RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 GDPD2Q9HCC8 539 aa20.69■□□□□ 0.9
SQSTM1-211ENST00000506690 AGLP35573 1532 aa20.69■□□□□ 0.9
SQSTM1-211ENST00000506690 CCDC183Q5T5S1 534 aa20.69■□□□□ 0.9
SQSTM1-211ENST00000506690 PALD1Q9ULE6 856 aa20.69■□□□□ 0.9
SQSTM1-211ENST00000506690 ESYT1Q9BSJ8 1104 aa20.68■□□□□ 0.9
SQSTM1-211ENST00000506690 SLC52A1Q9NWF4 448 aa20.68■□□□□ 0.9
SQSTM1-211ENST00000506690 WDR33Q9C0J8 1336 aaKnown RBP20.68■□□□□ 0.9
SQSTM1-211ENST00000506690 MCCP23508 829 aa20.67■□□□□ 0.9
SQSTM1-211ENST00000506690 MEIS3Q99687 375 aa20.67■□□□□ 0.9
SQSTM1-211ENST00000506690 LETM1O95202 739 aaPredicted RBP20.67■□□□□ 0.9
SQSTM1-211ENST00000506690 PRAM1Q96QH2 718 aa20.67■□□□□ 0.9
SQSTM1-211ENST00000506690 CABP1Q9NZU7 370 aa20.67■□□□□ 0.9
SQSTM1-211ENST00000506690 FAM83GA6ND36 823 aa20.66■□□□□ 0.9
SQSTM1-211ENST00000506690 MX1P20591 662 aa20.66■□□□□ 0.9
SQSTM1-211ENST00000506690 FBXO31Q5XUX0 539 aaPredicted RBP20.66■□□□□ 0.9
SQSTM1-211ENST00000506690 PPP6R1Q9UPN7 881 aa20.66■□□□□ 0.9
SQSTM1-211ENST00000506690 FAM177BA6PVY3 158 aa20.65■□□□□ 0.9
SQSTM1-211ENST00000506690 KDM4AO75164 1064 aa20.65■□□□□ 0.9
SQSTM1-211ENST00000506690 HCLS1P14317 486 aaPredicted RBP20.65■□□□□ 0.9
SQSTM1-211ENST00000506690 RPAP1Q9BWH6 1393 aaPredicted RBP20.65■□□□□ 0.9
SQSTM1-211ENST00000506690 CDK12Q9NYV4 1490 aaPredicted RBP20.65■□□□□ 0.9
SQSTM1-211ENST00000506690 MLECQ14165 292 aa20.65■□□□□ 0.9
SQSTM1-211ENST00000506690 KRT24Q2M2I5 525 aa20.65■□□□□ 0.9
SQSTM1-211ENST00000506690 FOXD4L6Q3SYB3 417 aaPredicted RBP20.65■□□□□ 0.9
SQSTM1-211ENST00000506690 FOXD4L3Q6VB84 417 aaPredicted RBP20.65■□□□□ 0.9
SQSTM1-211ENST00000506690 SALL3Q9BXA9 1300 aa20.65■□□□□ 0.9
SQSTM1-211ENST00000506690 SSH2Q76I76 1423 aa20.64■□□□□ 0.9
SQSTM1-211ENST00000506690 PTPRCP08575 1304 aa20.64■□□□□ 0.9
SQSTM1-211ENST00000506690 HMMRO75330 724 aa20.64■□□□□ 0.89
SQSTM1-211ENST00000506690 KLHL34Q8N239 644 aa20.64■□□□□ 0.89
SQSTM1-211ENST00000506690 KIAA1524Q8TCG1 905 aa20.64■□□□□ 0.89
SQSTM1-211ENST00000506690 KIAA0232Q92628 1395 aa20.64■□□□□ 0.89
SQSTM1-211ENST00000506690 HAP1P54257 671 aaPredicted RBP20.64■□□□□ 0.89
SQSTM1-211ENST00000506690 PDCL2Q8N4E4 241 aa20.64■□□□□ 0.89
SQSTM1-211ENST00000506690 ANKRD7Q92527 254 aa20.64■□□□□ 0.89
SQSTM1-211ENST00000506690 CDK19Q9BWU1 502 aa20.64■□□□□ 0.89
SQSTM1-211ENST00000506690 NOL8Q76FK4 1167 aaKnown RBP20.63■□□□□ 0.89
SQSTM1-211ENST00000506690 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.63■□□□□ 0.89
SQSTM1-211ENST00000506690 SRCIN1Q9C0H9 1055 aa20.63■□□□□ 0.89
SQSTM1-211ENST00000506690 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
SQSTM1-211ENST00000506690 EMILIN1Q9Y6C2 1016 aa20.63■□□□□ 0.89
SQSTM1-211ENST00000506690 DIAPH3Q9NSV4 1193 aa20.63■□□□□ 0.89
SQSTM1-211ENST00000506690 PLEKHG5O94827 1062 aa20.62■□□□□ 0.89
SQSTM1-211ENST00000506690 DCTN1Q14203 1278 aa20.62■□□□□ 0.89
SQSTM1-211ENST00000506690 FUCA2Q9BTY2 467 aa20.62■□□□□ 0.89
SQSTM1-211ENST00000506690 ATP7BP35670 1465 aa20.61■□□□□ 0.89
SQSTM1-211ENST00000506690 CTIFO43310 598 aaKnown RBP20.61■□□□□ 0.89
SQSTM1-211ENST00000506690 CHMLP26374 656 aa20.61■□□□□ 0.89
SQSTM1-211ENST00000506690 KCNF1Q9H3M0 494 aa20.61■□□□□ 0.89
SQSTM1-211ENST00000506690 A0A0U1RQG5 324 aaPredicted RBP20.6■□□□□ 0.89
SQSTM1-211ENST00000506690 RIOK3O14730 519 aaKnown RBP20.6■□□□□ 0.89
SQSTM1-211ENST00000506690 UBE2HP62256 183 aa20.6■□□□□ 0.89
SQSTM1-211ENST00000506690 ANO2Q9NQ90 1003 aa20.6■□□□□ 0.89
SQSTM1-211ENST00000506690 TPM3P06753 285 aa20.59■□□□□ 0.89
SQSTM1-211ENST00000506690 CNPY2Q9Y2B0 182 aa20.59■□□□□ 0.89
SQSTM1-211ENST00000506690 PREX1Q8TCU6 1659 aa20.59■□□□□ 0.89
SQSTM1-211ENST00000506690 UPF3BQ9BZI7 483 aaKnown RBP20.59■□□□□ 0.89
SQSTM1-211ENST00000506690 CHAF1AQ13111 956 aaPredicted RBP20.58■□□□□ 0.89
SQSTM1-211ENST00000506690 PYCARDQ9ULZ3 195 aa20.58■□□□□ 0.89
SQSTM1-211ENST00000506690 AP5Z1O43299 807 aa20.58■□□□□ 0.88
SQSTM1-211ENST00000506690 TSHZ3Q63HK5 1081 aa20.58■□□□□ 0.88
SQSTM1-211ENST00000506690 STAG3Q9UJ98 1225 aa20.58■□□□□ 0.88
SQSTM1-211ENST00000506690 AATKQ6ZMQ8 1374 aa20.57■□□□□ 0.88
SQSTM1-211ENST00000506690 SPDYE4A6NLX3 237 aa20.57■□□□□ 0.88
SQSTM1-211ENST00000506690 EPB41L2O43491 1005 aaKnown RBP20.57■□□□□ 0.88
SQSTM1-211ENST00000506690 CHL1O00533 1208 aa20.57■□□□□ 0.88
SQSTM1-211ENST00000506690 MYO5BQ9ULV0 1848 aa20.57■□□□□ 0.88
SQSTM1-211ENST00000506690 ZSCAN22P10073 491 aaPredicted RBP20.56■□□□□ 0.88
SQSTM1-211ENST00000506690 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.56■□□□□ 0.88
SQSTM1-211ENST00000506690 U2AF2P26368 475 aaKnown RBP eCLIP20.56■□□□□ 0.88
SQSTM1-211ENST00000506690 FEZ1Q99689 392 aa20.55■□□□□ 0.88
SQSTM1-211ENST00000506690 EXOC6BQ9Y2D4 811 aa20.54■□□□□ 0.88
SQSTM1-211ENST00000506690 HSPA4P34932 840 aa20.54■□□□□ 0.88
SQSTM1-211ENST00000506690 LRRCC1Q9C099 1032 aa20.54■□□□□ 0.88
SQSTM1-211ENST00000506690 STAP2Q9UGK3 403 aa20.53■□□□□ 0.88
SQSTM1-211ENST00000506690 GIMAP6Q6P9H5 292 aa20.53■□□□□ 0.88
SQSTM1-211ENST00000506690 RILPL2Q969X0 211 aa20.53■□□□□ 0.88
SQSTM1-211ENST00000506690 TRIM6-TRIM34B2RNG4 842 aa20.52■□□□□ 0.88
SQSTM1-211ENST00000506690 STX6O43752 255 aa20.52■□□□□ 0.88
SQSTM1-211ENST00000506690 TRHP20396 242 aaPredicted RBP20.52■□□□□ 0.88
SQSTM1-211ENST00000506690 TMEM131LA2VDJ0 1609 aa20.52■□□□□ 0.88
SQSTM1-211ENST00000506690 CCT4P50991 539 aaKnown RBP20.52■□□□□ 0.87
SQSTM1-211ENST00000506690 PLCB2Q00722 1185 aa20.52■□□□□ 0.87
SQSTM1-211ENST00000506690 ESF1Q9H501 851 aaKnown RBP20.52■□□□□ 0.87
SQSTM1-211ENST00000506690 EDC4Q6P2E9 1401 aaKnown RBP20.52■□□□□ 0.87
SQSTM1-211ENST00000506690 GOLGA6L6A8MZA4 724 aa20.51■□□□□ 0.87
SQSTM1-211ENST00000506690 F13A1P00488 732 aa20.51■□□□□ 0.87
SQSTM1-211ENST00000506690 SLC4A2P04920 1241 aa20.51■□□□□ 0.87
SQSTM1-211ENST00000506690 SYT1P21579 422 aa20.51■□□□□ 0.87
SQSTM1-211ENST00000506690 SYCP1Q15431 976 aa20.51■□□□□ 0.87
SQSTM1-211ENST00000506690 IL25Q9H293 177 aa20.51■□□□□ 0.87
SQSTM1-211ENST00000506690 ATP6V1DQ9Y5K8 247 aa20.51■□□□□ 0.87
SQSTM1-211ENST00000506690 GNAI2P04899 355 aa20.5■□□□□ 0.87
SQSTM1-211ENST00000506690 UNC5CLQ8IV45 518 aa20.5■□□□□ 0.87
SQSTM1-211ENST00000506690 TTC14Q96N46 770 aa20.5■□□□□ 0.87
SQSTM1-211ENST00000506690 OGFRQ9NZT2 677 aa20.5■□□□□ 0.87
SQSTM1-211ENST00000506690 NCBP1Q09161 790 aaKnown RBP20.49■□□□□ 0.87
SQSTM1-211ENST00000506690 NME9Q86XW9 330 aa20.49■□□□□ 0.87
SQSTM1-211ENST00000506690 ALKQ9UM73 1620 aa20.49■□□□□ 0.87
SQSTM1-211ENST00000506690 FIBPO43427 364 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms