RNA–Protein interactions for RNA: ENST00000506147.5

MATR3-235, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-235ENST00000506147 THUMPD2Q9BTF0 503 aaKnown RBP20.64■□□□□ 0.89
MATR3-235ENST00000506147 CHL1O00533 1208 aa20.63■□□□□ 0.89
MATR3-235ENST00000506147 SEPT12Q8IYM1 358 aa20.63■□□□□ 0.89
MATR3-235ENST00000506147 CDCA7LQ96GN5 454 aa20.63■□□□□ 0.89
MATR3-235ENST00000506147 MRC1P22897 1456 aa20.62■□□□□ 0.89
MATR3-235ENST00000506147 BAG6P46379 1132 aa20.62■□□□□ 0.89
MATR3-235ENST00000506147 DUSP27Q5VZP5 1158 aa20.62■□□□□ 0.89
MATR3-235ENST00000506147 SPINK5Q9NQ38 1064 aaPredicted RBP20.62■□□□□ 0.89
MATR3-235ENST00000506147 BCL9O00512 1426 aa20.61■□□□□ 0.89
MATR3-235ENST00000506147 A0A0G2JS52 829 aa20.61■□□□□ 0.89
MATR3-235ENST00000506147 MYT1Q01538 1121 aa20.61■□□□□ 0.89
MATR3-235ENST00000506147 MARCH10Q8NA82 808 aaPredicted RBP20.61■□□□□ 0.89
MATR3-235ENST00000506147 SLC52A2Q9HAB3 445 aa20.61■□□□□ 0.89
MATR3-235ENST00000506147 SCN11AQ9UI33 1791 aa20.61■□□□□ 0.89
MATR3-235ENST00000506147 R3HDM1Q15032 1099 aaKnown RBP20.59■□□□□ 0.89
MATR3-235ENST00000506147 CABP4P57796 275 aa20.58■□□□□ 0.89
MATR3-235ENST00000506147 LAS1LQ9Y4W2 734 aaKnown RBP20.58■□□□□ 0.89
MATR3-235ENST00000506147 FANCIQ9NVI1 1328 aa20.57■□□□□ 0.88
MATR3-235ENST00000506147 KRT27Q7Z3Y8 459 aa20.57■□□□□ 0.88
MATR3-235ENST00000506147 MBIPQ9NS73 344 aa20.57■□□□□ 0.88
MATR3-235ENST00000506147 TSPYL4Q9UJ04 414 aa20.57■□□□□ 0.88
MATR3-235ENST00000506147 BTBD11A6QL63 1104 aa20.56■□□□□ 0.88
MATR3-235ENST00000506147 CT47B1P0C2W7 299 aaPredicted RBP20.56■□□□□ 0.88
MATR3-235ENST00000506147 NFATC2IPQ8NCF5 419 aa20.56■□□□□ 0.88
MATR3-235ENST00000506147 TSR2Q969E8 191 aaKnown RBP20.54■□□□□ 0.88
MATR3-235ENST00000506147 TMOD3Q9NYL9 352 aa20.54■□□□□ 0.88
MATR3-235ENST00000506147 SIPA1L3O60292 1781 aaPredicted RBP20.54■□□□□ 0.88
MATR3-235ENST00000506147 SOS1Q07889 1333 aaPredicted RBP20.53■□□□□ 0.88
MATR3-235ENST00000506147 VIRMAQ69YN4 1812 aaKnown RBP20.53■□□□□ 0.88
MATR3-235ENST00000506147 EN1Q05925 392 aaPredicted RBP20.53■□□□□ 0.88
MATR3-235ENST00000506147 ZNF790Q6PG37 636 aa20.51■□□□□ 0.87
MATR3-235ENST00000506147 ZNF428Q96B54 188 aa20.51■□□□□ 0.87
MATR3-235ENST00000506147 TOGARAM1Q9Y4F4 1720 aa20.5■□□□□ 0.87
MATR3-235ENST00000506147 PRIM1P49642 420 aaKnown RBP20.5■□□□□ 0.87
MATR3-235ENST00000506147 FAM196AQ6ZSG2 479 aa20.5■□□□□ 0.87
MATR3-235ENST00000506147 CHMP4AQ9BY43 222 aa20.5■□□□□ 0.87
MATR3-235ENST00000506147 MIS18AQ9NYP9 233 aa20.5■□□□□ 0.87
MATR3-235ENST00000506147 HOXB7P09629 217 aa20.49■□□□□ 0.87
MATR3-235ENST00000506147 EIF4A1P60842 406 aaKnown RBP20.49■□□□□ 0.87
MATR3-235ENST00000506147 EXOSC9Q06265 439 aaKnown RBP20.49■□□□□ 0.87
MATR3-235ENST00000506147 PIGBQ92521 554 aa20.49■□□□□ 0.87
MATR3-235ENST00000506147 KDM3BQ7LBC6 1761 aa20.49■□□□□ 0.87
MATR3-235ENST00000506147 TTC5Q8N0Z6 440 aa20.48■□□□□ 0.87
MATR3-235ENST00000506147 HEG1Q9ULI3 1381 aa20.47■□□□□ 0.87
MATR3-235ENST00000506147 DOT1LQ8TEK3 1739 aa20.47■□□□□ 0.87
MATR3-235ENST00000506147 TNS1Q9HBL0 1735 aaKnown RBP20.46■□□□□ 0.87
MATR3-235ENST00000506147 TWISTNBQ3B726 338 aaPredicted RBP20.45■□□□□ 0.86
MATR3-235ENST00000506147 SYTL4Q96C24 671 aaPredicted RBP20.45■□□□□ 0.86
MATR3-235ENST00000506147 ACSBG1Q96GR2 724 aa20.45■□□□□ 0.86
MATR3-235ENST00000506147 FMNL2Q96PY5 1086 aa20.45■□□□□ 0.86
MATR3-235ENST00000506147 ITGB4P16144 1822 aa20.44■□□□□ 0.86
MATR3-235ENST00000506147 VAMP4O75379 141 aa20.44■□□□□ 0.86
MATR3-235ENST00000506147 SLC39A6Q13433 755 aa20.44■□□□□ 0.86
MATR3-235ENST00000506147 C8orf58Q8NAV2 365 aa20.44■□□□□ 0.86
MATR3-235ENST00000506147 SMARCC1Q92922 1105 aaPredicted RBP20.44■□□□□ 0.86
MATR3-235ENST00000506147 PAPPAQ13219 1627 aa20.44■□□□□ 0.86
MATR3-235ENST00000506147 KCNQ3O43525 872 aa20.43■□□□□ 0.86
MATR3-235ENST00000506147 VSIG10Q8N0Z9 540 aa20.43■□□□□ 0.86
MATR3-235ENST00000506147 BCL11BQ9C0K0 894 aaPredicted RBP20.43■□□□□ 0.86
MATR3-235ENST00000506147 ATG3Q9NT62 314 aa20.43■□□□□ 0.86
MATR3-235ENST00000506147 RCAN3Q9UKA8 241 aa20.43■□□□□ 0.86
MATR3-235ENST00000506147 NHSQ6T4R5 1651 aa20.42■□□□□ 0.86
MATR3-235ENST00000506147 ALDH1L2Q3SY69 923 aa20.42■□□□□ 0.86
MATR3-235ENST00000506147 TSPYL6Q8N831 410 aa20.42■□□□□ 0.86
MATR3-235ENST00000506147 DCAF8L1A6NGE4 600 aa20.41■□□□□ 0.86
MATR3-235ENST00000506147 KCNQ2O43526 872 aa20.41■□□□□ 0.86
MATR3-235ENST00000506147 GIGYF1O75420 1035 aaPredicted RBP20.41■□□□□ 0.86
MATR3-235ENST00000506147 SNRPA1P09661 255 aaKnown RBP20.41■□□□□ 0.86
MATR3-235ENST00000506147 ZNF496Q96IT1 587 aaPredicted RBP20.41■□□□□ 0.86
MATR3-235ENST00000506147 ASAP1Q9ULH1 1129 aa20.41■□□□□ 0.86
MATR3-235ENST00000506147 EZH2Q15910 746 aaKnown RBP20.4■□□□□ 0.86
MATR3-235ENST00000506147 FAM182BQ5T319 152 aa20.4■□□□□ 0.86
MATR3-235ENST00000506147 UBR2Q8IWV8 1755 aa20.39■□□□□ 0.86
MATR3-235ENST00000506147 KCPQ6ZWJ8 1503 aa20.39■□□□□ 0.85
MATR3-235ENST00000506147 RARSP54136 660 aaKnown RBP20.39■□□□□ 0.85
MATR3-235ENST00000506147 KRT24Q2M2I5 525 aa20.39■□□□□ 0.85
MATR3-235ENST00000506147 TEX13AQ9BXU3 409 aaPredicted RBP20.39■□□□□ 0.85
MATR3-235ENST00000506147 ELL2O00472 640 aaPredicted RBP20.38■□□□□ 0.85
MATR3-235ENST00000506147 BRPF1P55201 1214 aaPredicted RBP20.38■□□□□ 0.85
MATR3-235ENST00000506147 ZNF784Q8NCA9 323 aaPredicted RBP20.38■□□□□ 0.85
MATR3-235ENST00000506147 SBF2Q86WG5 1849 aa20.37■□□□□ 0.85
MATR3-235ENST00000506147 CCDC30Q5VVM6 783 aa20.37■□□□□ 0.85
MATR3-235ENST00000506147 PALLDQ8WX93 1383 aa20.35■□□□□ 0.85
MATR3-235ENST00000506147 PTCD1O75127 700 aaKnown RBP20.35■□□□□ 0.85
MATR3-235ENST00000506147 HMGB2P26583 209 aaKnown RBP20.35■□□□□ 0.85
MATR3-235ENST00000506147 HDGFL1Q5TGJ6 251 aa20.35■□□□□ 0.85
MATR3-235ENST00000506147 CAMKK2Q96RR4 588 aa20.35■□□□□ 0.85
MATR3-235ENST00000506147 ERBB4Q15303 1308 aa20.34■□□□□ 0.85
MATR3-235ENST00000506147 RBM42Q9BTD8 480 aaKnown RBP20.34■□□□□ 0.85
MATR3-235ENST00000506147 RNF123Q5XPI4 1314 aa20.33■□□□□ 0.85
MATR3-235ENST00000506147 SSH1Q8WYL5 1049 aa20.33■□□□□ 0.85
MATR3-235ENST00000506147 STK31Q9BXU1 1019 aa20.33■□□□□ 0.85
MATR3-235ENST00000506147 PPP1R1BQ9UD71 204 aaPredicted RBP20.33■□□□□ 0.85
MATR3-235ENST00000506147 ZNF831Q5JPB2 1677 aa20.32■□□□□ 0.84
MATR3-235ENST00000506147 CICQ96RK0 1608 aaPredicted RBP20.32■□□□□ 0.84
MATR3-235ENST00000506147 KAT6BQ8WYB5 2073 aa20.32■□□□□ 0.84
MATR3-235ENST00000506147 LOC102724428A0A0B4J2F2 783 aa20.32■□□□□ 0.84
MATR3-235ENST00000506147 SIK1P57059 783 aa20.32■□□□□ 0.84
MATR3-235ENST00000506147 C1QTNF8P60827 252 aa20.32■□□□□ 0.84
MATR3-235ENST00000506147 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms