RNA–Protein interactions for RNA: ENST00000505353.1

SIL1-206, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-206ENST00000505353 TAF1LQ8IZX4 1826 aa12.63□□□□□ -0.39
SIL1-206ENST00000505353 LOC102724428A0A0B4J2F2 783 aa12.63□□□□□ -0.39
SIL1-206ENST00000505353 SIK1P57059 783 aa12.63□□□□□ -0.39
SIL1-206ENST00000505353 CABP4P57796 275 aa12.63□□□□□ -0.39
SIL1-206ENST00000505353 GAS2L2Q8NHY3 880 aa12.63□□□□□ -0.39
SIL1-206ENST00000505353 VIRMAQ69YN4 1812 aaKnown RBP12.62□□□□□ -0.39
SIL1-206ENST00000505353 ITPK1Q13572 414 aa12.62□□□□□ -0.39
SIL1-206ENST00000505353 AMIGO3Q86WK7 504 aa12.62□□□□□ -0.39
SIL1-206ENST00000505353 STK32BQ9NY57 414 aa12.62□□□□□ -0.39
SIL1-206ENST00000505353 ZNF831Q5JPB2 1677 aa12.61□□□□□ -0.39
SIL1-206ENST00000505353 MAP3K5Q99683 1374 aa12.61□□□□□ -0.39
SIL1-206ENST00000505353 GNAT3A8MTJ3 354 aa12.61□□□□□ -0.39
SIL1-206ENST00000505353 PNPLA7Q6ZV29 1317 aa12.61□□□□□ -0.39
SIL1-206ENST00000505353 QSER1Q2KHR3 1735 aa12.6□□□□□ -0.39
SIL1-206ENST00000505353 LRP5O75197 1615 aa12.6□□□□□ -0.39
SIL1-206ENST00000505353 CCDC184Q52MB2 194 aa12.6□□□□□ -0.39
SIL1-206ENST00000505353 LINC00116Q8NCU8 138 aa12.6□□□□□ -0.39
SIL1-206ENST00000505353 SGIP1Q9BQI5 828 aa12.6□□□□□ -0.39
SIL1-206ENST00000505353 C5P01031 1676 aa12.6□□□□□ -0.39
SIL1-206ENST00000505353 TUBGCP6Q96RT7 1819 aa12.6□□□□□ -0.39
SIL1-206ENST00000505353 SIPA1L3O60292 1781 aaPredicted RBP12.59□□□□□ -0.39
SIL1-206ENST00000505353 HTATSF1O43719 755 aaKnown RBP12.59□□□□□ -0.39
SIL1-206ENST00000505353 PTGER2P43116 358 aa12.59□□□□□ -0.39
SIL1-206ENST00000505353 SLC39A6Q13433 755 aa12.58□□□□□ -0.4
SIL1-206ENST00000505353 C4BP0C0L5 1744 aa12.57□□□□□ -0.4
SIL1-206ENST00000505353 COL24A1Q17RW2 1714 aa12.57□□□□□ -0.4
SIL1-206ENST00000505353 ATP6V1AP38606 617 aa12.57□□□□□ -0.4
SIL1-206ENST00000505353 COL23A1Q86Y22 540 aaPredicted RBP12.57□□□□□ -0.4
SIL1-206ENST00000505353 ADAMTS8Q9UP79 889 aa12.57□□□□□ -0.4
SIL1-206ENST00000505353 CICQ96RK0 1608 aaPredicted RBP12.57□□□□□ -0.4
SIL1-206ENST00000505353 MYH14Q7Z406 1995 aaKnown RBP12.57□□□□□ -0.4
SIL1-206ENST00000505353 KCPQ6ZWJ8 1503 aa12.57□□□□□ -0.4
SIL1-206ENST00000505353 PTCD1O75127 700 aaKnown RBP12.56□□□□□ -0.4
SIL1-206ENST00000505353 HMGB2P26583 209 aaKnown RBP12.56□□□□□ -0.4
SIL1-206ENST00000505353 DCTN1Q14203 1278 aa12.56□□□□□ -0.4
SIL1-206ENST00000505353 NFE2L2Q16236 605 aa12.56□□□□□ -0.4
SIL1-206ENST00000505353 RC3H1Q5TC82 1133 aaKnown RBP12.56□□□□□ -0.4
SIL1-206ENST00000505353 SMIM5Q71RC9 77 aa12.56□□□□□ -0.4
SIL1-206ENST00000505353 TFCP2L1Q9NZI6 479 aa12.56□□□□□ -0.4
SIL1-206ENST00000505353 UBR3Q6ZT12 1888 aa12.56□□□□□ -0.4
SIL1-206ENST00000505353 DLG5Q8TDM6 1919 aa12.56□□□□□ -0.4
SIL1-206ENST00000505353 COL5A3P25940 1745 aaPredicted RBP12.56□□□□□ -0.4
SIL1-206ENST00000505353 UBR2Q8IWV8 1755 aa12.56□□□□□ -0.4
SIL1-206ENST00000505353 ZBTB7AO95365 584 aa12.55□□□□□ -0.4
SIL1-206ENST00000505353 ZNF790Q6PG37 636 aa12.55□□□□□ -0.4
SIL1-206ENST00000505353 MCM10Q7L590 875 aa12.55□□□□□ -0.4
SIL1-206ENST00000505353 SLC16A10Q8TF71 515 aa12.55□□□□□ -0.4
SIL1-206ENST00000505353 RBM42Q9BTD8 480 aaKnown RBP12.55□□□□□ -0.4
SIL1-206ENST00000505353 MTFR1LQ9H019 292 aa12.55□□□□□ -0.4
SIL1-206ENST00000505353 SPON1Q9HCB6 807 aa12.55□□□□□ -0.4
SIL1-206ENST00000505353 KCNQ3O43525 872 aa12.54□□□□□ -0.4
SIL1-206ENST00000505353 INTS5Q6P9B9 1019 aaKnown RBP12.54□□□□□ -0.4
SIL1-206ENST00000505353 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
SIL1-206ENST00000505353 PNNQ9H307 717 aaKnown RBP12.54□□□□□ -0.4
SIL1-206ENST00000505353 CNTNAP4Q9C0A0 1308 aa12.54□□□□□ -0.4
SIL1-206ENST00000505353 TJP1Q07157 1748 aa12.54□□□□□ -0.4
SIL1-206ENST00000505353 TMPOP42166 694 aaKnown RBP12.53□□□□□ -0.4
SIL1-206ENST00000505353 DNAJC10Q8IXB1 793 aa12.53□□□□□ -0.4
SIL1-206ENST00000505353 ZNF496Q96IT1 587 aaPredicted RBP12.53□□□□□ -0.4
SIL1-206ENST00000505353 ATF5Q9Y2D1 282 aaPredicted RBP12.53□□□□□ -0.4
SIL1-206ENST00000505353 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.52□□□□□ -0.41
SIL1-206ENST00000505353 RPS6KA4O75676 772 aa12.52□□□□□ -0.41
SIL1-206ENST00000505353 CYP19A1P11511 503 aaPredicted RBP12.52□□□□□ -0.41
SIL1-206ENST00000505353 SSFA2P28290 1259 aa12.52□□□□□ -0.41
SIL1-206ENST00000505353 TEFQ10587 303 aa12.52□□□□□ -0.41
SIL1-206ENST00000505353 PNISRQ8TF01 805 aaKnown RBP12.52□□□□□ -0.41
SIL1-206ENST00000505353 RUNDC1Q96C34 613 aa12.52□□□□□ -0.41
SIL1-206ENST00000505353 CRKLP46109 303 aaKnown RBP12.51□□□□□ -0.41
SIL1-206ENST00000505353 TAF7Q15545 349 aaPredicted RBP12.51□□□□□ -0.41
SIL1-206ENST00000505353 CCDC146Q8IYE0 955 aa12.51□□□□□ -0.41
SIL1-206ENST00000505353 FLAD1Q8NFF5 587 aa12.51□□□□□ -0.41
SIL1-206ENST00000505353 RTF1Q92541 710 aaKnown RBP12.51□□□□□ -0.41
SIL1-206ENST00000505353 THUMPD2Q9BTF0 503 aaKnown RBP12.51□□□□□ -0.41
SIL1-206ENST00000505353 TRIM35Q9UPQ4 493 aa12.51□□□□□ -0.41
SIL1-206ENST00000505353 BTBD11A6QL63 1104 aa12.5□□□□□ -0.41
SIL1-206ENST00000505353 GNPATO15228 680 aa12.5□□□□□ -0.41
SIL1-206ENST00000505353 RIPK4P57078 832 aa12.5□□□□□ -0.41
SIL1-206ENST00000505353 AK7Q96M32 723 aa12.5□□□□□ -0.41
SIL1-206ENST00000505353 HEG1Q9ULI3 1381 aa12.5□□□□□ -0.41
SIL1-206ENST00000505353 MAPK8IP3Q9UPT6 1336 aa12.49□□□□□ -0.41
SIL1-206ENST00000505353 ANP32CO43423 234 aa12.49□□□□□ -0.41
SIL1-206ENST00000505353 WDR43Q15061 677 aaKnown RBP eCLIP12.49□□□□□ -0.41
SIL1-206ENST00000505353 ARHGEF1Q92888 912 aaKnown RBP12.49□□□□□ -0.41
SIL1-206ENST00000505353 NEFMP07197 916 aa12.48□□□□□ -0.41
SIL1-206ENST00000505353 ADRA2BP18089 450 aa12.48□□□□□ -0.41
SIL1-206ENST00000505353 MIS18AQ9NYP9 233 aa12.48□□□□□ -0.41
SIL1-206ENST00000505353 RTCBQ9Y3I0 505 aaKnown RBP12.48□□□□□ -0.41
SIL1-206ENST00000505353 USP16Q9Y5T5 823 aa12.48□□□□□ -0.41
SIL1-206ENST00000505353 PRAMEF22A3QJZ6 481 aa12.47□□□□□ -0.41
SIL1-206ENST00000505353 PHF14O94880 888 aa12.47□□□□□ -0.41
SIL1-206ENST00000505353 TRAPPC3LQ5T215 181 aa12.47□□□□□ -0.41
SIL1-206ENST00000505353 FMNL2Q96PY5 1086 aa12.47□□□□□ -0.41
SIL1-206ENST00000505353 CCDC87Q9NVE4 849 aa12.47□□□□□ -0.41
SIL1-206ENST00000505353 RRP7AQ9Y3A4 280 aaKnown RBP12.47□□□□□ -0.41
SIL1-206ENST00000505353 SOS1Q07889 1333 aaPredicted RBP12.46□□□□□ -0.41
SIL1-206ENST00000505353 APAF1O14727 1248 aa12.46□□□□□ -0.41
SIL1-206ENST00000505353 EIF5P55010 431 aaKnown RBP12.46□□□□□ -0.41
SIL1-206ENST00000505353 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.41
SIL1-206ENST00000505353 TTC5Q8N0Z6 440 aa12.46□□□□□ -0.41
SIL1-206ENST00000505353 ZBTB1Q9Y2K1 713 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms