RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 TERF2IPQ9NYB0 399 aa12.7□□□□□ -0.38
COPS4-204ENST00000506443 ARFGEF1Q9Y6D6 1849 aa12.69□□□□□ -0.38
COPS4-204ENST00000506443 PCNTO95613 3336 aa12.69□□□□□ -0.38
COPS4-204ENST00000506443 A0A0G2JLW4 131 aa12.69□□□□□ -0.38
COPS4-204ENST00000506443 MMP10P09238 476 aa12.69□□□□□ -0.38
COPS4-204ENST00000506443 HSP90AB2PQ58FF8 381 aa12.69□□□□□ -0.38
COPS4-204ENST00000506443 PIGBQ92521 554 aa12.69□□□□□ -0.38
COPS4-204ENST00000506443 GGNBP2Q9H3C7 697 aa12.69□□□□□ -0.38
COPS4-204ENST00000506443 PCDH11XQ9BZA7 1347 aa12.68□□□□□ -0.38
COPS4-204ENST00000506443 PCDH11YQ9BZA8 1340 aa12.68□□□□□ -0.38
COPS4-204ENST00000506443 COG3Q96JB2 828 aa12.68□□□□□ -0.38
COPS4-204ENST00000506443 CARD11Q9BXL7 1154 aa12.68□□□□□ -0.38
COPS4-204ENST00000506443 BCS1LQ9Y276 419 aa12.68□□□□□ -0.38
COPS4-204ENST00000506443 ANKRD26Q9UPS8 1709 aa12.68□□□□□ -0.38
COPS4-204ENST00000506443 MYH14Q7Z406 1995 aaKnown RBP12.67□□□□□ -0.38
COPS4-204ENST00000506443 GNPATO15228 680 aa12.67□□□□□ -0.38
COPS4-204ENST00000506443 RAPGEF4Q8WZA2 1011 aa12.67□□□□□ -0.38
COPS4-204ENST00000506443 KDRP35968 1356 aa12.67□□□□□ -0.38
COPS4-204ENST00000506443 SBF1O95248 1867 aa12.66□□□□□ -0.38
COPS4-204ENST00000506443 TOMM70O94826 608 aa12.66□□□□□ -0.38
COPS4-204ENST00000506443 DPEP1P16444 411 aa12.66□□□□□ -0.38
COPS4-204ENST00000506443 TATP17735 454 aaPredicted RBP12.66□□□□□ -0.38
COPS4-204ENST00000506443 TESK2Q96S53 571 aa12.66□□□□□ -0.38
COPS4-204ENST00000506443 ASAP1Q9ULH1 1129 aa12.66□□□□□ -0.38
COPS4-204ENST00000506443 TNRC6CQ9HCJ0 1690 aaKnown RBP12.66□□□□□ -0.38
COPS4-204ENST00000506443 NCAPD2Q15021 1401 aa12.65□□□□□ -0.38
COPS4-204ENST00000506443 SMG6Q86US8 1419 aaKnown RBP12.65□□□□□ -0.38
COPS4-204ENST00000506443 NSD3Q9BZ95 1437 aa12.65□□□□□ -0.38
COPS4-204ENST00000506443 LOC102724428A0A0B4J2F2 783 aa12.65□□□□□ -0.38
COPS4-204ENST00000506443 SIK1P57059 783 aa12.65□□□□□ -0.38
COPS4-204ENST00000506443 KLRG1Q96E93 195 aa12.65□□□□□ -0.38
COPS4-204ENST00000506443 SLC4A9Q96Q91 983 aa12.65□□□□□ -0.38
COPS4-204ENST00000506443 EMILIN1Q9Y6C2 1016 aa12.65□□□□□ -0.38
COPS4-204ENST00000506443 SSFA2P28290 1259 aa12.64□□□□□ -0.39
COPS4-204ENST00000506443 ARHGAP27Q6ZUM4 889 aa12.64□□□□□ -0.39
COPS4-204ENST00000506443 FLAD1Q8NFF5 587 aa12.64□□□□□ -0.39
COPS4-204ENST00000506443 TIAM2Q8IVF5 1701 aa12.64□□□□□ -0.39
COPS4-204ENST00000506443 C9orf131Q5VYM1 1079 aa12.63□□□□□ -0.39
COPS4-204ENST00000506443 REM2Q8IYK8 340 aaPredicted RBP12.63□□□□□ -0.39
COPS4-204ENST00000506443 TNS4Q8IZW8 715 aa12.63□□□□□ -0.39
COPS4-204ENST00000506443 JMYQ8N9B5 988 aa12.63□□□□□ -0.39
COPS4-204ENST00000506443 INSRP06213 1382 aa12.63□□□□□ -0.39
COPS4-204ENST00000506443 ADAMTS7Q9UKP4 1686 aa12.63□□□□□ -0.39
COPS4-204ENST00000506443 TJP1Q07157 1748 aa12.62□□□□□ -0.39
COPS4-204ENST00000506443 FLT4P35916 1363 aa12.62□□□□□ -0.39
COPS4-204ENST00000506443 FYB1O15117 783 aa12.62□□□□□ -0.39
COPS4-204ENST00000506443 CGNL1Q0VF96 1302 aa12.62□□□□□ -0.39
COPS4-204ENST00000506443 ST20-MTHFSA0A0A6YYL1 179 aa12.61□□□□□ -0.39
COPS4-204ENST00000506443 KCNA3P22001 575 aa12.61□□□□□ -0.39
COPS4-204ENST00000506443 RBM46Q8TBY0 533 aaKnown RBP12.61□□□□□ -0.39
COPS4-204ENST00000506443 FCHSD2O94868 740 aa12.6□□□□□ -0.39
COPS4-204ENST00000506443 ATP6V1AP38606 617 aa12.6□□□□□ -0.39
COPS4-204ENST00000506443 PRELPP51888 382 aa12.6□□□□□ -0.39
COPS4-204ENST00000506443 RASSF7Q02833 373 aa12.6□□□□□ -0.39
COPS4-204ENST00000506443 ATG3Q9NT62 314 aa12.6□□□□□ -0.39
COPS4-204ENST00000506443 ATXN8OSP0DMR3 200 aa12.59□□□□□ -0.39
COPS4-204ENST00000506443 CHRNA5P30532 468 aa12.59□□□□□ -0.39
COPS4-204ENST00000506443 DDR1Q08345 913 aa12.59□□□□□ -0.39
COPS4-204ENST00000506443 SMARCC1Q92922 1105 aaPredicted RBP12.59□□□□□ -0.39
COPS4-204ENST00000506443 SRP68Q9UHB9 627 aaKnown RBP12.59□□□□□ -0.39
COPS4-204ENST00000506443 CCDC88AQ3V6T2 1871 aa12.59□□□□□ -0.39
COPS4-204ENST00000506443 ZNF831Q5JPB2 1677 aa12.58□□□□□ -0.4
COPS4-204ENST00000506443 AFDNP55196 1824 aaKnown RBP12.58□□□□□ -0.4
COPS4-204ENST00000506443 KDM6AO15550 1401 aaPredicted RBP12.58□□□□□ -0.4
COPS4-204ENST00000506443 HSPA1AP0DMV8 641 aaKnown RBP12.58□□□□□ -0.4
COPS4-204ENST00000506443 HSPA1BP0DMV9 641 aaKnown RBP12.58□□□□□ -0.4
COPS4-204ENST00000506443 GYS1P13807 737 aa12.58□□□□□ -0.4
COPS4-204ENST00000506443 RRAGCQ9HB90 399 aa12.58□□□□□ -0.4
COPS4-204ENST00000506443 TMOD3Q9NYL9 352 aa12.58□□□□□ -0.4
COPS4-204ENST00000506443 RNF181Q9P0P0 153 aa12.58□□□□□ -0.4
COPS4-204ENST00000506443 NKX1-1Q15270 411 aaPredicted RBP12.57□□□□□ -0.4
COPS4-204ENST00000506443 ARHGEF1Q92888 912 aaKnown RBP12.57□□□□□ -0.4
COPS4-204ENST00000506443 PLEKHG2Q9H7P9 1386 aa12.56□□□□□ -0.4
COPS4-204ENST00000506443 DLEC1Q9Y238 1755 aa12.56□□□□□ -0.4
COPS4-204ENST00000506443 DCAF5Q96JK2 942 aa12.56□□□□□ -0.4
COPS4-204ENST00000506443 PPM1GO15355 546 aaPredicted RBP12.55□□□□□ -0.4
COPS4-204ENST00000506443 SLC24A1O60721 1099 aa12.55□□□□□ -0.4
COPS4-204ENST00000506443 PHKG2P15735 406 aa12.55□□□□□ -0.4
COPS4-204ENST00000506443 HMGB2P26583 209 aaKnown RBP12.55□□□□□ -0.4
COPS4-204ENST00000506443 TGFB2P61812 414 aa12.55□□□□□ -0.4
COPS4-204ENST00000506443 EYA1Q99502 592 aa12.55□□□□□ -0.4
COPS4-204ENST00000506443 COL11A2P13942 1736 aaPredicted RBP12.54□□□□□ -0.4
COPS4-204ENST00000506443 TMF1P82094 1093 aa12.54□□□□□ -0.4
COPS4-204ENST00000506443 FKBP8Q14318 412 aa12.54□□□□□ -0.4
COPS4-204ENST00000506443 C16orf71Q8IYS4 520 aaPredicted RBP12.54□□□□□ -0.4
COPS4-204ENST00000506443 CARD14Q9BXL6 1004 aa12.54□□□□□ -0.4
COPS4-204ENST00000506443 KIF24Q5T7B8 1368 aa12.54□□□□□ -0.4
COPS4-204ENST00000506443 CCDC87Q9NVE4 849 aa12.53□□□□□ -0.4
COPS4-204ENST00000506443 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
COPS4-204ENST00000506443 CARMIL3Q8ND23 1372 aa12.53□□□□□ -0.4
COPS4-204ENST00000506443 FSTL1Q12841 308 aa12.52□□□□□ -0.41
COPS4-204ENST00000506443 TRAPPC3LQ5T215 181 aa12.52□□□□□ -0.41
COPS4-204ENST00000506443 TONSLQ96HA7 1378 aa12.52□□□□□ -0.41
COPS4-204ENST00000506443 NRXN2Q9P2S2 1712 aa12.51□□□□□ -0.41
COPS4-204ENST00000506443 ANKRD31Q8N7Z5 1873 aa12.51□□□□□ -0.41
COPS4-204ENST00000506443 PARP3Q9Y6F1 533 aa12.51□□□□□ -0.41
COPS4-204ENST00000506443 CNTNAP4Q9C0A0 1308 aa12.51□□□□□ -0.41
COPS4-204ENST00000506443 CACNA1SQ13698 1873 aa12.51□□□□□ -0.41
COPS4-204ENST00000506443 NLGN1Q8N2Q7 840 aa12.5□□□□□ -0.41
COPS4-204ENST00000506443 PIP4P2Q8N4L2 257 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms