RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 CNPY2Q9Y2B0 182 aa11.61□□□□□ -0.55
PHF3-208ENST00000506783 MAP3K19Q56UN5 1328 aa11.61□□□□□ -0.55
PHF3-208ENST00000506783 NINLQ9Y2I6 1382 aa11.61□□□□□ -0.55
PHF3-208ENST00000506783 HCLS1P14317 486 aaPredicted RBP11.61□□□□□ -0.55
PHF3-208ENST00000506783 ANKRD44Q8N8A2 993 aa11.61□□□□□ -0.55
PHF3-208ENST00000506783 JAKMIP1Q96N16 626 aaKnown RBP11.61□□□□□ -0.55
PHF3-208ENST00000506783 NLRP2Q9NX02 1062 aa11.61□□□□□ -0.55
PHF3-208ENST00000506783 CHPF2Q9P2E5 772 aa11.61□□□□□ -0.55
PHF3-208ENST00000506783 CT47B1P0C2W7 299 aaPredicted RBP11.6□□□□□ -0.55
PHF3-208ENST00000506783 GUCY1B3Q02153 619 aa11.6□□□□□ -0.55
PHF3-208ENST00000506783 NUTM2BA6NNL0 878 aaPredicted RBP11.6□□□□□ -0.55
PHF3-208ENST00000506783 NUTM2EB1AL46 878 aaPredicted RBP11.6□□□□□ -0.55
PHF3-208ENST00000506783 NUTM2AQ8IVF1 878 aaPredicted RBP11.6□□□□□ -0.55
PHF3-208ENST00000506783 PHF23Q9BUL5 403 aaPredicted RBP11.6□□□□□ -0.55
PHF3-208ENST00000506783 TMEM63CQ9P1W3 806 aa11.6□□□□□ -0.55
PHF3-208ENST00000506783 RBM25P49756 843 aaKnown RBP11.6□□□□□ -0.55
PHF3-208ENST00000506783 CCDC30Q5VVM6 783 aa11.59□□□□□ -0.55
PHF3-208ENST00000506783 ZNF530Q6P9A1 599 aaPredicted RBP11.59□□□□□ -0.55
PHF3-208ENST00000506783 RPAP2Q8IXW5 612 aaPredicted RBP11.59□□□□□ -0.55
PHF3-208ENST00000506783 CABLES1Q8TDN4 633 aa11.59□□□□□ -0.55
PHF3-208ENST00000506783 YTHDC2Q9H6S0 1430 aaKnown RBP11.59□□□□□ -0.55
PHF3-208ENST00000506783 TTC21BQ7Z4L5 1316 aa11.59□□□□□ -0.55
PHF3-208ENST00000506783 ATP5J2-PTCD1G3V325 749 aa11.59□□□□□ -0.55
PHF3-208ENST00000506783 PTCD1O75127 700 aaKnown RBP11.59□□□□□ -0.55
PHF3-208ENST00000506783 FMNL2Q96PY5 1086 aa11.59□□□□□ -0.55
PHF3-208ENST00000506783 ABCC11Q96J66 1382 aa11.59□□□□□ -0.55
PHF3-208ENST00000506783 A0A087WWV3 80 aa11.59□□□□□ -0.55
PHF3-208ENST00000506783 AAMPQ13685 434 aa11.59□□□□□ -0.55
PHF3-208ENST00000506783 AACSQ86V21 672 aa11.59□□□□□ -0.55
PHF3-208ENST00000506783 STRN4Q9NRL3 753 aa11.59□□□□□ -0.55
PHF3-208ENST00000506783 NPC1L1Q9UHC9 1359 aa11.58□□□□□ -0.55
PHF3-208ENST00000506783 ORAI2Q96SN7 254 aa11.58□□□□□ -0.56
PHF3-208ENST00000506783 EIF2AK4Q9P2K8 1649 aaKnown RBP11.58□□□□□ -0.56
PHF3-208ENST00000506783 EVA1CP58658 441 aa11.58□□□□□ -0.56
PHF3-208ENST00000506783 GPT2Q8TD30 523 aa11.58□□□□□ -0.56
PHF3-208ENST00000506783 SRCIN1Q9C0H9 1055 aa11.58□□□□□ -0.56
PHF3-208ENST00000506783 IL25Q9H293 177 aa11.58□□□□□ -0.56
PHF3-208ENST00000506783 METP08581 1390 aa11.58□□□□□ -0.56
PHF3-208ENST00000506783 RIC3Q7Z5B4 369 aa11.58□□□□□ -0.56
PHF3-208ENST00000506783 CROCC2H7BZ55 1655 aa11.58□□□□□ -0.56
PHF3-208ENST00000506783 CHST3Q7LGC8 479 aa11.57□□□□□ -0.56
PHF3-208ENST00000506783 ERCC4Q92889 916 aaPredicted RBP11.57□□□□□ -0.56
PHF3-208ENST00000506783 PHF8Q9UPP1 1060 aa11.57□□□□□ -0.56
PHF3-208ENST00000506783 PRR36Q9H6K5 1346 aa11.57□□□□□ -0.56
PHF3-208ENST00000506783 CHGBP05060 677 aa11.57□□□□□ -0.56
PHF3-208ENST00000506783 FSD1Q9BTV5 496 aa11.57□□□□□ -0.56
PHF3-208ENST00000506783 E9PCH4 1651 aa11.57□□□□□ -0.56
PHF3-208ENST00000506783 ABCA9Q8IUA7 1624 aa11.57□□□□□ -0.56
PHF3-208ENST00000506783 GNAT3A8MTJ3 354 aa11.57□□□□□ -0.56
PHF3-208ENST00000506783 KIAA2012Q0VF49 1180 aa11.57□□□□□ -0.56
PHF3-208ENST00000506783 USP48Q86UV5 1035 aa11.57□□□□□ -0.56
PHF3-208ENST00000506783 UQCRHLA0A096LP55 91 aa11.56□□□□□ -0.56
PHF3-208ENST00000506783 BTBD11A6QL63 1104 aa11.56□□□□□ -0.56
PHF3-208ENST00000506783 UQCRHP07919 91 aa11.56□□□□□ -0.56
PHF3-208ENST00000506783 C1orf141Q5JVX7 400 aa11.56□□□□□ -0.56
PHF3-208ENST00000506783 GNAI3P08754 354 aa11.56□□□□□ -0.56
PHF3-208ENST00000506783 SLFNL1Q499Z3 407 aa11.56□□□□□ -0.56
PHF3-208ENST00000506783 CLASRPQ8N2M8 674 aaKnown RBP11.56□□□□□ -0.56
PHF3-208ENST00000506783 BICD2Q8TD16 824 aa11.56□□□□□ -0.56
PHF3-208ENST00000506783 ZNF692Q9BU19 519 aaPredicted RBP11.56□□□□□ -0.56
PHF3-208ENST00000506783 LMBRD1Q9NUN5 540 aa11.56□□□□□ -0.56
PHF3-208ENST00000506783 KDM5AP29375 1690 aaKnown RBP11.56□□□□□ -0.56
PHF3-208ENST00000506783 CLCN1P35523 988 aa11.55□□□□□ -0.56
PHF3-208ENST00000506783 CHRNA2Q15822 529 aa11.55□□□□□ -0.56
PHF3-208ENST00000506783 HSP90AB3PQ58FF7 597 aa11.55□□□□□ -0.56
PHF3-208ENST00000506783 ZSCAN30Q86W11 494 aa11.55□□□□□ -0.56
PHF3-208ENST00000506783 ESYT1Q9BSJ8 1104 aa11.55□□□□□ -0.56
PHF3-208ENST00000506783 DNM1Q05193 864 aaKnown RBP11.55□□□□□ -0.56
PHF3-208ENST00000506783 KLHL40Q2TBA0 621 aa11.55□□□□□ -0.56
PHF3-208ENST00000506783 HECW2Q9P2P5 1572 aa11.54□□□□□ -0.56
PHF3-208ENST00000506783 FSD2A1L4K1 749 aa11.54□□□□□ -0.56
PHF3-208ENST00000506783 CCDC173Q0VFZ6 552 aa11.54□□□□□ -0.56
PHF3-208ENST00000506783 G3BP1Q13283 466 aaKnown RBP eCLIP11.54□□□□□ -0.56
PHF3-208ENST00000506783 ISM2Q6H9L7 571 aa11.54□□□□□ -0.56
PHF3-208ENST00000506783 SNX21Q969T3 373 aa11.54□□□□□ -0.56
PHF3-208ENST00000506783 CCT4P50991 539 aaKnown RBP11.54□□□□□ -0.56
PHF3-208ENST00000506783 RASEFQ8IZ41 740 aa11.54□□□□□ -0.56
PHF3-208ENST00000506783 SYTL4Q96C24 671 aaPredicted RBP11.54□□□□□ -0.56
PHF3-208ENST00000506783 ZMYND15Q9H091 742 aa11.54□□□□□ -0.56
PHF3-208ENST00000506783 TSPY26PQ9H489 355 aa11.54□□□□□ -0.56
PHF3-208ENST00000506783 MADDQ8WXG6 1647 aa11.54□□□□□ -0.56
PHF3-208ENST00000506783 POLR1AO95602 1720 aaPredicted RBP11.54□□□□□ -0.56
PHF3-208ENST00000506783 IL17REQ8NFR9 667 aa11.53□□□□□ -0.56
PHF3-208ENST00000506783 SNRKQ9NRH2 765 aa11.53□□□□□ -0.56
PHF3-208ENST00000506783 IL16Q14005 1332 aa11.53□□□□□ -0.56
PHF3-208ENST00000506783 TMEM2Q9UHN6 1383 aa11.53□□□□□ -0.56
PHF3-208ENST00000506783 CHL1O00533 1208 aa11.53□□□□□ -0.56
PHF3-208ENST00000506783 CHMLP26374 656 aa11.53□□□□□ -0.56
PHF3-208ENST00000506783 RHPN1Q8TCX5 695 aa11.53□□□□□ -0.56
PHF3-208ENST00000506783 MAP3K2Q9Y2U5 619 aa11.53□□□□□ -0.56
PHF3-208ENST00000506783 H3BQV1 296 aa11.53□□□□□ -0.56
PHF3-208ENST00000506783 IFFO2Q5TF58 517 aa11.53□□□□□ -0.56
PHF3-208ENST00000506783 CREBRFQ8IUR6 639 aa11.53□□□□□ -0.56
PHF3-208ENST00000506783 ADAMTS2O95450 1211 aa11.52□□□□□ -0.56
PHF3-208ENST00000506783 CCT2P78371 535 aaKnown RBP11.52□□□□□ -0.56
PHF3-208ENST00000506783 PROSER3Q2NL68 480 aa11.52□□□□□ -0.56
PHF3-208ENST00000506783 LARP1BQ659C4 914 aaKnown RBP11.52□□□□□ -0.56
PHF3-208ENST00000506783 FAM227BQ96M60 508 aa11.52□□□□□ -0.56
PHF3-208ENST00000506783 CIZ1Q9ULV3 898 aaPredicted RBP11.52□□□□□ -0.56
PHF3-208ENST00000506783 SPDYE4A6NLX3 237 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms