RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 SNRKQ9NRH2 765 aa7.47□□□□□ -1.21
SMAD1-205ENST00000506626 NSFL1CQ9UNZ2 370 aaKnown RBP7.46□□□□□ -1.22
SMAD1-205ENST00000506626 TRAK2O60296 914 aa7.45□□□□□ -1.22
SMAD1-205ENST00000506626 MAP2K3P46734 347 aa7.45□□□□□ -1.22
SMAD1-205ENST00000506626 CLN3Q13286 438 aa7.45□□□□□ -1.22
SMAD1-205ENST00000506626 NLRP3Q96P20 1036 aa7.45□□□□□ -1.22
SMAD1-205ENST00000506626 OSBPL3Q9H4L5 887 aa7.45□□□□□ -1.22
SMAD1-205ENST00000506626 THBS1P07996 1170 aa7.44□□□□□ -1.22
SMAD1-205ENST00000506626 SLC27A3Q5K4L6 730 aa7.44□□□□□ -1.22
SMAD1-205ENST00000506626 GRIP2Q9C0E4 1043 aa7.44□□□□□ -1.22
SMAD1-205ENST00000506626 ARHGEF10LQ9HCE6 1279 aa7.44□□□□□ -1.22
SMAD1-205ENST00000506626 POU4F2Q12837 409 aa7.43□□□□□ -1.22
SMAD1-205ENST00000506626 LINC00114Q6XXX2 140 aa7.43□□□□□ -1.22
SMAD1-205ENST00000506626 SUV39H2Q9H5I1 410 aa7.43□□□□□ -1.22
SMAD1-205ENST00000506626 C1QTNF9BB2RNN3 333 aa7.42□□□□□ -1.22
SMAD1-205ENST00000506626 NBPF10Q6P3W6 841 aaKnown RBP7.42□□□□□ -1.22
SMAD1-205ENST00000506626 CD163Q86VB7 1156 aa7.42□□□□□ -1.22
SMAD1-205ENST00000506626 NBPF15Q8N660 670 aa7.42□□□□□ -1.22
SMAD1-205ENST00000506626 GAS2L1Q99501 681 aaPredicted RBP7.42□□□□□ -1.22
SMAD1-205ENST00000506626 ESF1Q9H501 851 aaKnown RBP7.42□□□□□ -1.22
SMAD1-205ENST00000506626 SPATA31C2B4DYI2 1134 aa7.41□□□□□ -1.22
SMAD1-205ENST00000506626 GRIN2CQ14957 1233 aa7.41□□□□□ -1.22
SMAD1-205ENST00000506626 KLRG1Q96E93 195 aa7.41□□□□□ -1.22
SMAD1-205ENST00000506626 CCDC85AQ96PX6 553 aaPredicted RBP7.41□□□□□ -1.22
SMAD1-205ENST00000506626 CFHR5Q9BXR6 569 aa7.41□□□□□ -1.22
SMAD1-205ENST00000506626 NUCKS1Q9H1E3 243 aaKnown RBP7.41□□□□□ -1.22
SMAD1-205ENST00000506626 RAB6BQ9NRW1 208 aa7.41□□□□□ -1.22
SMAD1-205ENST00000506626 CEP126Q9P2H0 1117 aa7.41□□□□□ -1.22
SMAD1-205ENST00000506626 TBC1D2BQ9UPU7 963 aa7.41□□□□□ -1.22
SMAD1-205ENST00000506626 GNRH1P01148 92 aa7.4□□□□□ -1.22
SMAD1-205ENST00000506626 CHRNA4P43681 627 aa7.4□□□□□ -1.22
SMAD1-205ENST00000506626 TPRNQ4KMQ1 711 aa7.4□□□□□ -1.22
SMAD1-205ENST00000506626 WDR44Q5JSH3 913 aa7.4□□□□□ -1.22
SMAD1-205ENST00000506626 CDCA7Q9BWT1 371 aaPredicted RBP7.4□□□□□ -1.22
SMAD1-205ENST00000506626 WASLO00401 505 aaPredicted RBP7.39□□□□□ -1.23
SMAD1-205ENST00000506626 MYCP01106 439 aaPredicted RBP7.39□□□□□ -1.23
SMAD1-205ENST00000506626 IL2RAP01589 272 aa7.39□□□□□ -1.23
SMAD1-205ENST00000506626 TAS1R3Q7RTX0 852 aa7.39□□□□□ -1.23
SMAD1-205ENST00000506626 EDARADDQ8WWZ3 215 aa7.39□□□□□ -1.23
SMAD1-205ENST00000506626 RRAGCQ9HB90 399 aa7.39□□□□□ -1.23
SMAD1-205ENST00000506626 GDF2Q9UK05 429 aaPredicted RBP7.39□□□□□ -1.23
SMAD1-205ENST00000506626 CNKSR1Q969H4 720 aa7.38□□□□□ -1.23
SMAD1-205ENST00000506626 ESYT1Q9BSJ8 1104 aa7.38□□□□□ -1.23
SMAD1-205ENST00000506626 TIMMDC1Q9NPL8 285 aa7.38□□□□□ -1.23
SMAD1-205ENST00000506626 F11P03951 625 aa7.37□□□□□ -1.23
SMAD1-205ENST00000506626 UBAP2LQ14157 1087 aaKnown RBP7.37□□□□□ -1.23
SMAD1-205ENST00000506626 ZMYM1Q5SVZ6 1142 aa7.37□□□□□ -1.23
SMAD1-205ENST00000506626 KRTAP9-9Q9BYP9 154 aa7.37□□□□□ -1.23
SMAD1-205ENST00000506626 KRTAP9-4Q9BYQ2 154 aa7.37□□□□□ -1.23
SMAD1-205ENST00000506626 GNB5O14775 395 aa7.36□□□□□ -1.23
SMAD1-205ENST00000506626 EIF4G2P78344 907 aaKnown RBP eCLIP7.36□□□□□ -1.23
SMAD1-205ENST00000506626 CENPCQ03188 943 aa7.36□□□□□ -1.23
SMAD1-205ENST00000506626 IRF5Q13568 498 aa7.36□□□□□ -1.23
SMAD1-205ENST00000506626 GOLGA6L1Q8N7Z2 621 aa7.36□□□□□ -1.23
SMAD1-205ENST00000506626 SEMA6BQ9H3T3 888 aa7.36□□□□□ -1.23
SMAD1-205ENST00000506626 PRM3Q9NNZ6 103 aa7.36□□□□□ -1.23
SMAD1-205ENST00000506626 HRH3Q9Y5N1 445 aa7.36□□□□□ -1.23
SMAD1-205ENST00000506626 DGKGP49619 791 aa7.35□□□□□ -1.23
SMAD1-205ENST00000506626 FOXD4L6Q3SYB3 417 aaPredicted RBP7.35□□□□□ -1.23
SMAD1-205ENST00000506626 FOXD4L3Q6VB84 417 aaPredicted RBP7.35□□□□□ -1.23
SMAD1-205ENST00000506626 SLCO4C1Q6ZQN7 724 aa7.35□□□□□ -1.23
SMAD1-205ENST00000506626 XAGE2Q96GT9 111 aa7.35□□□□□ -1.23
SMAD1-205ENST00000506626 ZSCAN10Q96SZ4 725 aaPredicted RBP7.35□□□□□ -1.23
SMAD1-205ENST00000506626 FHDC1Q9C0D6 1143 aaPredicted RBP7.35□□□□□ -1.23
SMAD1-205ENST00000506626 DOLKQ9UPQ8 538 aa7.35□□□□□ -1.23
SMAD1-205ENST00000506626 TSGA10IPQ3SY00 556 aa7.34□□□□□ -1.23
SMAD1-205ENST00000506626 PHTF2Q8N3S3 785 aa7.34□□□□□ -1.23
SMAD1-205ENST00000506626 GPAMQ9HCL2 828 aa7.34□□□□□ -1.23
SMAD1-205ENST00000506626 PHKA2P46019 1235 aa7.33□□□□□ -1.24
SMAD1-205ENST00000506626 SLFNL1Q499Z3 407 aa7.33□□□□□ -1.24
SMAD1-205ENST00000506626 RNF135Q8IUD6 432 aa7.33□□□□□ -1.24
SMAD1-205ENST00000506626 PHF24Q9UPV7 400 aa7.33□□□□□ -1.24
SMAD1-205ENST00000506626 A0A1B0GTH6 734 aa7.32□□□□□ -1.24
SMAD1-205ENST00000506626 PIK3R2O00459 728 aa7.32□□□□□ -1.24
SMAD1-205ENST00000506626 C2CD2LO14523 706 aa7.32□□□□□ -1.24
SMAD1-205ENST00000506626 GTF2E1P29083 439 aaPredicted RBP7.32□□□□□ -1.24
SMAD1-205ENST00000506626 DOC2BQ14184 412 aa7.32□□□□□ -1.24
SMAD1-205ENST00000506626 ESCO1Q5FWF5 840 aa7.32□□□□□ -1.24
SMAD1-205ENST00000506626 GNASQ5JWF2 1037 aa7.32□□□□□ -1.24
SMAD1-205ENST00000506626 TMEM214Q6NUQ4 689 aaKnown RBP7.32□□□□□ -1.24
SMAD1-205ENST00000506626 ETNK1Q9HBU6 452 aa7.32□□□□□ -1.24
SMAD1-205ENST00000506626 CHIC2Q9UKJ5 165 aa7.32□□□□□ -1.24
SMAD1-205ENST00000506626 STAU1O95793 577 aaKnown RBP7.31□□□□□ -1.24
SMAD1-205ENST00000506626 AMPD1P23109 780 aa7.31□□□□□ -1.24
SMAD1-205ENST00000506626 VAC14Q08AM6 782 aa7.31□□□□□ -1.24
SMAD1-205ENST00000506626 USP4Q13107 963 aa7.31□□□□□ -1.24
SMAD1-205ENST00000506626 C4orf17Q53FE4 359 aa7.31□□□□□ -1.24
SMAD1-205ENST00000506626 OXLD1Q5BKU9 147 aa7.31□□□□□ -1.24
SMAD1-205ENST00000506626 KRTAP19-1Q8IUB9 90 aa7.31□□□□□ -1.24
SMAD1-205ENST00000506626 GDPD2Q9HCC8 539 aa7.31□□□□□ -1.24
SMAD1-205ENST00000506626 NOP53Q9NZM5 478 aaKnown RBP7.31□□□□□ -1.24
SMAD1-205ENST00000506626 GGA1Q9UJY5 639 aa7.31□□□□□ -1.24
SMAD1-205ENST00000506626 EPXP11678 715 aa7.3□□□□□ -1.24
SMAD1-205ENST00000506626 ABL2P42684 1182 aa7.3□□□□□ -1.24
SMAD1-205ENST00000506626 BTBD6Q96KE9 485 aa7.3□□□□□ -1.24
SMAD1-205ENST00000506626 LBRQ14739 615 aaKnown RBP7.29□□□□□ -1.24
SMAD1-205ENST00000506626 TLR1Q15399 786 aa7.29□□□□□ -1.24
SMAD1-205ENST00000506626 RHBDD1Q8TEB9 315 aa7.29□□□□□ -1.24
SMAD1-205ENST00000506626 SIRT1Q96EB6 747 aa7.29□□□□□ -1.24
SMAD1-205ENST00000506626 NDFIP2Q9NV92 336 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms