RNA–Protein interactions for RNA: ENST00000507522.1

SDHA-208, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 644 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-208ENST00000507522 UBR2Q8IWV8 1755 aa16.31■□□□□ 0.2
SDHA-208ENST00000507522 CEMIPQ8WUJ3 1361 aa16.31■□□□□ 0.2
SDHA-208ENST00000507522 GNAT3A8MTJ3 354 aa16.31■□□□□ 0.2
SDHA-208ENST00000507522 CABP4P57796 275 aa16.31■□□□□ 0.2
SDHA-208ENST00000507522 ATG3Q9NT62 314 aa16.31■□□□□ 0.2
SDHA-208ENST00000507522 ASAP1Q9ULH1 1129 aa16.31■□□□□ 0.2
SDHA-208ENST00000507522 ANP32CO43423 234 aa16.3■□□□□ 0.2
SDHA-208ENST00000507522 NFATC2IPQ8NCF5 419 aa16.3■□□□□ 0.2
SDHA-208ENST00000507522 SLC52A2Q9HAB3 445 aa16.3■□□□□ 0.2
SDHA-208ENST00000507522 CCNL1Q9UK58 526 aaPredicted RBP16.3■□□□□ 0.2
SDHA-208ENST00000507522 COL5A3P25940 1745 aaPredicted RBP16.3■□□□□ 0.2
SDHA-208ENST00000507522 C4BP0C0L5 1744 aa16.29■□□□□ 0.2
SDHA-208ENST00000507522 IL17REQ8NFR9 667 aa16.29■□□□□ 0.2
SDHA-208ENST00000507522 PNNQ9H307 717 aaKnown RBP16.29■□□□□ 0.2
SDHA-208ENST00000507522 TJP1Q07157 1748 aa16.28■□□□□ 0.2
SDHA-208ENST00000507522 KCNQ4P56696 695 aa16.28■□□□□ 0.2
SDHA-208ENST00000507522 SLC15A2Q16348 729 aa16.28■□□□□ 0.2
SDHA-208ENST00000507522 AKT1S1Q96B36 256 aa16.28■□□□□ 0.2
SDHA-208ENST00000507522 PPP1R1BQ9UD71 204 aaPredicted RBP16.28■□□□□ 0.2
SDHA-208ENST00000507522 LOC102724428A0A0B4J2F2 783 aa16.27■□□□□ 0.2
SDHA-208ENST00000507522 HTATSF1O43719 755 aaKnown RBP16.27■□□□□ 0.2
SDHA-208ENST00000507522 SIK1P57059 783 aa16.27■□□□□ 0.2
SDHA-208ENST00000507522 ZNF827Q17R98 1081 aa16.27■□□□□ 0.2
SDHA-208ENST00000507522 CCDC184Q52MB2 194 aa16.27■□□□□ 0.2
SDHA-208ENST00000507522 SPON1Q9HCB6 807 aa16.27■□□□□ 0.2
SDHA-208ENST00000507522 STK32BQ9NY57 414 aa16.27■□□□□ 0.2
SDHA-208ENST00000507522 KCPQ6ZWJ8 1503 aa16.27■□□□□ 0.2
SDHA-208ENST00000507522 UBR3Q6ZT12 1888 aa16.27■□□□□ 0.19
SDHA-208ENST00000507522 NEFMP07197 916 aa16.26■□□□□ 0.19
SDHA-208ENST00000507522 WDR43Q15061 677 aaKnown RBP eCLIP16.26■□□□□ 0.19
SDHA-208ENST00000507522 NFE2L2Q16236 605 aa16.26■□□□□ 0.19
SDHA-208ENST00000507522 MAPK8IP3Q9UPT6 1336 aa16.25■□□□□ 0.19
SDHA-208ENST00000507522 HMGB2P26583 209 aaKnown RBP16.25■□□□□ 0.19
SDHA-208ENST00000507522 SLC4A9Q96Q91 983 aa16.25■□□□□ 0.19
SDHA-208ENST00000507522 ADAMTS8Q9UP79 889 aa16.25■□□□□ 0.19
SDHA-208ENST00000507522 COL24A1Q17RW2 1714 aa16.24■□□□□ 0.19
SDHA-208ENST00000507522 CHD4Q14839 1912 aa16.23■□□□□ 0.19
SDHA-208ENST00000507522 TEFQ10587 303 aa16.23■□□□□ 0.19
SDHA-208ENST00000507522 ITPK1Q13572 414 aa16.23■□□□□ 0.19
SDHA-208ENST00000507522 MYH14Q7Z406 1995 aaKnown RBP16.23■□□□□ 0.19
SDHA-208ENST00000507522 KDM3BQ7LBC6 1761 aa16.23■□□□□ 0.19
SDHA-208ENST00000507522 ATP6V1AP38606 617 aa16.22■□□□□ 0.19
SDHA-208ENST00000507522 MCM10Q7L590 875 aa16.22■□□□□ 0.19
SDHA-208ENST00000507522 LINC00116Q8NCU8 138 aa16.22■□□□□ 0.19
SDHA-208ENST00000507522 RTF1Q92541 710 aaKnown RBP16.22■□□□□ 0.19
SDHA-208ENST00000507522 RUNDC1Q96C34 613 aa16.22■□□□□ 0.19
SDHA-208ENST00000507522 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
SDHA-208ENST00000507522 TMPOP42166 694 aaKnown RBP16.21■□□□□ 0.19
SDHA-208ENST00000507522 SLC39A6Q13433 755 aa16.21■□□□□ 0.19
SDHA-208ENST00000507522 DCTN1Q14203 1278 aa16.21■□□□□ 0.19
SDHA-208ENST00000507522 PNPLA7Q6ZV29 1317 aa16.2■□□□□ 0.18
SDHA-208ENST00000507522 CCDC146Q8IYE0 955 aa16.2■□□□□ 0.18
SDHA-208ENST00000507522 PNISRQ8TF01 805 aaKnown RBP16.2■□□□□ 0.18
SDHA-208ENST00000507522 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
SDHA-208ENST00000507522 PDGFDQ9GZP0 370 aaPredicted RBP16.2■□□□□ 0.18
SDHA-208ENST00000507522 PTCD1O75127 700 aaKnown RBP16.19■□□□□ 0.18
SDHA-208ENST00000507522 MRS2Q9HD23 443 aa16.19■□□□□ 0.18
SDHA-208ENST00000507522 RIPK4P57078 832 aa16.18■□□□□ 0.18
SDHA-208ENST00000507522 ZNF790Q6PG37 636 aa16.18■□□□□ 0.18
SDHA-208ENST00000507522 CNTNAP4Q9C0A0 1308 aa16.18■□□□□ 0.18
SDHA-208ENST00000507522 RC3H1Q5TC82 1133 aaKnown RBP16.17■□□□□ 0.18
SDHA-208ENST00000507522 VSIG10Q8N0Z9 540 aa16.17■□□□□ 0.18
SDHA-208ENST00000507522 TFCP2L1Q9NZI6 479 aa16.17■□□□□ 0.18
SDHA-208ENST00000507522 HEG1Q9ULI3 1381 aa16.16■□□□□ 0.18
SDHA-208ENST00000507522 BTBD11A6QL63 1104 aa16.16■□□□□ 0.18
SDHA-208ENST00000507522 LMOD3Q0VAK6 560 aa16.16■□□□□ 0.18
SDHA-208ENST00000507522 TAF7Q15545 349 aaPredicted RBP16.16■□□□□ 0.18
SDHA-208ENST00000507522 AMIGO3Q86WK7 504 aa16.16■□□□□ 0.18
SDHA-208ENST00000507522 TTC5Q8N0Z6 440 aa16.16■□□□□ 0.18
SDHA-208ENST00000507522 AK7Q96M32 723 aa16.16■□□□□ 0.18
SDHA-208ENST00000507522 C4AP0C0L4 1744 aa16.16■□□□□ 0.18
SDHA-208ENST00000507522 KCNQ3O43525 872 aa16.15■□□□□ 0.18
SDHA-208ENST00000507522 COL23A1Q86Y22 540 aaPredicted RBP16.15■□□□□ 0.18
SDHA-208ENST00000507522 FLAD1Q8NFF5 587 aa16.15■□□□□ 0.18
SDHA-208ENST00000507522 SLC16A10Q8TF71 515 aa16.15■□□□□ 0.18
SDHA-208ENST00000507522 ZNF496Q96IT1 587 aaPredicted RBP16.15■□□□□ 0.18
SDHA-208ENST00000507522 THUMPD2Q9BTF0 503 aaKnown RBP16.15■□□□□ 0.18
SDHA-208ENST00000507522 TRIM35Q9UPQ4 493 aa16.15■□□□□ 0.18
SDHA-208ENST00000507522 LAMB4A4D0S4 1761 aa16.15■□□□□ 0.18
SDHA-208ENST00000507522 ZBTB7AO95365 584 aa16.14■□□□□ 0.17
SDHA-208ENST00000507522 SSFA2P28290 1259 aa16.14■□□□□ 0.17
SDHA-208ENST00000507522 DNAJC10Q8IXB1 793 aa16.14■□□□□ 0.17
SDHA-208ENST00000507522 RRP7AQ9Y3A4 280 aaKnown RBP16.14■□□□□ 0.17
SDHA-208ENST00000507522 GNPATO15228 680 aa16.13■□□□□ 0.17
SDHA-208ENST00000507522 CRKLP46109 303 aaKnown RBP16.13■□□□□ 0.17
SDHA-208ENST00000507522 FMNL2Q96PY5 1086 aa16.13■□□□□ 0.17
SDHA-208ENST00000507522 MTFR1LQ9H019 292 aa16.13■□□□□ 0.17
SDHA-208ENST00000507522 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.12■□□□□ 0.17
SDHA-208ENST00000507522 APAF1O14727 1248 aa16.12■□□□□ 0.17
SDHA-208ENST00000507522 RPS6KA4O75676 772 aa16.12■□□□□ 0.17
SDHA-208ENST00000507522 CYP19A1P11511 503 aaPredicted RBP16.12■□□□□ 0.17
SDHA-208ENST00000507522 SGIP1Q9BQI5 828 aa16.12■□□□□ 0.17
SDHA-208ENST00000507522 UTRNP46939 3433 aa16.12■□□□□ 0.17
SDHA-208ENST00000507522 PTGER2P43116 358 aa16.11■□□□□ 0.17
SDHA-208ENST00000507522 NEUROD2Q15784 382 aa16.11■□□□□ 0.17
SDHA-208ENST00000507522 INTS5Q6P9B9 1019 aaKnown RBP16.11■□□□□ 0.17
SDHA-208ENST00000507522 BABAM1Q9NWV8 329 aa16.11■□□□□ 0.17
SDHA-208ENST00000507522 ADRA2BP18089 450 aa16.1■□□□□ 0.17
SDHA-208ENST00000507522 SMIM5Q71RC9 77 aa16.1■□□□□ 0.17
SDHA-208ENST00000507522 TEX13AQ9BXU3 409 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms