RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 KCNQ2O43526 872 aa12.22□□□□□ -0.45
CDH6-202ENST00000504835 PDGFDQ9GZP0 370 aaPredicted RBP12.22□□□□□ -0.45
CDH6-202ENST00000504835 CD163L1Q9NR16 1453 aa12.22□□□□□ -0.45
CDH6-202ENST00000504835 C11orf95C9JLR9 678 aaPredicted RBP12.22□□□□□ -0.45
CDH6-202ENST00000504835 BCL11BQ9C0K0 894 aaPredicted RBP12.22□□□□□ -0.45
CDH6-202ENST00000504835 SPON1Q9HCB6 807 aa12.22□□□□□ -0.45
CDH6-202ENST00000504835 PAPPAQ13219 1627 aa12.21□□□□□ -0.45
CDH6-202ENST00000504835 ROCK2O75116 1388 aaKnown RBP12.21□□□□□ -0.45
CDH6-202ENST00000504835 CARD10Q9BWT7 1032 aa12.21□□□□□ -0.46
CDH6-202ENST00000504835 TTC21AQ8NDW8 1320 aa12.21□□□□□ -0.46
CDH6-202ENST00000504835 UTRNP46939 3433 aa12.2□□□□□ -0.46
CDH6-202ENST00000504835 RGPD2P0DJD1 1756 aa12.2□□□□□ -0.46
CDH6-202ENST00000504835 PBX2P40425 430 aa12.2□□□□□ -0.46
CDH6-202ENST00000504835 NINLQ9Y2I6 1382 aa12.2□□□□□ -0.46
CDH6-202ENST00000504835 TNS2Q63HR2 1409 aa12.2□□□□□ -0.46
CDH6-202ENST00000504835 KCNH5Q8NCM2 988 aa12.19□□□□□ -0.46
CDH6-202ENST00000504835 KTN1Q86UP2 1357 aaKnown RBP12.19□□□□□ -0.46
CDH6-202ENST00000504835 TUBGCP6Q96RT7 1819 aa12.19□□□□□ -0.46
CDH6-202ENST00000504835 CHD4Q14839 1912 aa12.19□□□□□ -0.46
CDH6-202ENST00000504835 KHSRPQ92945 711 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDH6-202ENST00000504835 CDCA7Q9BWT1 371 aaPredicted RBP12.18□□□□□ -0.46
CDH6-202ENST00000504835 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
CDH6-202ENST00000504835 SHANK3Q9BYB0 1731 aa12.18□□□□□ -0.46
CDH6-202ENST00000504835 SBNO2Q9Y2G9 1366 aa12.18□□□□□ -0.46
CDH6-202ENST00000504835 PPP1R1BQ9UD71 204 aaPredicted RBP12.18□□□□□ -0.46
CDH6-202ENST00000504835 QSER1Q2KHR3 1735 aa12.17□□□□□ -0.46
CDH6-202ENST00000504835 CCDC7Q96M83 1385 aa12.17□□□□□ -0.46
CDH6-202ENST00000504835 CSB-PGBD3P0DP91 1061 aa12.17□□□□□ -0.46
CDH6-202ENST00000504835 YY1P25490 414 aa12.17□□□□□ -0.46
CDH6-202ENST00000504835 NEUROD1Q13562 356 aa12.17□□□□□ -0.46
CDH6-202ENST00000504835 COL24A1Q17RW2 1714 aa12.16□□□□□ -0.46
CDH6-202ENST00000504835 FAM208AQ9UK61 1670 aaKnown RBP12.16□□□□□ -0.46
CDH6-202ENST00000504835 TXNRD1Q16881 649 aa12.16□□□□□ -0.46
CDH6-202ENST00000504835 EXOC5O00471 708 aa12.15□□□□□ -0.46
CDH6-202ENST00000504835 ZBTB7AO95365 584 aa12.15□□□□□ -0.46
CDH6-202ENST00000504835 NME9Q86XW9 330 aa12.15□□□□□ -0.46
CDH6-202ENST00000504835 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDH6-202ENST00000504835 DOT1LQ8TEK3 1739 aa12.14□□□□□ -0.47
CDH6-202ENST00000504835 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
CDH6-202ENST00000504835 LY75O60449 1722 aa12.13□□□□□ -0.47
CDH6-202ENST00000504835 SLC15A2Q16348 729 aa12.13□□□□□ -0.47
CDH6-202ENST00000504835 ACSBG1Q96GR2 724 aa12.13□□□□□ -0.47
CDH6-202ENST00000504835 SLC12A5Q9H2X9 1139 aa12.12□□□□□ -0.47
CDH6-202ENST00000504835 STK32BQ9NY57 414 aa12.12□□□□□ -0.47
CDH6-202ENST00000504835 EDC4Q6P2E9 1401 aaKnown RBP12.12□□□□□ -0.47
CDH6-202ENST00000504835 A0A1W2PP64 1363 aa12.12□□□□□ -0.47
CDH6-202ENST00000504835 NUDT7P0C024 238 aa12.11□□□□□ -0.47
CDH6-202ENST00000504835 ANKRD24Q8TF21 1146 aa12.1□□□□□ -0.47
CDH6-202ENST00000504835 NLRP2Q9NX02 1062 aa12.1□□□□□ -0.47
CDH6-202ENST00000504835 GOLGB1Q14789 3259 aaKnown RBP12.1□□□□□ -0.47
CDH6-202ENST00000504835 KIF3CO14782 793 aa12.09□□□□□ -0.47
CDH6-202ENST00000504835 IL2RBP14784 551 aa12.09□□□□□ -0.47
CDH6-202ENST00000504835 CARD11Q9BXL7 1154 aa12.09□□□□□ -0.47
CDH6-202ENST00000504835 HCSTQ9UBK5 93 aa12.09□□□□□ -0.47
CDH6-202ENST00000504835 STK24Q9Y6E0 443 aa12.09□□□□□ -0.47
CDH6-202ENST00000504835 C2orf72A6NCS6 295 aa12.09□□□□□ -0.47
CDH6-202ENST00000504835 ZNF827Q17R98 1081 aa12.09□□□□□ -0.47
CDH6-202ENST00000504835 TMC1Q8TDI8 760 aa12.09□□□□□ -0.47
CDH6-202ENST00000504835 FHDC1Q9C0D6 1143 aaPredicted RBP12.09□□□□□ -0.47
CDH6-202ENST00000504835 SLC34A2O95436 690 aa12.08□□□□□ -0.48
CDH6-202ENST00000504835 SYT17Q9BSW7 474 aa12.08□□□□□ -0.48
CDH6-202ENST00000504835 MTFR1LQ9H019 292 aa12.08□□□□□ -0.48
CDH6-202ENST00000504835 LRRC4BQ9NT99 713 aa12.08□□□□□ -0.48
CDH6-202ENST00000504835 HDGFL2Q7Z4V5 671 aaPredicted RBP12.07□□□□□ -0.48
CDH6-202ENST00000504835 PLA2G2EQ9NZK7 142 aa12.07□□□□□ -0.48
CDH6-202ENST00000504835 LHX6Q9UPM6 363 aa12.07□□□□□ -0.48
CDH6-202ENST00000504835 KIF20BQ96Q89 1820 aa12.07□□□□□ -0.48
CDH6-202ENST00000504835 TAF1LQ8IZX4 1826 aa12.06□□□□□ -0.48
CDH6-202ENST00000504835 PCDHGA4Q9Y5G9 962 aa12.06□□□□□ -0.48
CDH6-202ENST00000504835 IP6K1Q92551 441 aa12.05□□□□□ -0.48
CDH6-202ENST00000504835 TESK2Q96S53 571 aa12.05□□□□□ -0.48
CDH6-202ENST00000504835 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
CDH6-202ENST00000504835 NSD2O96028 1365 aa12.05□□□□□ -0.48
CDH6-202ENST00000504835 MEGF6O75095 1541 aa12.05□□□□□ -0.48
CDH6-202ENST00000504835 ITGB4P16144 1822 aa12.05□□□□□ -0.48
CDH6-202ENST00000504835 FBLN1P23142 703 aa12.05□□□□□ -0.48
CDH6-202ENST00000504835 TMC2Q8TDI7 906 aa12.05□□□□□ -0.48
CDH6-202ENST00000504835 PUS7Q96PZ0 661 aaKnown RBP12.05□□□□□ -0.48
CDH6-202ENST00000504835 MAP3K5Q99683 1374 aa12.04□□□□□ -0.48
CDH6-202ENST00000504835 LTV1Q96GA3 475 aaPredicted RBP12.04□□□□□ -0.48
CDH6-202ENST00000504835 TERF2IPQ9NYB0 399 aa12.04□□□□□ -0.48
CDH6-202ENST00000504835 MAP3K19Q56UN5 1328 aa12.04□□□□□ -0.48
CDH6-202ENST00000504835 TOGARAM1Q9Y4F4 1720 aa12.03□□□□□ -0.48
CDH6-202ENST00000504835 ZNF784Q8NCA9 323 aaPredicted RBP12.03□□□□□ -0.48
CDH6-202ENST00000504835 ARXQ96QS3 562 aa12.03□□□□□ -0.48
CDH6-202ENST00000504835 C5P01031 1676 aa12.03□□□□□ -0.48
CDH6-202ENST00000504835 STK25O00506 426 aa12.02□□□□□ -0.49
CDH6-202ENST00000504835 HOXC9P31274 260 aa12.02□□□□□ -0.49
CDH6-202ENST00000504835 KCNQ4P56696 695 aa12.02□□□□□ -0.49
CDH6-202ENST00000504835 DDX54Q8TDD1 881 aaKnown RBP12.02□□□□□ -0.49
CDH6-202ENST00000504835 TONSLQ96HA7 1378 aa12.02□□□□□ -0.49
CDH6-202ENST00000504835 PNPLA7Q6ZV29 1317 aa12.01□□□□□ -0.49
CDH6-202ENST00000504835 ANKRD36BQ8N2N9 1353 aa12.01□□□□□ -0.49
CDH6-202ENST00000504835 ST20-MTHFSA0A0A6YYL1 179 aa12.01□□□□□ -0.49
CDH6-202ENST00000504835 POTEEQ6S8J3 1075 aa12.01□□□□□ -0.49
CDH6-202ENST00000504835 ARHGAP33O14559 1287 aa12□□□□□ -0.49
CDH6-202ENST00000504835 PRIM1P49642 420 aaKnown RBP12□□□□□ -0.49
CDH6-202ENST00000504835 SLC27A3Q5K4L6 730 aa12□□□□□ -0.49
CDH6-202ENST00000504835 PKD1L3Q7Z443 1732 aa12□□□□□ -0.49
CDH6-202ENST00000504835 ANKRD26Q9UPS8 1709 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms