RNA–Protein interactions for RNA: ENST00000505218.1

GAPDHP40-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 40, humanhuman

BASIC

Gene GAPDHP40, Length 1,006 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP40-201ENST00000505218 SBF2Q86WG5 1849 aa20.29■□□□□ 0.84
GAPDHP40-201ENST00000505218 ZBED9Q6R2W3 1325 aa20.28■□□□□ 0.84
GAPDHP40-201ENST00000505218 HNRNPUQ00839 825 aaKnown RBP eCLIP20.28■□□□□ 0.84
GAPDHP40-201ENST00000505218 CALD1Q05682 793 aaKnown RBP20.27■□□□□ 0.84
GAPDHP40-201ENST00000505218 TEFQ10587 303 aa20.27■□□□□ 0.84
GAPDHP40-201ENST00000505218 CFAP44Q96MT7 982 aa20.27■□□□□ 0.84
GAPDHP40-201ENST00000505218 SPINK5Q9NQ38 1064 aaPredicted RBP20.27■□□□□ 0.84
GAPDHP40-201ENST00000505218 IFT57Q9NWB7 429 aa20.27■□□□□ 0.84
GAPDHP40-201ENST00000505218 TMOD3Q9NYL9 352 aa20.27■□□□□ 0.84
GAPDHP40-201ENST00000505218 SALL2Q9Y467 1007 aaPredicted RBP20.27■□□□□ 0.84
GAPDHP40-201ENST00000505218 TRMT2AQ8IZ69 625 aaKnown RBP20.26■□□□□ 0.83
GAPDHP40-201ENST00000505218 ITGB4P16144 1822 aa20.25■□□□□ 0.83
GAPDHP40-201ENST00000505218 PAPPAQ13219 1627 aa20.25■□□□□ 0.83
GAPDHP40-201ENST00000505218 ATG3Q9NT62 314 aa20.25■□□□□ 0.83
GAPDHP40-201ENST00000505218 HEG1Q9ULI3 1381 aa20.24■□□□□ 0.83
GAPDHP40-201ENST00000505218 TRIM37O94972 964 aa20.24■□□□□ 0.83
GAPDHP40-201ENST00000505218 ASAP1Q9ULH1 1129 aa20.24■□□□□ 0.83
GAPDHP40-201ENST00000505218 VIRMAQ69YN4 1812 aaKnown RBP20.24■□□□□ 0.83
GAPDHP40-201ENST00000505218 BTBD11A6QL63 1104 aa20.23■□□□□ 0.83
GAPDHP40-201ENST00000505218 GNAI1P63096 354 aa20.22■□□□□ 0.83
GAPDHP40-201ENST00000505218 GOLGA2Q08379 1002 aa20.22■□□□□ 0.83
GAPDHP40-201ENST00000505218 SLFN5Q08AF3 891 aa20.22■□□□□ 0.83
GAPDHP40-201ENST00000505218 ZNF790Q6PG37 636 aa20.22■□□□□ 0.83
GAPDHP40-201ENST00000505218 KCPQ6ZWJ8 1503 aa20.22■□□□□ 0.83
GAPDHP40-201ENST00000505218 PLSCR1O15162 318 aa20.21■□□□□ 0.83
GAPDHP40-201ENST00000505218 KCNQ3O43525 872 aa20.21■□□□□ 0.83
GAPDHP40-201ENST00000505218 CCDC125Q86Z20 511 aa20.21■□□□□ 0.83
GAPDHP40-201ENST00000505218 SYTL4Q96C24 671 aaPredicted RBP20.21■□□□□ 0.83
GAPDHP40-201ENST00000505218 MBIPQ9NS73 344 aa20.21■□□□□ 0.83
GAPDHP40-201ENST00000505218 MIS18AQ9NYP9 233 aa20.21■□□□□ 0.83
GAPDHP40-201ENST00000505218 TNS1Q9HBL0 1735 aaKnown RBP20.2■□□□□ 0.82
GAPDHP40-201ENST00000505218 SLC39A6Q13433 755 aa20.2■□□□□ 0.82
GAPDHP40-201ENST00000505218 SMARCC1Q92922 1105 aaPredicted RBP20.2■□□□□ 0.82
GAPDHP40-201ENST00000505218 KDM3BQ7LBC6 1761 aa20.2■□□□□ 0.82
GAPDHP40-201ENST00000505218 BTAF1O14981 1849 aa20.19■□□□□ 0.82
GAPDHP40-201ENST00000505218 E9PSI1 815 aa20.19■□□□□ 0.82
GAPDHP40-201ENST00000505218 EIF4A1P60842 406 aaKnown RBP20.19■□□□□ 0.82
GAPDHP40-201ENST00000505218 CDCA7LQ96GN5 454 aa20.19■□□□□ 0.82
GAPDHP40-201ENST00000505218 SLC4A9Q96Q91 983 aa20.19■□□□□ 0.82
GAPDHP40-201ENST00000505218 TSPYL4Q9UJ04 414 aa20.19■□□□□ 0.82
GAPDHP40-201ENST00000505218 UPF1Q92900 1129 aaKnown RBP eCLIP20.18■□□□□ 0.82
GAPDHP40-201ENST00000505218 PALLDQ8WX93 1383 aa20.18■□□□□ 0.82
GAPDHP40-201ENST00000505218 UBR2Q8IWV8 1755 aa20.18■□□□□ 0.82
GAPDHP40-201ENST00000505218 DUSP27Q5VZP5 1158 aa20.17■□□□□ 0.82
GAPDHP40-201ENST00000505218 ZNF496Q96IT1 587 aaPredicted RBP20.17■□□□□ 0.82
GAPDHP40-201ENST00000505218 FANCIQ9NVI1 1328 aa20.17■□□□□ 0.82
GAPDHP40-201ENST00000505218 VSIG10Q8N0Z9 540 aa20.16■□□□□ 0.82
GAPDHP40-201ENST00000505218 PROM2Q8N271 834 aa20.16■□□□□ 0.82
GAPDHP40-201ENST00000505218 TSR2Q969E8 191 aaKnown RBP20.15■□□□□ 0.82
GAPDHP40-201ENST00000505218 CAMKK2Q96RR4 588 aa20.15■□□□□ 0.82
GAPDHP40-201ENST00000505218 MYH16Q9H6N6 1097 aa20.15■□□□□ 0.82
GAPDHP40-201ENST00000505218 CICQ96RK0 1608 aaPredicted RBP20.15■□□□□ 0.82
GAPDHP40-201ENST00000505218 ZNF831Q5JPB2 1677 aa20.15■□□□□ 0.82
GAPDHP40-201ENST00000505218 LOC102724428A0A0B4J2F2 783 aa20.14■□□□□ 0.81
GAPDHP40-201ENST00000505218 APBA3O96018 575 aa20.14■□□□□ 0.81
GAPDHP40-201ENST00000505218 SIK1P57059 783 aa20.14■□□□□ 0.81
GAPDHP40-201ENST00000505218 RGPD3A6NKT7 1758 aaPredicted RBP20.13■□□□□ 0.81
GAPDHP40-201ENST00000505218 RGPD4Q7Z3J3 1758 aa20.13■□□□□ 0.81
GAPDHP40-201ENST00000505218 LY75O60449 1722 aa20.13■□□□□ 0.81
GAPDHP40-201ENST00000505218 GIGYF1O75420 1035 aaPredicted RBP20.13■□□□□ 0.81
GAPDHP40-201ENST00000505218 TTC5Q8N0Z6 440 aa20.13■□□□□ 0.81
GAPDHP40-201ENST00000505218 FMNL2Q96PY5 1086 aa20.13■□□□□ 0.81
GAPDHP40-201ENST00000505218 LAS1LQ9Y4W2 734 aaKnown RBP20.13■□□□□ 0.81
GAPDHP40-201ENST00000505218 SOS1Q07889 1333 aaPredicted RBP20.11■□□□□ 0.81
GAPDHP40-201ENST00000505218 HOXB7P09629 217 aa20.11■□□□□ 0.81
GAPDHP40-201ENST00000505218 KRT24Q2M2I5 525 aa20.11■□□□□ 0.81
GAPDHP40-201ENST00000505218 SLC27A3Q5K4L6 730 aa20.11■□□□□ 0.81
GAPDHP40-201ENST00000505218 C8orf58Q8NAV2 365 aa20.11■□□□□ 0.81
GAPDHP40-201ENST00000505218 LRRC4BQ9NT99 713 aa20.11■□□□□ 0.81
GAPDHP40-201ENST00000505218 PTCD1O75127 700 aaKnown RBP20.1■□□□□ 0.81
GAPDHP40-201ENST00000505218 ITPK1Q13572 414 aa20.1■□□□□ 0.81
GAPDHP40-201ENST00000505218 SNRPA1P09661 255 aaKnown RBP20.09■□□□□ 0.81
GAPDHP40-201ENST00000505218 TXNRD1Q16881 649 aa20.09■□□□□ 0.81
GAPDHP40-201ENST00000505218 TSPYL6Q8N831 410 aa20.09■□□□□ 0.81
GAPDHP40-201ENST00000505218 YTHDC1Q96MU7 727 aaKnown RBP20.09■□□□□ 0.81
GAPDHP40-201ENST00000505218 PRAMEF22A3QJZ6 481 aa20.08■□□□□ 0.81
GAPDHP40-201ENST00000505218 EXOSC9Q06265 439 aaKnown RBP20.08■□□□□ 0.81
GAPDHP40-201ENST00000505218 KAT6BQ8WYB5 2073 aa20.07■□□□□ 0.8
GAPDHP40-201ENST00000505218 VAMP4O75379 141 aa20.07■□□□□ 0.8
GAPDHP40-201ENST00000505218 BAG6P46379 1132 aa20.07■□□□□ 0.8
GAPDHP40-201ENST00000505218 EN1Q05925 392 aaPredicted RBP20.07■□□□□ 0.8
GAPDHP40-201ENST00000505218 DEFB132Q7Z7B7 95 aa20.07■□□□□ 0.8
GAPDHP40-201ENST00000505218 RBM42Q9BTD8 480 aaKnown RBP20.07■□□□□ 0.8
GAPDHP40-201ENST00000505218 TEX13AQ9BXU3 409 aaPredicted RBP20.07■□□□□ 0.8
GAPDHP40-201ENST00000505218 TJP1Q07157 1748 aa20.07■□□□□ 0.8
GAPDHP40-201ENST00000505218 CYP19A1P11511 503 aaPredicted RBP20.06■□□□□ 0.8
GAPDHP40-201ENST00000505218 ATP6V1AP38606 617 aa20.06■□□□□ 0.8
GAPDHP40-201ENST00000505218 SF3B2Q13435 895 aaKnown RBP20.06■□□□□ 0.8
GAPDHP40-201ENST00000505218 EZH2Q15910 746 aaKnown RBP20.06■□□□□ 0.8
GAPDHP40-201ENST00000505218 DNAJC10Q8IXB1 793 aa20.06■□□□□ 0.8
GAPDHP40-201ENST00000505218 CCNL1Q9UK58 526 aaPredicted RBP20.06■□□□□ 0.8
GAPDHP40-201ENST00000505218 USP16Q9Y5T5 823 aa20.06■□□□□ 0.8
GAPDHP40-201ENST00000505218 CT47B1P0C2W7 299 aaPredicted RBP20.05■□□□□ 0.8
GAPDHP40-201ENST00000505218 LINC00116Q8NCU8 138 aa20.05■□□□□ 0.8
GAPDHP40-201ENST00000505218 C5P01031 1676 aa20.04■□□□□ 0.8
GAPDHP40-201ENST00000505218 RC3H1Q5TC82 1133 aaKnown RBP20.04■□□□□ 0.8
GAPDHP40-201ENST00000505218 CNTNAP4Q9C0A0 1308 aa20.03■□□□□ 0.8
GAPDHP40-201ENST00000505218 KCNQ4P56696 695 aa20.03■□□□□ 0.8
GAPDHP40-201ENST00000505218 TWISTNBQ3B726 338 aaPredicted RBP20.03■□□□□ 0.8
GAPDHP40-201ENST00000505218 RREB1Q92766 1687 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 500.7 ms