RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 SLC8A1P32418 973 aa12.04□□□□□ -0.48
ITGA1-203ENST00000504669 TAF4BQ92750 862 aa12.04□□□□□ -0.48
ITGA1-203ENST00000504669 UPF3BQ9BZI7 483 aaKnown RBP12.04□□□□□ -0.48
ITGA1-203ENST00000504669 SERPINA10Q9UK55 444 aa12.04□□□□□ -0.48
ITGA1-203ENST00000504669 ZNF500O60304 480 aaPredicted RBP12.04□□□□□ -0.48
ITGA1-203ENST00000504669 HDXQ7Z353 690 aa12.04□□□□□ -0.48
ITGA1-203ENST00000504669 CEP57L1Q8IYX8 460 aa12.04□□□□□ -0.48
ITGA1-203ENST00000504669 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.04□□□□□ -0.48
ITGA1-203ENST00000504669 RMDN2Q96LZ7 410 aa12.04□□□□□ -0.48
ITGA1-203ENST00000504669 CWC25Q9NXE8 425 aaPredicted RBP12.04□□□□□ -0.48
ITGA1-203ENST00000504669 AMOTQ4VCS5 1084 aa12.03□□□□□ -0.48
ITGA1-203ENST00000504669 GOLGA1Q92805 767 aa12.03□□□□□ -0.48
ITGA1-203ENST00000504669 LRRD1A4D1F6 860 aa12.03□□□□□ -0.48
ITGA1-203ENST00000504669 GTF2E1P29083 439 aaPredicted RBP12.03□□□□□ -0.48
ITGA1-203ENST00000504669 NLRP5P59047 1200 aa12.03□□□□□ -0.48
ITGA1-203ENST00000504669 CCDC152Q4G0S7 254 aa12.03□□□□□ -0.48
ITGA1-203ENST00000504669 VPS41P49754 854 aa12.03□□□□□ -0.48
ITGA1-203ENST00000504669 NEDD9Q14511 834 aa12.03□□□□□ -0.48
ITGA1-203ENST00000504669 SNCBQ16143 134 aa12.03□□□□□ -0.48
ITGA1-203ENST00000504669 CCDC83Q8IWF9 413 aa12.03□□□□□ -0.48
ITGA1-203ENST00000504669 ZFYVE27Q5T4F4 411 aa12.03□□□□□ -0.48
ITGA1-203ENST00000504669 ZKSCAN2Q63HK3 967 aa12.03□□□□□ -0.48
ITGA1-203ENST00000504669 ATG3Q9NT62 314 aa12.03□□□□□ -0.48
ITGA1-203ENST00000504669 MYBBP1AQ9BQG0 1328 aaKnown RBP12.03□□□□□ -0.48
ITGA1-203ENST00000504669 KIF15Q9NS87 1388 aa12.03□□□□□ -0.48
ITGA1-203ENST00000504669 CTCFLQ8NI51 663 aaPredicted RBP12.02□□□□□ -0.48
ITGA1-203ENST00000504669 NUCB1Q02818 461 aa12.02□□□□□ -0.49
ITGA1-203ENST00000504669 GOLGA5Q8TBA6 731 aa12.02□□□□□ -0.49
ITGA1-203ENST00000504669 FAF1Q9UNN5 650 aaPredicted RBP12.02□□□□□ -0.49
ITGA1-203ENST00000504669 LIMCH1Q9UPQ0 1083 aa12.02□□□□□ -0.49
ITGA1-203ENST00000504669 CCDC129Q6ZRS4 1044 aa12.02□□□□□ -0.49
ITGA1-203ENST00000504669 RRP15Q9Y3B9 282 aaKnown RBP12.02□□□□□ -0.49
ITGA1-203ENST00000504669 CAPN7Q9Y6W3 813 aa12.02□□□□□ -0.49
ITGA1-203ENST00000504669 IRX5P78411 483 aaPredicted RBP12.02□□□□□ -0.49
ITGA1-203ENST00000504669 ACRBPQ8NEB7 543 aa12.02□□□□□ -0.49
ITGA1-203ENST00000504669 CETN3O15182 167 aa12.01□□□□□ -0.49
ITGA1-203ENST00000504669 ZC3H6P61129 1189 aaKnown RBP12.01□□□□□ -0.49
ITGA1-203ENST00000504669 CTAGE6Q86UF2 777 aa12.01□□□□□ -0.49
ITGA1-203ENST00000504669 SMC6Q96SB8 1091 aa12.01□□□□□ -0.49
ITGA1-203ENST00000504669 RIPOR2Q9Y4F9 1068 aa12.01□□□□□ -0.49
ITGA1-203ENST00000504669 KIF2CQ99661 725 aa12.01□□□□□ -0.49
ITGA1-203ENST00000504669 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.01□□□□□ -0.49
ITGA1-203ENST00000504669 GMNNO75496 209 aa12.01□□□□□ -0.49
ITGA1-203ENST00000504669 MORC1Q86VD1 984 aa12.01□□□□□ -0.49
ITGA1-203ENST00000504669 RAB3IL1Q8TBN0 382 aa12.01□□□□□ -0.49
ITGA1-203ENST00000504669 TPD52L2O43399 206 aaKnown RBP12.01□□□□□ -0.49
ITGA1-203ENST00000504669 TNPO1Q92973 898 aaKnown RBP12.01□□□□□ -0.49
ITGA1-203ENST00000504669 IFT74Q96LB3 600 aa12.01□□□□□ -0.49
ITGA1-203ENST00000504669 NBPF3Q9H094 633 aa12.01□□□□□ -0.49
ITGA1-203ENST00000504669 OAS2P29728 719 aaKnown RBP12□□□□□ -0.49
ITGA1-203ENST00000504669 LRSAM1Q6UWE0 723 aa12□□□□□ -0.49
ITGA1-203ENST00000504669 TRIM7Q9C029 511 aa12□□□□□ -0.49
ITGA1-203ENST00000504669 CEP85LQ5SZL2 805 aa12□□□□□ -0.49
ITGA1-203ENST00000504669 STMN2Q93045 179 aa12□□□□□ -0.49
ITGA1-203ENST00000504669 STIM2Q9P246 746 aa12□□□□□ -0.49
ITGA1-203ENST00000504669 CASTP20810 708 aaKnown RBP12□□□□□ -0.49
ITGA1-203ENST00000504669 CCDC150Q8NCX0 1101 aa12□□□□□ -0.49
ITGA1-203ENST00000504669 PUS7Q96PZ0 661 aaKnown RBP12□□□□□ -0.49
ITGA1-203ENST00000504669 STAG3Q9UJ98 1225 aa12□□□□□ -0.49
ITGA1-203ENST00000504669 DDX19BQ9UMR2 479 aa12□□□□□ -0.49
ITGA1-203ENST00000504669 IKBKGQ9Y6K9 419 aa12□□□□□ -0.49
ITGA1-203ENST00000504669 TRIM68Q6AZZ1 485 aa12□□□□□ -0.49
ITGA1-203ENST00000504669 TTC14Q96N46 770 aa12□□□□□ -0.49
ITGA1-203ENST00000504669 E2F4Q16254 413 aa11.99□□□□□ -0.49
ITGA1-203ENST00000504669 KLHDC4Q8TBB5 520 aa11.99□□□□□ -0.49
ITGA1-203ENST00000504669 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.99□□□□□ -0.49
ITGA1-203ENST00000504669 PALMDQ9NP74 551 aa11.99□□□□□ -0.49
ITGA1-203ENST00000504669 CAMK4Q16566 473 aa11.99□□□□□ -0.49
ITGA1-203ENST00000504669 STMN1P16949 149 aa11.99□□□□□ -0.49
ITGA1-203ENST00000504669 CCDC178Q5BJE1 867 aa11.99□□□□□ -0.49
ITGA1-203ENST00000504669 RASEFQ8IZ41 740 aa11.99□□□□□ -0.49
ITGA1-203ENST00000504669 SREK1Q8WXA9 508 aaKnown RBP11.99□□□□□ -0.49
ITGA1-203ENST00000504669 SETDB1Q15047 1291 aa11.99□□□□□ -0.49
ITGA1-203ENST00000504669 IMMTQ16891 758 aaKnown RBP11.99□□□□□ -0.49
ITGA1-203ENST00000504669 GKAP1Q5VSY0 366 aaPredicted RBP11.99□□□□□ -0.49
ITGA1-203ENST00000504669 VCX3BQ9H321 246 aa11.99□□□□□ -0.49
ITGA1-203ENST00000504669 VCX3AQ9NNX9 186 aa11.99□□□□□ -0.49
ITGA1-203ENST00000504669 RIOK3O14730 519 aaKnown RBP11.99□□□□□ -0.49
ITGA1-203ENST00000504669 ZEB2O60315 1214 aa11.99□□□□□ -0.49
ITGA1-203ENST00000504669 DIAPH1O60610 1272 aaKnown RBP11.99□□□□□ -0.49
ITGA1-203ENST00000504669 SART3Q15020 963 aaKnown RBP11.99□□□□□ -0.49
ITGA1-203ENST00000504669 TMCO4Q5TGY1 634 aa11.99□□□□□ -0.49
ITGA1-203ENST00000504669 ODF2LQ9ULJ1 636 aa11.99□□□□□ -0.49
ITGA1-203ENST00000504669 PSMD7P51665 324 aa11.98□□□□□ -0.49
ITGA1-203ENST00000504669 COG7P83436 770 aa11.98□□□□□ -0.49
ITGA1-203ENST00000504669 RNF10Q8N5U6 811 aaKnown RBP11.98□□□□□ -0.49
ITGA1-203ENST00000504669 NUB1Q9Y5A7 615 aa11.98□□□□□ -0.49
ITGA1-203ENST00000504669 RSF1Q96T23 1441 aaPredicted RBP11.98□□□□□ -0.49
ITGA1-203ENST00000504669 FAM160A1Q05DH4 1040 aa11.98□□□□□ -0.49
ITGA1-203ENST00000504669 PDCD2Q16342 344 aaPredicted RBP11.98□□□□□ -0.49
ITGA1-203ENST00000504669 ZCRB1Q8TBF4 217 aaKnown RBP11.98□□□□□ -0.49
ITGA1-203ENST00000504669 NAA15Q9BXJ9 866 aaKnown RBP11.98□□□□□ -0.49
ITGA1-203ENST00000504669 SAMD15Q9P1V8 674 aa11.98□□□□□ -0.49
ITGA1-203ENST00000504669 CPLX1O14810 134 aa11.98□□□□□ -0.49
ITGA1-203ENST00000504669 CIB2O75838 187 aa11.98□□□□□ -0.49
ITGA1-203ENST00000504669 ZFXP17010 805 aaPredicted RBP11.98□□□□□ -0.49
ITGA1-203ENST00000504669 EFCAB13Q8IY85 973 aa11.98□□□□□ -0.49
ITGA1-203ENST00000504669 NEK11Q8NG66 645 aa11.98□□□□□ -0.49
ITGA1-203ENST00000504669 CCDC12Q8WUD4 166 aaPredicted RBP11.98□□□□□ -0.49
ITGA1-203ENST00000504669 ERO1AQ96HE7 468 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms