RNA–Protein interactions for RNA: ENST00000506444.1

FAM90A3P-201, Transcript of family with sequence similarity 90 member A3, pseudogene, humanhuman

BASIC

Gene FAM90A3P, Length 1,395 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A3P-201ENST00000506444 DUSP27Q5VZP5 1158 aa15.46■□□□□ 0.07
FAM90A3P-201ENST00000506444 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.07
FAM90A3P-201ENST00000506444 TSPYL4Q9UJ04 414 aa15.46■□□□□ 0.07
FAM90A3P-201ENST00000506444 FANCIQ9NVI1 1328 aa15.45■□□□□ 0.06
FAM90A3P-201ENST00000506444 BCL9O00512 1426 aa15.44■□□□□ 0.06
FAM90A3P-201ENST00000506444 BTBD11A6QL63 1104 aa15.44■□□□□ 0.06
FAM90A3P-201ENST00000506444 MBIPQ9NS73 344 aa15.44■□□□□ 0.06
FAM90A3P-201ENST00000506444 TMOD3Q9NYL9 352 aa15.44■□□□□ 0.06
FAM90A3P-201ENST00000506444 NFATC2IPQ8NCF5 419 aa15.43■□□□□ 0.06
FAM90A3P-201ENST00000506444 TSR2Q969E8 191 aaKnown RBP15.43■□□□□ 0.06
FAM90A3P-201ENST00000506444 KRT27Q7Z3Y8 459 aa15.42■□□□□ 0.06
FAM90A3P-201ENST00000506444 CT47B1P0C2W7 299 aaPredicted RBP15.41■□□□□ 0.06
FAM90A3P-201ENST00000506444 TTC5Q8N0Z6 440 aa15.4■□□□□ 0.06
FAM90A3P-201ENST00000506444 MIS18AQ9NYP9 233 aa15.4■□□□□ 0.06
FAM90A3P-201ENST00000506444 SIPA1L3O60292 1781 aaPredicted RBP15.4■□□□□ 0.06
FAM90A3P-201ENST00000506444 VIRMAQ69YN4 1812 aaKnown RBP15.4■□□□□ 0.06
FAM90A3P-201ENST00000506444 RGS12O14924 1447 aa15.4■□□□□ 0.06
FAM90A3P-201ENST00000506444 TOGARAM1Q9Y4F4 1720 aa15.39■□□□□ 0.05
FAM90A3P-201ENST00000506444 PRIM1P49642 420 aaKnown RBP15.39■□□□□ 0.05
FAM90A3P-201ENST00000506444 EXOSC9Q06265 439 aaKnown RBP15.39■□□□□ 0.05
FAM90A3P-201ENST00000506444 ZNF790Q6PG37 636 aa15.39■□□□□ 0.05
FAM90A3P-201ENST00000506444 FAM196AQ6ZSG2 479 aa15.39■□□□□ 0.05
FAM90A3P-201ENST00000506444 SYTL4Q96C24 671 aaPredicted RBP15.39■□□□□ 0.05
FAM90A3P-201ENST00000506444 SOS1Q07889 1333 aaPredicted RBP15.39■□□□□ 0.05
FAM90A3P-201ENST00000506444 DOT1LQ8TEK3 1739 aa15.39■□□□□ 0.05
FAM90A3P-201ENST00000506444 CHMP4AQ9BY43 222 aa15.38■□□□□ 0.05
FAM90A3P-201ENST00000506444 PIGBQ92521 554 aa15.37■□□□□ 0.05
FAM90A3P-201ENST00000506444 ZNF428Q96B54 188 aa15.37■□□□□ 0.05
FAM90A3P-201ENST00000506444 ACSBG1Q96GR2 724 aa15.37■□□□□ 0.05
FAM90A3P-201ENST00000506444 KDM3BQ7LBC6 1761 aa15.37■□□□□ 0.05
FAM90A3P-201ENST00000506444 HOXB7P09629 217 aa15.36■□□□□ 0.05
FAM90A3P-201ENST00000506444 EIF4A1P60842 406 aaKnown RBP15.36■□□□□ 0.05
FAM90A3P-201ENST00000506444 FMNL2Q96PY5 1086 aa15.36■□□□□ 0.05
FAM90A3P-201ENST00000506444 TWISTNBQ3B726 338 aaPredicted RBP15.36■□□□□ 0.05
FAM90A3P-201ENST00000506444 BRWD3Q6RI45 1802 aa15.35■□□□□ 0.05
FAM90A3P-201ENST00000506444 SLC39A6Q13433 755 aa15.35■□□□□ 0.05
FAM90A3P-201ENST00000506444 C8orf58Q8NAV2 365 aa15.35■□□□□ 0.05
FAM90A3P-201ENST00000506444 SMARCC1Q92922 1105 aaPredicted RBP15.35■□□□□ 0.05
FAM90A3P-201ENST00000506444 RCAN3Q9UKA8 241 aa15.35■□□□□ 0.05
FAM90A3P-201ENST00000506444 PAPPAQ13219 1627 aa15.34■□□□□ 0.05
FAM90A3P-201ENST00000506444 NHSQ6T4R5 1651 aa15.34■□□□□ 0.05
FAM90A3P-201ENST00000506444 KCNQ3O43525 872 aa15.34■□□□□ 0.05
FAM90A3P-201ENST00000506444 FAM182BQ5T319 152 aa15.34■□□□□ 0.05
FAM90A3P-201ENST00000506444 ATG3Q9NT62 314 aa15.34■□□□□ 0.05
FAM90A3P-201ENST00000506444 ITGB4P16144 1822 aa15.33■□□□□ 0.05
FAM90A3P-201ENST00000506444 HEG1Q9ULI3 1381 aa15.33■□□□□ 0.04
FAM90A3P-201ENST00000506444 KCNQ2O43526 872 aa15.33■□□□□ 0.04
FAM90A3P-201ENST00000506444 TSPYL6Q8N831 410 aa15.33■□□□□ 0.04
FAM90A3P-201ENST00000506444 BCL11BQ9C0K0 894 aaPredicted RBP15.33■□□□□ 0.04
FAM90A3P-201ENST00000506444 ASAP1Q9ULH1 1129 aa15.33■□□□□ 0.04
FAM90A3P-201ENST00000506444 ELL2O00472 640 aaPredicted RBP15.32■□□□□ 0.04
FAM90A3P-201ENST00000506444 VAMP4O75379 141 aa15.32■□□□□ 0.04
FAM90A3P-201ENST00000506444 SNRPA1P09661 255 aaKnown RBP15.32■□□□□ 0.04
FAM90A3P-201ENST00000506444 VSIG10Q8N0Z9 540 aa15.32■□□□□ 0.04
FAM90A3P-201ENST00000506444 ZNF496Q96IT1 587 aaPredicted RBP15.32■□□□□ 0.04
FAM90A3P-201ENST00000506444 KCPQ6ZWJ8 1503 aa15.31■□□□□ 0.04
FAM90A3P-201ENST00000506444 GIGYF1O75420 1035 aaPredicted RBP15.31■□□□□ 0.04
FAM90A3P-201ENST00000506444 KRT24Q2M2I5 525 aa15.31■□□□□ 0.04
FAM90A3P-201ENST00000506444 ALDH1L2Q3SY69 923 aa15.31■□□□□ 0.04
FAM90A3P-201ENST00000506444 PTCD1O75127 700 aaKnown RBP15.3■□□□□ 0.04
FAM90A3P-201ENST00000506444 RARSP54136 660 aaKnown RBP15.3■□□□□ 0.04
FAM90A3P-201ENST00000506444 CCDC30Q5VVM6 783 aa15.3■□□□□ 0.04
FAM90A3P-201ENST00000506444 TEX13AQ9BXU3 409 aaPredicted RBP15.3■□□□□ 0.04
FAM90A3P-201ENST00000506444 UBR2Q8IWV8 1755 aa15.3■□□□□ 0.04
FAM90A3P-201ENST00000506444 PALLDQ8WX93 1383 aa15.3■□□□□ 0.04
FAM90A3P-201ENST00000506444 HDGFL1Q5TGJ6 251 aa15.29■□□□□ 0.04
FAM90A3P-201ENST00000506444 RBM42Q9BTD8 480 aaKnown RBP15.29■□□□□ 0.04
FAM90A3P-201ENST00000506444 STK31Q9BXU1 1019 aa15.29■□□□□ 0.04
FAM90A3P-201ENST00000506444 SBF2Q86WG5 1849 aa15.28■□□□□ 0.04
FAM90A3P-201ENST00000506444 TRIM37O94972 964 aa15.27■□□□□ 0.04
FAM90A3P-201ENST00000506444 HMGB2P26583 209 aaKnown RBP15.27■□□□□ 0.04
FAM90A3P-201ENST00000506444 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.27■□□□□ 0.04
FAM90A3P-201ENST00000506444 SMC4Q9NTJ3 1288 aa15.27■□□□□ 0.04
FAM90A3P-201ENST00000506444 LOC102724428A0A0B4J2F2 783 aa15.26■□□□□ 0.03
FAM90A3P-201ENST00000506444 SIK1P57059 783 aa15.26■□□□□ 0.03
FAM90A3P-201ENST00000506444 SSH1Q8WYL5 1049 aa15.26■□□□□ 0.03
FAM90A3P-201ENST00000506444 ERBB4Q15303 1308 aa15.26■□□□□ 0.03
FAM90A3P-201ENST00000506444 KIF16BQ96L93 1317 aa15.26■□□□□ 0.03
FAM90A3P-201ENST00000506444 BTAF1O14981 1849 aa15.26■□□□□ 0.03
FAM90A3P-201ENST00000506444 STARD3NLO95772 234 aa15.25■□□□□ 0.03
FAM90A3P-201ENST00000506444 EIF2S2P20042 333 aaKnown RBP15.25■□□□□ 0.03
FAM90A3P-201ENST00000506444 BRPF1P55201 1214 aaPredicted RBP15.25■□□□□ 0.03
FAM90A3P-201ENST00000506444 DBF4Q9UBU7 674 aaPredicted RBP15.25■□□□□ 0.03
FAM90A3P-201ENST00000506444 PTF1AQ7RTS3 328 aa15.24■□□□□ 0.03
FAM90A3P-201ENST00000506444 UPF1Q92900 1129 aaKnown RBP eCLIP15.24■□□□□ 0.03
FAM90A3P-201ENST00000506444 ZNF831Q5JPB2 1677 aa15.24■□□□□ 0.03
FAM90A3P-201ENST00000506444 PRAMEF22A3QJZ6 481 aa15.24■□□□□ 0.03
FAM90A3P-201ENST00000506444 IPO8O15397 1037 aaKnown RBP15.24■□□□□ 0.03
FAM90A3P-201ENST00000506444 BCAR3O75815 825 aa15.24■□□□□ 0.03
FAM90A3P-201ENST00000506444 ATP6V1AP38606 617 aa15.24■□□□□ 0.03
FAM90A3P-201ENST00000506444 SUPT16HQ9Y5B9 1047 aaKnown RBP15.24■□□□□ 0.03
FAM90A3P-201ENST00000506444 USP16Q9Y5T5 823 aa15.24■□□□□ 0.03
FAM90A3P-201ENST00000506444 CICQ96RK0 1608 aaPredicted RBP15.23■□□□□ 0.03
FAM90A3P-201ENST00000506444 LAMB4A4D0S4 1761 aa15.23■□□□□ 0.03
FAM90A3P-201ENST00000506444 KAT6BQ8WYB5 2073 aa15.23■□□□□ 0.03
FAM90A3P-201ENST00000506444 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
FAM90A3P-201ENST00000506444 CANXP27824 592 aaKnown RBP15.23■□□□□ 0.03
FAM90A3P-201ENST00000506444 DNAJC10Q8IXB1 793 aa15.23■□□□□ 0.03
FAM90A3P-201ENST00000506444 MRPL50Q8N5N7 158 aaKnown RBP15.23■□□□□ 0.03
FAM90A3P-201ENST00000506444 NECTIN2Q92692 538 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms