RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 ITPK1Q13572 414 aa12.71□□□□□ -0.37
COPS4-205ENST00000507376 COL5A3P25940 1745 aaPredicted RBP12.71□□□□□ -0.38
COPS4-205ENST00000507376 RTL1A6NKG5 1358 aa12.7□□□□□ -0.38
COPS4-205ENST00000507376 APLP1P51693 650 aa12.7□□□□□ -0.38
COPS4-205ENST00000507376 ARFGEF1Q9Y6D6 1849 aa12.69□□□□□ -0.38
COPS4-205ENST00000507376 PCNTO95613 3336 aa12.69□□□□□ -0.38
COPS4-205ENST00000507376 A0A0G2JLW4 131 aa12.69□□□□□ -0.38
COPS4-205ENST00000507376 MMP10P09238 476 aa12.69□□□□□ -0.38
COPS4-205ENST00000507376 HSP90AB2PQ58FF8 381 aa12.69□□□□□ -0.38
COPS4-205ENST00000507376 PIGBQ92521 554 aa12.69□□□□□ -0.38
COPS4-205ENST00000507376 GGNBP2Q9H3C7 697 aa12.69□□□□□ -0.38
COPS4-205ENST00000507376 PCDH11XQ9BZA7 1347 aa12.68□□□□□ -0.38
COPS4-205ENST00000507376 PCDH11YQ9BZA8 1340 aa12.68□□□□□ -0.38
COPS4-205ENST00000507376 COG3Q96JB2 828 aa12.68□□□□□ -0.38
COPS4-205ENST00000507376 BCS1LQ9Y276 419 aa12.68□□□□□ -0.38
COPS4-205ENST00000507376 ANKRD26Q9UPS8 1709 aa12.68□□□□□ -0.38
COPS4-205ENST00000507376 MYH14Q7Z406 1995 aaKnown RBP12.67□□□□□ -0.38
COPS4-205ENST00000507376 GNPATO15228 680 aa12.67□□□□□ -0.38
COPS4-205ENST00000507376 RAPGEF4Q8WZA2 1011 aa12.67□□□□□ -0.38
COPS4-205ENST00000507376 CARD11Q9BXL7 1154 aa12.67□□□□□ -0.38
COPS4-205ENST00000507376 TERF2IPQ9NYB0 399 aa12.67□□□□□ -0.38
COPS4-205ENST00000507376 KDRP35968 1356 aa12.67□□□□□ -0.38
COPS4-205ENST00000507376 SBF1O95248 1867 aa12.66□□□□□ -0.38
COPS4-205ENST00000507376 TOMM70O94826 608 aa12.66□□□□□ -0.38
COPS4-205ENST00000507376 DPEP1P16444 411 aa12.66□□□□□ -0.38
COPS4-205ENST00000507376 TATP17735 454 aaPredicted RBP12.66□□□□□ -0.38
COPS4-205ENST00000507376 TESK2Q96S53 571 aa12.66□□□□□ -0.38
COPS4-205ENST00000507376 ASAP1Q9ULH1 1129 aa12.66□□□□□ -0.38
COPS4-205ENST00000507376 TNRC6CQ9HCJ0 1690 aaKnown RBP12.66□□□□□ -0.38
COPS4-205ENST00000507376 NCAPD2Q15021 1401 aa12.65□□□□□ -0.38
COPS4-205ENST00000507376 SMG6Q86US8 1419 aaKnown RBP12.65□□□□□ -0.38
COPS4-205ENST00000507376 NSD3Q9BZ95 1437 aa12.65□□□□□ -0.38
COPS4-205ENST00000507376 LOC102724428A0A0B4J2F2 783 aa12.65□□□□□ -0.38
COPS4-205ENST00000507376 SIK1P57059 783 aa12.65□□□□□ -0.38
COPS4-205ENST00000507376 KLRG1Q96E93 195 aa12.65□□□□□ -0.38
COPS4-205ENST00000507376 SLC4A9Q96Q91 983 aa12.65□□□□□ -0.38
COPS4-205ENST00000507376 EMILIN1Q9Y6C2 1016 aa12.65□□□□□ -0.38
COPS4-205ENST00000507376 SSFA2P28290 1259 aa12.64□□□□□ -0.39
COPS4-205ENST00000507376 PLCB2Q00722 1185 aa12.64□□□□□ -0.39
COPS4-205ENST00000507376 ARHGAP27Q6ZUM4 889 aa12.64□□□□□ -0.39
COPS4-205ENST00000507376 FLAD1Q8NFF5 587 aa12.64□□□□□ -0.39
COPS4-205ENST00000507376 FBXO3Q9UK99 471 aa12.64□□□□□ -0.39
COPS4-205ENST00000507376 TIAM2Q8IVF5 1701 aa12.64□□□□□ -0.39
COPS4-205ENST00000507376 C9orf131Q5VYM1 1079 aa12.63□□□□□ -0.39
COPS4-205ENST00000507376 TNS4Q8IZW8 715 aa12.63□□□□□ -0.39
COPS4-205ENST00000507376 JMYQ8N9B5 988 aa12.63□□□□□ -0.39
COPS4-205ENST00000507376 INSRP06213 1382 aa12.63□□□□□ -0.39
COPS4-205ENST00000507376 ADAMTS7Q9UKP4 1686 aa12.63□□□□□ -0.39
COPS4-205ENST00000507376 TJP1Q07157 1748 aa12.62□□□□□ -0.39
COPS4-205ENST00000507376 FLT4P35916 1363 aa12.62□□□□□ -0.39
COPS4-205ENST00000507376 FYB1O15117 783 aa12.62□□□□□ -0.39
COPS4-205ENST00000507376 REM2Q8IYK8 340 aaPredicted RBP12.62□□□□□ -0.39
COPS4-205ENST00000507376 KCNA3P22001 575 aa12.61□□□□□ -0.39
COPS4-205ENST00000507376 RBM46Q8TBY0 533 aaKnown RBP12.61□□□□□ -0.39
COPS4-205ENST00000507376 CGNL1Q0VF96 1302 aa12.61□□□□□ -0.39
COPS4-205ENST00000507376 FCHSD2O94868 740 aa12.6□□□□□ -0.39
COPS4-205ENST00000507376 ATP6V1AP38606 617 aa12.6□□□□□ -0.39
COPS4-205ENST00000507376 PRELPP51888 382 aa12.6□□□□□ -0.39
COPS4-205ENST00000507376 RASSF7Q02833 373 aa12.6□□□□□ -0.39
COPS4-205ENST00000507376 ATG3Q9NT62 314 aa12.6□□□□□ -0.39
COPS4-205ENST00000507376 ST20-MTHFSA0A0A6YYL1 179 aa12.59□□□□□ -0.39
COPS4-205ENST00000507376 CHRNA5P30532 468 aa12.59□□□□□ -0.39
COPS4-205ENST00000507376 DDR1Q08345 913 aa12.59□□□□□ -0.39
COPS4-205ENST00000507376 SMARCC1Q92922 1105 aaPredicted RBP12.59□□□□□ -0.39
COPS4-205ENST00000507376 SRP68Q9UHB9 627 aaKnown RBP12.59□□□□□ -0.39
COPS4-205ENST00000507376 CCDC88AQ3V6T2 1871 aa12.59□□□□□ -0.39
COPS4-205ENST00000507376 ZNF831Q5JPB2 1677 aa12.58□□□□□ -0.4
COPS4-205ENST00000507376 AFDNP55196 1824 aaKnown RBP12.58□□□□□ -0.4
COPS4-205ENST00000507376 KDM6AO15550 1401 aaPredicted RBP12.58□□□□□ -0.4
COPS4-205ENST00000507376 HSPA1AP0DMV8 641 aaKnown RBP12.58□□□□□ -0.4
COPS4-205ENST00000507376 HSPA1BP0DMV9 641 aaKnown RBP12.58□□□□□ -0.4
COPS4-205ENST00000507376 GYS1P13807 737 aa12.58□□□□□ -0.4
COPS4-205ENST00000507376 RRAGCQ9HB90 399 aa12.58□□□□□ -0.4
COPS4-205ENST00000507376 TMOD3Q9NYL9 352 aa12.58□□□□□ -0.4
COPS4-205ENST00000507376 RNF181Q9P0P0 153 aa12.58□□□□□ -0.4
COPS4-205ENST00000507376 NKX1-1Q15270 411 aaPredicted RBP12.57□□□□□ -0.4
COPS4-205ENST00000507376 ARHGEF1Q92888 912 aaKnown RBP12.57□□□□□ -0.4
COPS4-205ENST00000507376 PLEKHG2Q9H7P9 1386 aa12.56□□□□□ -0.4
COPS4-205ENST00000507376 DLEC1Q9Y238 1755 aa12.56□□□□□ -0.4
COPS4-205ENST00000507376 DCAF5Q96JK2 942 aa12.56□□□□□ -0.4
COPS4-205ENST00000507376 PPM1GO15355 546 aaPredicted RBP12.55□□□□□ -0.4
COPS4-205ENST00000507376 PHKG2P15735 406 aa12.55□□□□□ -0.4
COPS4-205ENST00000507376 TGFB2P61812 414 aa12.55□□□□□ -0.4
COPS4-205ENST00000507376 EYA1Q99502 592 aa12.55□□□□□ -0.4
COPS4-205ENST00000507376 COL11A2P13942 1736 aaPredicted RBP12.54□□□□□ -0.4
COPS4-205ENST00000507376 TMF1P82094 1093 aa12.54□□□□□ -0.4
COPS4-205ENST00000507376 C16orf71Q8IYS4 520 aaPredicted RBP12.54□□□□□ -0.4
COPS4-205ENST00000507376 CARD14Q9BXL6 1004 aa12.54□□□□□ -0.4
COPS4-205ENST00000507376 CCDC87Q9NVE4 849 aa12.53□□□□□ -0.4
COPS4-205ENST00000507376 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
COPS4-205ENST00000507376 CARMIL3Q8ND23 1372 aa12.53□□□□□ -0.4
COPS4-205ENST00000507376 FSTL1Q12841 308 aa12.52□□□□□ -0.41
COPS4-205ENST00000507376 TRAPPC3LQ5T215 181 aa12.52□□□□□ -0.41
COPS4-205ENST00000507376 PUS7Q96PZ0 661 aaKnown RBP12.52□□□□□ -0.41
COPS4-205ENST00000507376 TONSLQ96HA7 1378 aa12.52□□□□□ -0.41
COPS4-205ENST00000507376 NRXN2Q9P2S2 1712 aa12.51□□□□□ -0.41
COPS4-205ENST00000507376 ANKRD31Q8N7Z5 1873 aa12.51□□□□□ -0.41
COPS4-205ENST00000507376 PARP3Q9Y6F1 533 aa12.51□□□□□ -0.41
COPS4-205ENST00000507376 CNTNAP4Q9C0A0 1308 aa12.51□□□□□ -0.41
COPS4-205ENST00000507376 CACNA1SQ13698 1873 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms