RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 CC2D2BQ6DHV5 1058 aa12.83□□□□□ -0.36
PFDN1-202ENST00000507185 RNF217Q8TC41 542 aa12.83□□□□□ -0.36
PFDN1-202ENST00000507185 STK17AQ9UEE5 414 aa12.83□□□□□ -0.36
PFDN1-202ENST00000507185 PCDHB11Q9Y5F2 797 aa12.83□□□□□ -0.36
PFDN1-202ENST00000507185 ERVK-9P63128 1117 aa12.82□□□□□ -0.36
PFDN1-202ENST00000507185 ESF1Q9H501 851 aaKnown RBP12.82□□□□□ -0.36
PFDN1-202ENST00000507185 PLB1Q6P1J6 1458 aa12.8□□□□□ -0.36
PFDN1-202ENST00000507185 ABCC2Q92887 1545 aa12.8□□□□□ -0.36
PFDN1-202ENST00000507185 CCDC155Q8N6L0 562 aa12.8□□□□□ -0.36
PFDN1-202ENST00000507185 CEP126Q9P2H0 1117 aa12.8□□□□□ -0.36
PFDN1-202ENST00000507185 CARMIL1Q5VZK9 1371 aa12.8□□□□□ -0.36
PFDN1-202ENST00000507185 EIF4G2P78344 907 aaKnown RBP eCLIP12.79□□□□□ -0.36
PFDN1-202ENST00000507185 FOXD4L5Q5VV16 416 aaPredicted RBP12.79□□□□□ -0.36
PFDN1-202ENST00000507185 GDPD2Q9HCC8 539 aa12.78□□□□□ -0.36
PFDN1-202ENST00000507185 SLC35F4A4IF30 521 aa12.77□□□□□ -0.37
PFDN1-202ENST00000507185 MEN1O00255 615 aa12.77□□□□□ -0.37
PFDN1-202ENST00000507185 SCTRP47872 440 aa12.77□□□□□ -0.37
PFDN1-202ENST00000507185 IRF5Q13568 498 aa12.77□□□□□ -0.37
PFDN1-202ENST00000507185 LYSMD3Q7Z3D4 306 aa12.77□□□□□ -0.37
PFDN1-202ENST00000507185 ZSCAN1Q8NBB4 408 aa12.77□□□□□ -0.37
PFDN1-202ENST00000507185 ABL2P42684 1182 aa12.76□□□□□ -0.37
PFDN1-202ENST00000507185 RNF144AP50876 292 aaPredicted RBP12.76□□□□□ -0.37
PFDN1-202ENST00000507185 CYP2U1Q7Z449 544 aa12.76□□□□□ -0.37
PFDN1-202ENST00000507185 UACAQ9BZF9 1416 aa12.76□□□□□ -0.37
PFDN1-202ENST00000507185 A0A1W2PRU2 124 aa12.75□□□□□ -0.37
PFDN1-202ENST00000507185 CUL7Q14999 1698 aa12.74□□□□□ -0.37
PFDN1-202ENST00000507185 FAM181BA6NEQ2 426 aa12.74□□□□□ -0.37
PFDN1-202ENST00000507185 MCM6Q14566 821 aa12.74□□□□□ -0.37
PFDN1-202ENST00000507185 PRICKLE2Q7Z3G6 844 aa12.74□□□□□ -0.37
PFDN1-202ENST00000507185 NLRP3Q96P20 1036 aa12.74□□□□□ -0.37
PFDN1-202ENST00000507185 ITGA6P23229 1130 aa12.73□□□□□ -0.37
PFDN1-202ENST00000507185 VAC14Q08AM6 782 aa12.73□□□□□ -0.37
PFDN1-202ENST00000507185 TEX14Q8IWB6 1497 aa12.72□□□□□ -0.37
PFDN1-202ENST00000507185 COL17A1Q9UMD9 1497 aaPredicted RBP12.72□□□□□ -0.37
PFDN1-202ENST00000507185 GPC1P35052 558 aa12.72□□□□□ -0.37
PFDN1-202ENST00000507185 NANOS1Q8WY41 292 aaKnown RBP12.72□□□□□ -0.37
PFDN1-202ENST00000507185 CCDC85AQ96PX6 553 aaPredicted RBP12.72□□□□□ -0.37
PFDN1-202ENST00000507185 OSBPL3Q9H4L5 887 aa12.72□□□□□ -0.37
PFDN1-202ENST00000507185 HECW2Q9P2P5 1572 aa12.72□□□□□ -0.37
PFDN1-202ENST00000507185 EPRSP07814 1512 aaKnown RBP12.72□□□□□ -0.37
PFDN1-202ENST00000507185 TRAK2O60296 914 aa12.71□□□□□ -0.37
PFDN1-202ENST00000507185 MYCP01106 439 aaPredicted RBP12.71□□□□□ -0.37
PFDN1-202ENST00000507185 WASHC4Q2M389 1173 aa12.71□□□□□ -0.37
PFDN1-202ENST00000507185 SLFNL1Q499Z3 407 aa12.71□□□□□ -0.37
PFDN1-202ENST00000507185 HOMEZQ8IX15 550 aa12.71□□□□□ -0.37
PFDN1-202ENST00000507185 GLI2P10070 1586 aa12.7□□□□□ -0.38
PFDN1-202ENST00000507185 IQGAP2Q13576 1575 aa12.7□□□□□ -0.38
PFDN1-202ENST00000507185 SENP3-EIF4A1A0A087X0R7 540 aa12.7□□□□□ -0.38
PFDN1-202ENST00000507185 GPR161Q8N6U8 529 aaKnown RBP12.7□□□□□ -0.38
PFDN1-202ENST00000507185 CDCA7Q9BWT1 371 aaPredicted RBP12.7□□□□□ -0.38
PFDN1-202ENST00000507185 CDC14CA4D256 554 aa12.69□□□□□ -0.38
PFDN1-202ENST00000507185 ARID3CA6NKF2 412 aa12.69□□□□□ -0.38
PFDN1-202ENST00000507185 RHOQP17081 205 aa12.69□□□□□ -0.38
PFDN1-202ENST00000507185 LORP23490 312 aaPredicted RBP12.69□□□□□ -0.38
PFDN1-202ENST00000507185 CLN3Q13286 438 aa12.69□□□□□ -0.38
PFDN1-202ENST00000507185 SLC27A3Q5K4L6 730 aa12.69□□□□□ -0.38
PFDN1-202ENST00000507185 VWA5B2Q8N398 1253 aa12.69□□□□□ -0.38
PFDN1-202ENST00000507185 ARHGEF10LQ9HCE6 1279 aa12.69□□□□□ -0.38
PFDN1-202ENST00000507185 UHRF1BP1LA0JNW5 1464 aa12.69□□□□□ -0.38
PFDN1-202ENST00000507185 SV2AQ7L0J3 742 aa12.68□□□□□ -0.38
PFDN1-202ENST00000507185 RNF135Q8IUD6 432 aa12.68□□□□□ -0.38
PFDN1-202ENST00000507185 GNRH1P01148 92 aa12.67□□□□□ -0.38
PFDN1-202ENST00000507185 DOLKQ9UPQ8 538 aa12.67□□□□□ -0.38
PFDN1-202ENST00000507185 PHTF2Q8N3S3 785 aa12.66□□□□□ -0.38
PFDN1-202ENST00000507185 PPRC1Q5VV67 1664 aaKnown RBP12.66□□□□□ -0.38
PFDN1-202ENST00000507185 DISP1Q96F81 1524 aa12.66□□□□□ -0.38
PFDN1-202ENST00000507185 USP4Q13107 963 aa12.65□□□□□ -0.38
PFDN1-202ENST00000507185 SEMA3FQ13275 785 aa12.65□□□□□ -0.38
PFDN1-202ENST00000507185 TSGA10IPQ3SY00 556 aa12.65□□□□□ -0.38
PFDN1-202ENST00000507185 CNTNAP3BQ96NU0 1288 aa12.65□□□□□ -0.38
PFDN1-202ENST00000507185 COL25A1Q9BXS0 654 aaPredicted RBP12.65□□□□□ -0.38
PFDN1-202ENST00000507185 CNTNAP3Q9BZ76 1288 aa12.65□□□□□ -0.38
PFDN1-202ENST00000507185 RAB6BQ9NRW1 208 aa12.65□□□□□ -0.38
PFDN1-202ENST00000507185 KDM5BQ9UGL1 1544 aa12.64□□□□□ -0.39
PFDN1-202ENST00000507185 GRIP2Q9C0E4 1043 aa12.64□□□□□ -0.39
PFDN1-202ENST00000507185 WDR7Q9Y4E6 1490 aa12.64□□□□□ -0.39
PFDN1-202ENST00000507185 CD109Q6YHK3 1445 aa12.63□□□□□ -0.39
PFDN1-202ENST00000507185 POU4F2Q12837 409 aa12.63□□□□□ -0.39
PFDN1-202ENST00000507185 CNKSR1Q969H4 720 aa12.63□□□□□ -0.39
PFDN1-202ENST00000507185 COG6Q9Y2V7 657 aa12.63□□□□□ -0.39
PFDN1-202ENST00000507185 SOX11P35716 441 aa12.62□□□□□ -0.39
PFDN1-202ENST00000507185 KRT76Q01546 638 aa12.62□□□□□ -0.39
PFDN1-202ENST00000507185 OXLD1Q5BKU9 147 aa12.62□□□□□ -0.39
PFDN1-202ENST00000507185 ESYT1Q9BSJ8 1104 aa12.62□□□□□ -0.39
PFDN1-202ENST00000507185 RAPGEF2Q9Y4G8 1499 aa12.61□□□□□ -0.39
PFDN1-202ENST00000507185 SIRT1Q96EB6 747 aa12.61□□□□□ -0.39
PFDN1-202ENST00000507185 ZCCHC11Q5TAX3 1644 aaKnown RBP12.61□□□□□ -0.39
PFDN1-202ENST00000507185 MAP3K4Q9Y6R4 1608 aa12.61□□□□□ -0.39
PFDN1-202ENST00000507185 IL2RAP01589 272 aa12.6□□□□□ -0.39
PFDN1-202ENST00000507185 WWC1Q8IX03 1113 aa12.6□□□□□ -0.39
PFDN1-202ENST00000507185 FAM9AQ8IZU1 332 aaPredicted RBP12.6□□□□□ -0.39
PFDN1-202ENST00000507185 FBXO41Q8TF61 875 aa12.6□□□□□ -0.39
PFDN1-202ENST00000507185 CUEDC1Q9NWM3 386 aaPredicted RBP12.6□□□□□ -0.39
PFDN1-202ENST00000507185 ARID4BQ4LE39 1312 aaPredicted RBP12.6□□□□□ -0.39
PFDN1-202ENST00000507185 CENPCQ03188 943 aa12.59□□□□□ -0.39
PFDN1-202ENST00000507185 ESCO1Q5FWF5 840 aa12.59□□□□□ -0.39
PFDN1-202ENST00000507185 RNFT1Q5M7Z0 435 aa12.59□□□□□ -0.39
PFDN1-202ENST00000507185 NBPF10Q6P3W6 841 aaKnown RBP12.59□□□□□ -0.39
PFDN1-202ENST00000507185 RIPOR1Q6ZS17 1223 aa12.59□□□□□ -0.39
PFDN1-202ENST00000507185 NBPF15Q8N660 670 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms