PDGFRA-205ENST00000507536 CICQ96RK0 1608 aaPredicted RBP14.33□□□□□ -0.11
PDGFRA-205ENST00000507536 PLCG2P16885 1265 aa14.33□□□□□ -0.12
PDGFRA-205ENST00000507536 C1QTNF8P60827 252 aa14.33□□□□□ -0.12
PDGFRA-205ENST00000507536 GOLGA2Q08379 1002 aa14.33□□□□□ -0.12
PDGFRA-205ENST00000507536 SMIM5Q71RC9 77 aa14.33□□□□□ -0.12
PDGFRA-205ENST00000507536 EYA1Q99502 592 aa14.33□□□□□ -0.12
PDGFRA-205ENST00000507536 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.32□□□□□ -0.12
PDGFRA-205ENST00000507536 ZFP91Q96JP5 570 aaPredicted RBP14.32□□□□□ -0.12
PDGFRA-205ENST00000507536 POLKQ9UBT6 870 aa14.32□□□□□ -0.12
PDGFRA-205ENST00000507536 KDRP35968 1356 aa14.32□□□□□ -0.12
PDGFRA-205ENST00000507536 TJP1Q07157 1748 aa14.32□□□□□ -0.12
PDGFRA-205ENST00000507536 RGL2O15211 777 aa14.31□□□□□ -0.12
PDGFRA-205ENST00000507536 PPM1GO15355 546 aaPredicted RBP14.31□□□□□ -0.12
PDGFRA-205ENST00000507536 LINC00116Q8NCU8 138 aa14.31□□□□□ -0.12
PDGFRA-205ENST00000507536 ADAMTS7Q9UKP4 1686 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms