RNA–Protein interactions for RNA: ENST00000507411.5

CLDND1-214, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-214ENST00000507411 ARFGEF1Q9Y6D6 1849 aa11.41□□□□□ -0.58
CLDND1-214ENST00000507411 NSD2O96028 1365 aa11.41□□□□□ -0.58
CLDND1-214ENST00000507411 DPEP1P16444 411 aa11.4□□□□□ -0.58
CLDND1-214ENST00000507411 EVX2Q03828 476 aa11.4□□□□□ -0.58
CLDND1-214ENST00000507411 DOT1LQ8TEK3 1739 aa11.4□□□□□ -0.58
CLDND1-214ENST00000507411 ADGRB1O14514 1584 aa11.39□□□□□ -0.59
CLDND1-214ENST00000507411 SOX12O15370 315 aa11.39□□□□□ -0.59
CLDND1-214ENST00000507411 MMP10P09238 476 aa11.39□□□□□ -0.59
CLDND1-214ENST00000507411 MCOLN1Q9GZU1 580 aa11.39□□□□□ -0.59
CLDND1-214ENST00000507411 SBF1O95248 1867 aa11.38□□□□□ -0.59
CLDND1-214ENST00000507411 BRCA1P38398 1863 aaKnown RBP11.38□□□□□ -0.59
CLDND1-214ENST00000507411 NSD3Q9BZ95 1437 aa11.38□□□□□ -0.59
CLDND1-214ENST00000507411 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.38□□□□□ -0.59
CLDND1-214ENST00000507411 KCNH5Q8NCM2 988 aa11.38□□□□□ -0.59
CLDND1-214ENST00000507411 GCC1Q96CN9 775 aa11.38□□□□□ -0.59
CLDND1-214ENST00000507411 DCAF5Q96JK2 942 aa11.38□□□□□ -0.59
CLDND1-214ENST00000507411 AMIGO3Q86WK7 504 aa11.37□□□□□ -0.59
CLDND1-214ENST00000507411 BEGAINQ9BUH8 593 aa11.37□□□□□ -0.59
CLDND1-214ENST00000507411 DLL1O00548 723 aa11.36□□□□□ -0.59
CLDND1-214ENST00000507411 DALRD3Q5D0E6 543 aaKnown RBP11.36□□□□□ -0.59
CLDND1-214ENST00000507411 PIM2Q9P1W9 311 aa11.36□□□□□ -0.59
CLDND1-214ENST00000507411 TAF1LQ8IZX4 1826 aa11.36□□□□□ -0.59
CLDND1-214ENST00000507411 C4BP0C0L5 1744 aa11.35□□□□□ -0.59
CLDND1-214ENST00000507411 TOGARAM1Q9Y4F4 1720 aa11.35□□□□□ -0.59
CLDND1-214ENST00000507411 TMEM88BA6NKF7 163 aa11.35□□□□□ -0.59
CLDND1-214ENST00000507411 CCDC87Q9NVE4 849 aa11.35□□□□□ -0.59
CLDND1-214ENST00000507411 UBR3Q6ZT12 1888 aa11.35□□□□□ -0.59
CLDND1-214ENST00000507411 CD44P16070 742 aaKnown RBP11.34□□□□□ -0.59
CLDND1-214ENST00000507411 SSFA2P28290 1259 aa11.34□□□□□ -0.59
CLDND1-214ENST00000507411 CUL9Q8IWT3 2517 aa11.33□□□□□ -0.6
CLDND1-214ENST00000507411 POTECB2RU33 542 aa11.33□□□□□ -0.6
CLDND1-214ENST00000507411 KCNA3P22001 575 aa11.33□□□□□ -0.6
CLDND1-214ENST00000507411 SOX10P56693 466 aa11.33□□□□□ -0.6
CLDND1-214ENST00000507411 FKBP8Q14318 412 aa11.33□□□□□ -0.6
CLDND1-214ENST00000507411 WDR33Q9C0J8 1336 aaKnown RBP11.33□□□□□ -0.6
CLDND1-214ENST00000507411 LMNB1P20700 586 aa11.32□□□□□ -0.6
CLDND1-214ENST00000507411 RASSF7Q02833 373 aa11.32□□□□□ -0.6
CLDND1-214ENST00000507411 DGKZQ13574 1117 aa11.32□□□□□ -0.6
CLDND1-214ENST00000507411 DEFB115Q30KQ5 88 aa11.32□□□□□ -0.6
CLDND1-214ENST00000507411 PASKQ96RG2 1323 aa11.32□□□□□ -0.6
CLDND1-214ENST00000507411 PALLDQ8WX93 1383 aa11.31□□□□□ -0.6
CLDND1-214ENST00000507411 RASSF10A6NK89 507 aa11.31□□□□□ -0.6
CLDND1-214ENST00000507411 HABP4Q5JVS0 413 aaKnown RBP11.31□□□□□ -0.6
CLDND1-214ENST00000507411 DPY19L2Q6NUT2 758 aa11.31□□□□□ -0.6
CLDND1-214ENST00000507411 KDM6AO15550 1401 aaPredicted RBP11.31□□□□□ -0.6
CLDND1-214ENST00000507411 TIAM2Q8IVF5 1701 aa11.3□□□□□ -0.6
CLDND1-214ENST00000507411 POTEIP0CG38 1075 aa11.3□□□□□ -0.6
CLDND1-214ENST00000507411 POTEJP0CG39 1038 aa11.3□□□□□ -0.6
CLDND1-214ENST00000507411 TSKSQ9UJT2 592 aa11.3□□□□□ -0.6
CLDND1-214ENST00000507411 NFAT5O94916 1531 aa11.3□□□□□ -0.6
CLDND1-214ENST00000507411 ANKRD24Q8TF21 1146 aa11.29□□□□□ -0.6
CLDND1-214ENST00000507411 SRPK2P78362 688 aaKnown RBP11.28□□□□□ -0.6
CLDND1-214ENST00000507411 NLGN1Q8N2Q7 840 aa11.28□□□□□ -0.6
CLDND1-214ENST00000507411 CASP8AP2Q9UKL3 1982 aa11.27□□□□□ -0.61
CLDND1-214ENST00000507411 TMF1P82094 1093 aa11.27□□□□□ -0.61
CLDND1-214ENST00000507411 NBPF15Q8N660 670 aa11.27□□□□□ -0.61
CLDND1-214ENST00000507411 PARP3Q9Y6F1 533 aa11.27□□□□□ -0.61
CLDND1-214ENST00000507411 C4AP0C0L4 1744 aa11.26□□□□□ -0.61
CLDND1-214ENST00000507411 GNPATO15228 680 aa11.26□□□□□ -0.61
CLDND1-214ENST00000507411 LDHDQ86WU2 507 aa11.26□□□□□ -0.61
CLDND1-214ENST00000507411 ZCRB1Q8TBF4 217 aaKnown RBP11.26□□□□□ -0.61
CLDND1-214ENST00000507411 ABT1Q9ULW3 272 aaKnown RBP11.26□□□□□ -0.61
CLDND1-214ENST00000507411 CLCN6P51797 869 aa11.25□□□□□ -0.61
CLDND1-214ENST00000507411 PAXIP1Q6ZW49 1069 aaPredicted RBP11.25□□□□□ -0.61
CLDND1-214ENST00000507411 A0A0C4DFX4 3053 aa11.25□□□□□ -0.61
CLDND1-214ENST00000507411 THSD7BQ9C0I4 1608 aa11.24□□□□□ -0.61
CLDND1-214ENST00000507411 GABBR2O75899 941 aa11.24□□□□□ -0.61
CLDND1-214ENST00000507411 SMARCC1Q92922 1105 aaPredicted RBP11.24□□□□□ -0.61
CLDND1-214ENST00000507411 CABP1Q9NZU7 370 aa11.24□□□□□ -0.61
CLDND1-214ENST00000507411 CCDC88AQ3V6T2 1871 aa11.23□□□□□ -0.61
CLDND1-214ENST00000507411 CA12O43570 354 aa11.23□□□□□ -0.61
CLDND1-214ENST00000507411 ITGBL1O95965 494 aaPredicted RBP11.23□□□□□ -0.61
CLDND1-214ENST00000507411 CHRNA5P30532 468 aa11.23□□□□□ -0.61
CLDND1-214ENST00000507411 ECE1P42892 770 aa11.23□□□□□ -0.61
CLDND1-214ENST00000507411 GRM1Q13255 1194 aa11.23□□□□□ -0.61
CLDND1-214ENST00000507411 LINC00116Q8NCU8 138 aa11.23□□□□□ -0.61
CLDND1-214ENST00000507411 CAPNS2Q96L46 248 aa11.23□□□□□ -0.61
CLDND1-214ENST00000507411 GPR101Q96P66 508 aaPredicted RBP11.23□□□□□ -0.61
CLDND1-214ENST00000507411 CABP2Q9NPB3 220 aa11.23□□□□□ -0.61
CLDND1-214ENST00000507411 TTC21BQ7Z4L5 1316 aa11.23□□□□□ -0.61
CLDND1-214ENST00000507411 LTBP1Q14766 1721 aa11.23□□□□□ -0.61
CLDND1-214ENST00000507411 FXR1P51114 621 aaKnown RBP eCLIP11.22□□□□□ -0.61
CLDND1-214ENST00000507411 MPRIPQ6WCQ1 1025 aa11.22□□□□□ -0.61
CLDND1-214ENST00000507411 MIER1Q8N108 512 aa11.21□□□□□ -0.61
CLDND1-214ENST00000507411 SLC17A8Q8NDX2 589 aa11.21□□□□□ -0.61
CLDND1-214ENST00000507411 TTC21AQ8NDW8 1320 aa11.2□□□□□ -0.62
CLDND1-214ENST00000507411 IQCA1LA6NCM1 817 aa11.2□□□□□ -0.62
CLDND1-214ENST00000507411 TRAPPC3LQ5T215 181 aa11.2□□□□□ -0.62
CLDND1-214ENST00000507411 LTN1O94822 1766 aa11.2□□□□□ -0.62
CLDND1-214ENST00000507411 DDNO94850 711 aaPredicted RBP11.19□□□□□ -0.62
CLDND1-214ENST00000507411 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
CLDND1-214ENST00000507411 ERFEQ4G0M1 354 aa11.19□□□□□ -0.62
CLDND1-214ENST00000507411 EAPPQ56P03 285 aaPredicted RBP11.19□□□□□ -0.62
CLDND1-214ENST00000507411 CYP4F22Q6NT55 531 aa11.19□□□□□ -0.62
CLDND1-214ENST00000507411 LTV1Q96GA3 475 aaPredicted RBP11.19□□□□□ -0.62
CLDND1-214ENST00000507411 FAM208AQ9UK61 1670 aaKnown RBP11.19□□□□□ -0.62
CLDND1-214ENST00000507411 LOC102724428A0A0B4J2F2 783 aa11.18□□□□□ -0.62
CLDND1-214ENST00000507411 LOC105371045A0A1W2PR82 267 aa11.18□□□□□ -0.62
CLDND1-214ENST00000507411 GYS1P13807 737 aa11.18□□□□□ -0.62
CLDND1-214ENST00000507411 SIK1P57059 783 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms