RNA–Protein interactions for RNA: ENST00000507232.5

SPDL1-206, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 1 (best)

Gene SPDL1, Length 2,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-206ENST00000507232 NCOA3Q9Y6Q9 1424 aa16.04■□□□□ 0.16
SPDL1-206ENST00000507232 LTN1O94822 1766 aa16.03■□□□□ 0.16
SPDL1-206ENST00000507232 TRAK2O60296 914 aa16.03■□□□□ 0.16
SPDL1-206ENST00000507232 HMMRO75330 724 aa16.03■□□□□ 0.16
SPDL1-206ENST00000507232 ANXA1P04083 346 aa16.03■□□□□ 0.16
SPDL1-206ENST00000507232 LRRFIP2Q9Y608 721 aaKnown RBP16.03■□□□□ 0.16
SPDL1-206ENST00000507232 HDGFL1Q5TGJ6 251 aa16.03■□□□□ 0.16
SPDL1-206ENST00000507232 ORAI2Q96SN7 254 aa16.03■□□□□ 0.16
SPDL1-206ENST00000507232 USP26Q9BXU7 913 aa16.03■□□□□ 0.16
SPDL1-206ENST00000507232 HTATSF1O43719 755 aaKnown RBP16.01■□□□□ 0.15
SPDL1-206ENST00000507232 FAM208AQ9UK61 1670 aaKnown RBP16.01■□□□□ 0.15
SPDL1-206ENST00000507232 LRRC37A3O60309 1634 aa16.01■□□□□ 0.15
SPDL1-206ENST00000507232 PDE1AP54750 535 aa16.01■□□□□ 0.15
SPDL1-206ENST00000507232 MPRIPQ6WCQ1 1025 aa16.01■□□□□ 0.15
SPDL1-206ENST00000507232 RGPD2P0DJD1 1756 aa16■□□□□ 0.15
SPDL1-206ENST00000507232 IP6K1Q92551 441 aa16■□□□□ 0.15
SPDL1-206ENST00000507232 SSFA2P28290 1259 aa16■□□□□ 0.15
SPDL1-206ENST00000507232 IL1RAPL2Q9NP60 686 aa16■□□□□ 0.15
SPDL1-206ENST00000507232 AK9Q5TCS8 1911 aa15.99■□□□□ 0.15
SPDL1-206ENST00000507232 CASC1Q6TDU7 716 aa15.98■□□□□ 0.15
SPDL1-206ENST00000507232 RILPL2Q969X0 211 aa15.98■□□□□ 0.15
SPDL1-206ENST00000507232 CHPF2Q9P2E5 772 aa15.98■□□□□ 0.15
SPDL1-206ENST00000507232 ZNF530Q6P9A1 599 aaPredicted RBP15.98■□□□□ 0.15
SPDL1-206ENST00000507232 LRRCC1Q9C099 1032 aa15.98■□□□□ 0.15
SPDL1-206ENST00000507232 USP44Q9H0E7 712 aa15.98■□□□□ 0.15
SPDL1-206ENST00000507232 CHD2O14647 1828 aaKnown RBP15.97■□□□□ 0.15
SPDL1-206ENST00000507232 TRIM6-TRIM34B2RNG4 842 aa15.97■□□□□ 0.15
SPDL1-206ENST00000507232 MAP4K4O95819 1239 aaPredicted RBP15.97■□□□□ 0.15
SPDL1-206ENST00000507232 GNAI3P08754 354 aa15.97■□□□□ 0.15
SPDL1-206ENST00000507232 ATP8B2P98198 1209 aa15.97■□□□□ 0.15
SPDL1-206ENST00000507232 RAB3GAP1Q15042 981 aa15.97■□□□□ 0.15
SPDL1-206ENST00000507232 UBTFL1P0CB47 393 aaPredicted RBP15.97■□□□□ 0.15
SPDL1-206ENST00000507232 NUTM1Q86Y26 1132 aa15.97■□□□□ 0.15
SPDL1-206ENST00000507232 EIF4A1P60842 406 aaKnown RBP15.96■□□□□ 0.15
SPDL1-206ENST00000507232 PANK2Q9BZ23 570 aa15.96■□□□□ 0.15
SPDL1-206ENST00000507232 GOLGA6L3A6NEY3 463 aa15.95■□□□□ 0.14
SPDL1-206ENST00000507232 RABEP1Q15276 862 aa15.95■□□□□ 0.14
SPDL1-206ENST00000507232 NFAT5O94916 1531 aa15.95■□□□□ 0.14
SPDL1-206ENST00000507232 PRAMEF22A3QJZ6 481 aa15.95■□□□□ 0.14
SPDL1-206ENST00000507232 BTBD11A6QL63 1104 aa15.95■□□□□ 0.14
SPDL1-206ENST00000507232 DDX11L8A8MPP1 907 aa15.95■□□□□ 0.14
SPDL1-206ENST00000507232 ERC2O15083 957 aa15.95■□□□□ 0.14
SPDL1-206ENST00000507232 MX1P20591 662 aa15.95■□□□□ 0.14
SPDL1-206ENST00000507232 UNC5CLQ8IV45 518 aa15.95■□□□□ 0.14
SPDL1-206ENST00000507232 GCP02774 474 aa15.94■□□□□ 0.14
SPDL1-206ENST00000507232 NBPF7P0C2Y1 421 aaPredicted RBP15.94■□□□□ 0.14
SPDL1-206ENST00000507232 TEFQ10587 303 aa15.94■□□□□ 0.14
SPDL1-206ENST00000507232 PKP1Q13835 747 aa15.94■□□□□ 0.14
SPDL1-206ENST00000507232 NOL8Q76FK4 1167 aaKnown RBP15.94■□□□□ 0.14
SPDL1-206ENST00000507232 XRCC6P12956 609 aaKnown RBP eCLIP15.94■□□□□ 0.14
SPDL1-206ENST00000507232 PI4KAP2A4QPH2 592 aa15.93■□□□□ 0.14
SPDL1-206ENST00000507232 PPP1R42Q7Z4L9 355 aa15.93■□□□□ 0.14
SPDL1-206ENST00000507232 ZGPATQ8N5A5 531 aaKnown RBP15.93■□□□□ 0.14
SPDL1-206ENST00000507232 PI4KAP1Q8N8J0 262 aa15.93■□□□□ 0.14
SPDL1-206ENST00000507232 AXIN2Q9Y2T1 843 aa15.93■□□□□ 0.14
SPDL1-206ENST00000507232 SURF6O75683 361 aaKnown RBP15.92■□□□□ 0.14
SPDL1-206ENST00000507232 DDX17Q92841 729 aaKnown RBP15.92■□□□□ 0.14
SPDL1-206ENST00000507232 GBP4Q96PP9 640 aa15.92■□□□□ 0.14
SPDL1-206ENST00000507232 SRCIN1Q9C0H9 1055 aa15.92■□□□□ 0.14
SPDL1-206ENST00000507232 CIZ1Q9ULV3 898 aaPredicted RBP15.92■□□□□ 0.14
SPDL1-206ENST00000507232 IBTKQ9P2D0 1353 aaPredicted RBP15.92■□□□□ 0.14
SPDL1-206ENST00000507232 PXDNQ92626 1479 aa15.92■□□□□ 0.14
SPDL1-206ENST00000507232 USP54Q70EL1 1684 aa15.92■□□□□ 0.14
SPDL1-206ENST00000507232 REC8O95072 547 aa15.92■□□□□ 0.14
SPDL1-206ENST00000507232 ZC3H6P61129 1189 aaKnown RBP15.92■□□□□ 0.14
SPDL1-206ENST00000507232 L1TD1Q5T7N2 865 aaKnown RBP15.92■□□□□ 0.14
SPDL1-206ENST00000507232 KCNH5Q8NCM2 988 aa15.92■□□□□ 0.14
SPDL1-206ENST00000507232 ANKRD24Q8TF21 1146 aa15.92■□□□□ 0.14
SPDL1-206ENST00000507232 OSBPL3Q9H4L5 887 aa15.92■□□□□ 0.14
SPDL1-206ENST00000507232 SALL3Q9BXA9 1300 aa15.92■□□□□ 0.14
SPDL1-206ENST00000507232 CEMIPQ8WUJ3 1361 aa15.92■□□□□ 0.14
SPDL1-206ENST00000507232 ADGRL3Q9HAR2 1447 aa15.92■□□□□ 0.14
SPDL1-206ENST00000507232 PROSER3Q2NL68 480 aa15.91■□□□□ 0.14
SPDL1-206ENST00000507232 FOXD4L5Q5VV16 416 aaPredicted RBP15.91■□□□□ 0.14
SPDL1-206ENST00000507232 FOXD4L4Q8WXT5 416 aaPredicted RBP15.91■□□□□ 0.14
SPDL1-206ENST00000507232 CHAMP1Q96JM3 812 aa15.91■□□□□ 0.14
SPDL1-206ENST00000507232 SRGAP3O43295 1099 aa15.91■□□□□ 0.14
SPDL1-206ENST00000507232 ANO2Q9NQ90 1003 aa15.91■□□□□ 0.14
SPDL1-206ENST00000507232 PALD1Q9ULE6 856 aa15.91■□□□□ 0.14
SPDL1-206ENST00000507232 PLEKHO1Q53GL0 409 aaPredicted RBP15.9■□□□□ 0.14
SPDL1-206ENST00000507232 AKAP4Q5JQC9 854 aa15.9■□□□□ 0.14
SPDL1-206ENST00000507232 C1orf141Q5JVX7 400 aa15.9■□□□□ 0.14
SPDL1-206ENST00000507232 ESYT1Q9BSJ8 1104 aa15.9■□□□□ 0.14
SPDL1-206ENST00000507232 IL25Q9H293 177 aa15.9■□□□□ 0.14
SPDL1-206ENST00000507232 SOS1Q07889 1333 aaPredicted RBP15.89■□□□□ 0.14
SPDL1-206ENST00000507232 DNAAF4Q8WXU2 420 aa15.89■□□□□ 0.13
SPDL1-206ENST00000507232 FSD2A1L4K1 749 aa15.89■□□□□ 0.13
SPDL1-206ENST00000507232 RNMTO43148 476 aaKnown RBP15.89■□□□□ 0.13
SPDL1-206ENST00000507232 NEK4P51957 841 aa15.89■□□□□ 0.13
SPDL1-206ENST00000507232 ARHGEF25Q86VW2 580 aa15.89■□□□□ 0.13
SPDL1-206ENST00000507232 BABAM1Q9NWV8 329 aa15.89■□□□□ 0.13
SPDL1-206ENST00000507232 ST18O60284 1047 aa15.88■□□□□ 0.13
SPDL1-206ENST00000507232 CHMLP26374 656 aa15.88■□□□□ 0.13
SPDL1-206ENST00000507232 BEND3Q5T5X7 828 aa15.88■□□□□ 0.13
SPDL1-206ENST00000507232 KRT28Q7Z3Y7 464 aa15.88■□□□□ 0.13
SPDL1-206ENST00000507232 PROSER2Q86WR7 435 aaPredicted RBP15.88■□□□□ 0.13
SPDL1-206ENST00000507232 NPHP4O75161 1426 aaPredicted RBP15.88■□□□□ 0.13
SPDL1-206ENST00000507232 BAG4O95429 457 aaKnown RBP15.88■□□□□ 0.13
SPDL1-206ENST00000507232 AIMP1Q12904 312 aaKnown RBP15.88■□□□□ 0.13
SPDL1-206ENST00000507232 MCTP1Q6DN14 999 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms