RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 ATG3Q9NT62 314 aa22.77■■□□□ 1.24
PDLIM7-215ENST00000506161 TMOD3Q9NYL9 352 aa22.77■■□□□ 1.24
PDLIM7-215ENST00000506161 HMOX1P09601 288 aa22.76■■□□□ 1.23
PDLIM7-215ENST00000506161 KLHL34Q8N239 644 aa22.76■■□□□ 1.23
PDLIM7-215ENST00000506161 LINC00116Q8NCU8 138 aa22.76■■□□□ 1.23
PDLIM7-215ENST00000506161 MYH14Q7Z406 1995 aaKnown RBP22.76■■□□□ 1.23
PDLIM7-215ENST00000506161 ZNF831Q5JPB2 1677 aa22.75■■□□□ 1.23
PDLIM7-215ENST00000506161 ADAMTS7Q9UKP4 1686 aa22.75■■□□□ 1.23
PDLIM7-215ENST00000506161 PLEKHO1Q53GL0 409 aaPredicted RBP22.75■■□□□ 1.23
PDLIM7-215ENST00000506161 PELP1Q8IZL8 1130 aaKnown RBP22.75■■□□□ 1.23
PDLIM7-215ENST00000506161 TJP1Q07157 1748 aa22.74■■□□□ 1.23
PDLIM7-215ENST00000506161 LOC102724428A0A0B4J2F2 783 aa22.74■■□□□ 1.23
PDLIM7-215ENST00000506161 SIK1P57059 783 aa22.74■■□□□ 1.23
PDLIM7-215ENST00000506161 POLD1P28340 1107 aa22.73■■□□□ 1.23
PDLIM7-215ENST00000506161 SMARCC1Q92922 1105 aaPredicted RBP22.73■■□□□ 1.23
PDLIM7-215ENST00000506161 MSL1Q68DK7 614 aa22.72■■□□□ 1.23
PDLIM7-215ENST00000506161 AMOTQ4VCS5 1084 aa22.71■■□□□ 1.23
PDLIM7-215ENST00000506161 SLC16A10Q8TF71 515 aa22.71■■□□□ 1.23
PDLIM7-215ENST00000506161 DCAF5Q96JK2 942 aa22.71■■□□□ 1.23
PDLIM7-215ENST00000506161 C4AP0C0L4 1744 aa22.69■■□□□ 1.22
PDLIM7-215ENST00000506161 ERVV-2B6SEH9 535 aa22.69■■□□□ 1.22
PDLIM7-215ENST00000506161 DIAPH1O60610 1272 aaKnown RBP22.69■■□□□ 1.22
PDLIM7-215ENST00000506161 CEP350Q5VT06 3117 aa22.68■■□□□ 1.22
PDLIM7-215ENST00000506161 CICQ96RK0 1608 aaPredicted RBP22.68■■□□□ 1.22
PDLIM7-215ENST00000506161 LGR6Q9HBX8 967 aa22.68■■□□□ 1.22
PDLIM7-215ENST00000506161 MRC1P22897 1456 aa22.67■■□□□ 1.22
PDLIM7-215ENST00000506161 MSH5O43196 834 aa22.67■■□□□ 1.22
PDLIM7-215ENST00000506161 PHF14O94880 888 aa22.67■■□□□ 1.22
PDLIM7-215ENST00000506161 ATP6V1AP38606 617 aa22.67■■□□□ 1.22
PDLIM7-215ENST00000506161 SIPA1L3O60292 1781 aaPredicted RBP22.67■■□□□ 1.22
PDLIM7-215ENST00000506161 HSP90AB1P08238 724 aaKnown RBP22.66■■□□□ 1.22
PDLIM7-215ENST00000506161 MTHFSDQ2M296 383 aaKnown RBP22.66■■□□□ 1.22
PDLIM7-215ENST00000506161 CABP4P57796 275 aa22.65■■□□□ 1.22
PDLIM7-215ENST00000506161 C1orf141Q5JVX7 400 aa22.65■■□□□ 1.22
PDLIM7-215ENST00000506161 NFATC2IPQ8NCF5 419 aa22.65■■□□□ 1.22
PDLIM7-215ENST00000506161 NLGN2Q8NFZ4 835 aa22.65■■□□□ 1.22
PDLIM7-215ENST00000506161 AK7Q96M32 723 aa22.65■■□□□ 1.22
PDLIM7-215ENST00000506161 UBR2Q8IWV8 1755 aa22.64■■□□□ 1.22
PDLIM7-215ENST00000506161 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.64■■□□□ 1.21
PDLIM7-215ENST00000506161 GRIN3BO60391 1043 aa22.64■■□□□ 1.21
PDLIM7-215ENST00000506161 RBM42Q9BTD8 480 aaKnown RBP22.64■■□□□ 1.21
PDLIM7-215ENST00000506161 PPP2R1AP30153 589 aa22.62■■□□□ 1.21
PDLIM7-215ENST00000506161 AKAP4Q5JQC9 854 aa22.62■■□□□ 1.21
PDLIM7-215ENST00000506161 KCPQ6ZWJ8 1503 aa22.62■■□□□ 1.21
PDLIM7-215ENST00000506161 U2SURPO15042 1029 aaKnown RBP22.61■■□□□ 1.21
PDLIM7-215ENST00000506161 GNPATO15228 680 aa22.61■■□□□ 1.21
PDLIM7-215ENST00000506161 RNMTO43148 476 aaKnown RBP22.61■■□□□ 1.21
PDLIM7-215ENST00000506161 PTCD1O75127 700 aaKnown RBP22.6■■□□□ 1.21
PDLIM7-215ENST00000506161 YBX3P16989 372 aaKnown RBP eCLIP22.6■■□□□ 1.21
PDLIM7-215ENST00000506161 GOLGB1Q14789 3259 aaKnown RBP22.6■■□□□ 1.21
PDLIM7-215ENST00000506161 ATP10DQ9P241 1426 aa22.59■■□□□ 1.21
PDLIM7-215ENST00000506161 KIAA1551Q9HCM1 1747 aa22.59■■□□□ 1.21
PDLIM7-215ENST00000506161 SSFA2P28290 1259 aa22.58■■□□□ 1.21
PDLIM7-215ENST00000506161 SLC39A6Q13433 755 aa22.58■■□□□ 1.21
PDLIM7-215ENST00000506161 SLC52A2Q9HAB3 445 aa22.58■■□□□ 1.21
PDLIM7-215ENST00000506161 FLAD1Q8NFF5 587 aa22.57■■□□□ 1.2
PDLIM7-215ENST00000506161 PHACTR3Q96KR7 559 aa22.57■■□□□ 1.2
PDLIM7-215ENST00000506161 HSPA6P17066 643 aa22.56■■□□□ 1.2
PDLIM7-215ENST00000506161 RSPH6AQ9H0K4 717 aa22.56■■□□□ 1.2
PDLIM7-215ENST00000506161 GPBP1L1Q9HC44 474 aaPredicted RBP22.56■■□□□ 1.2
PDLIM7-215ENST00000506161 DLG5Q8TDM6 1919 aa22.56■■□□□ 1.2
PDLIM7-215ENST00000506161 KIF13BQ9NQT8 1826 aa22.55■■□□□ 1.2
PDLIM7-215ENST00000506161 CNTNAP4Q9C0A0 1308 aa22.55■■□□□ 1.2
PDLIM7-215ENST00000506161 PRKAR2BP31323 418 aa22.53■■□□□ 1.2
PDLIM7-215ENST00000506161 IL17REQ8NFR9 667 aa22.53■■□□□ 1.2
PDLIM7-215ENST00000506161 N4BP2Q86UW6 1770 aaPredicted RBP22.53■■□□□ 1.2
PDLIM7-215ENST00000506161 CRKLP46109 303 aaKnown RBP22.52■■□□□ 1.2
PDLIM7-215ENST00000506161 RC3H1Q5TC82 1133 aaKnown RBP22.52■■□□□ 1.2
PDLIM7-215ENST00000506161 DNAJC10Q8IXB1 793 aa22.52■■□□□ 1.2
PDLIM7-215ENST00000506161 ARHGEF1Q92888 912 aaKnown RBP22.52■■□□□ 1.2
PDLIM7-215ENST00000506161 RPS6KA4O75676 772 aa22.5■■□□□ 1.19
PDLIM7-215ENST00000506161 INTS5Q6P9B9 1019 aaKnown RBP22.5■■□□□ 1.19
PDLIM7-215ENST00000506161 RTCBQ9Y3I0 505 aaKnown RBP22.5■■□□□ 1.19
PDLIM7-215ENST00000506161 SRP68Q9UHB9 627 aaKnown RBP22.48■■□□□ 1.19
PDLIM7-215ENST00000506161 ADCY9O60503 1353 aa22.48■■□□□ 1.19
PDLIM7-215ENST00000506161 GYS1P13807 737 aa22.47■■□□□ 1.19
PDLIM7-215ENST00000506161 TRAPPC3LQ5T215 181 aa22.47■■□□□ 1.19
PDLIM7-215ENST00000506161 ZNF526Q8TF50 670 aaPredicted RBP22.47■■□□□ 1.19
PDLIM7-215ENST00000506161 CFAP53Q96M91 514 aa22.47■■□□□ 1.19
PDLIM7-215ENST00000506161 BRCA1P38398 1863 aaKnown RBP22.46■■□□□ 1.19
PDLIM7-215ENST00000506161 GNAT3A8MTJ3 354 aa22.46■■□□□ 1.19
PDLIM7-215ENST00000506161 HMGB2P26583 209 aaKnown RBP22.46■■□□□ 1.19
PDLIM7-215ENST00000506161 WWC3Q9ULE0 1092 aa22.46■■□□□ 1.19
PDLIM7-215ENST00000506161 CEMIPQ8WUJ3 1361 aa22.46■■□□□ 1.19
PDLIM7-215ENST00000506161 KCNQ3O43525 872 aa22.45■■□□□ 1.18
PDLIM7-215ENST00000506161 MMP10P09238 476 aa22.45■■□□□ 1.18
PDLIM7-215ENST00000506161 U2AF1L5P0DN76 240 aaPredicted RBP22.45■■□□□ 1.18
PDLIM7-215ENST00000506161 CYP19A1P11511 503 aaPredicted RBP22.45■■□□□ 1.18
PDLIM7-215ENST00000506161 U2AF1Q01081 240 aaKnown RBP eCLIP22.45■■□□□ 1.184e-6■■□□□ 12.1
PDLIM7-215ENST00000506161 GAS2L2Q8NHY3 880 aa22.45■■□□□ 1.18
PDLIM7-215ENST00000506161 AFDNP55196 1824 aaKnown RBP22.45■■□□□ 1.18
PDLIM7-215ENST00000506161 CD2APQ9Y5K6 639 aa22.44■■□□□ 1.18
PDLIM7-215ENST00000506161 DCTN1Q14203 1278 aa22.42■■□□□ 1.18
PDLIM7-215ENST00000506161 ZNF496Q96IT1 587 aaPredicted RBP22.42■■□□□ 1.18
PDLIM7-215ENST00000506161 ZBTB1Q9Y2K1 713 aa22.42■■□□□ 1.18
PDLIM7-215ENST00000506161 SOS1Q07889 1333 aaPredicted RBP22.41■■□□□ 1.18
PDLIM7-215ENST00000506161 USP42Q9H9J4 1324 aaKnown RBP22.41■■□□□ 1.18
PDLIM7-215ENST00000506161 ADRA2BP18089 450 aa22.41■■□□□ 1.18
PDLIM7-215ENST00000506161 DDX10Q13206 875 aaKnown RBP22.41■■□□□ 1.18
PDLIM7-215ENST00000506161 CCDC87Q9NVE4 849 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms