RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 CCDC7Q96M83 1385 aa11.07□□□□□ -0.64
RFC1-207ENST00000504554 HSP90AB2PQ58FF8 381 aa11.07□□□□□ -0.64
RFC1-207ENST00000504554 SF3B2Q13435 895 aaKnown RBP11.06□□□□□ -0.64
RFC1-207ENST00000504554 EZH2Q15910 746 aaKnown RBP11.06□□□□□ -0.64
RFC1-207ENST00000504554 TMEM121BQ9BXQ6 578 aaPredicted RBP11.06□□□□□ -0.64
RFC1-207ENST00000504554 KIF20BQ96Q89 1820 aa11.06□□□□□ -0.64
RFC1-207ENST00000504554 WNK3Q9BYP7 1800 aa11.06□□□□□ -0.64
RFC1-207ENST00000504554 SRCAPQ6ZRS2 3230 aa11.06□□□□□ -0.64
RFC1-207ENST00000504554 TNS1Q9HBL0 1735 aaKnown RBP11.06□□□□□ -0.64
RFC1-207ENST00000504554 RTL1A6NKG5 1358 aa11.05□□□□□ -0.64
RFC1-207ENST00000504554 NBPF6Q5VWK0 638 aa11.05□□□□□ -0.64
RFC1-207ENST00000504554 USHBP1Q8N6Y0 703 aa11.05□□□□□ -0.64
RFC1-207ENST00000504554 NBPF4Q96M43 638 aa11.05□□□□□ -0.64
RFC1-207ENST00000504554 CAMKK2Q96RR4 588 aa11.05□□□□□ -0.64
RFC1-207ENST00000504554 CDCA7Q9BWT1 371 aaPredicted RBP11.05□□□□□ -0.64
RFC1-207ENST00000504554 CGNL1Q0VF96 1302 aa11.05□□□□□ -0.64
RFC1-207ENST00000504554 OVOS2A0A0G2JMS6 1433 aa11.04□□□□□ -0.64
RFC1-207ENST00000504554 TNS2Q63HR2 1409 aa11.04□□□□□ -0.64
RFC1-207ENST00000504554 EXOC5O00471 708 aa11.04□□□□□ -0.64
RFC1-207ENST00000504554 APBA3O96018 575 aa11.04□□□□□ -0.64
RFC1-207ENST00000504554 IL2RBP14784 551 aa11.04□□□□□ -0.64
RFC1-207ENST00000504554 BAG6P46379 1132 aa11.04□□□□□ -0.64
RFC1-207ENST00000504554 CFAP44Q96MT7 982 aa11.04□□□□□ -0.64
RFC1-207ENST00000504554 POLKQ9UBT6 870 aa11.04□□□□□ -0.64
RFC1-207ENST00000504554 TAOK2Q9UL54 1235 aa11.04□□□□□ -0.64
RFC1-207ENST00000504554 FAM208AQ9UK61 1670 aaKnown RBP11.04□□□□□ -0.64
RFC1-207ENST00000504554 RGPD1P0DJD0 1748 aa11.04□□□□□ -0.64
RFC1-207ENST00000504554 INSRP06213 1382 aa11.03□□□□□ -0.64
RFC1-207ENST00000504554 RIOK3O14730 519 aaKnown RBP11.03□□□□□ -0.64
RFC1-207ENST00000504554 TNNT2P45379 298 aaPredicted RBP11.03□□□□□ -0.64
RFC1-207ENST00000504554 MEGF6O75095 1541 aa11.03□□□□□ -0.64
RFC1-207ENST00000504554 WASHC2AQ641Q2 1341 aa11.03□□□□□ -0.64
RFC1-207ENST00000504554 FLT4P35916 1363 aa11.03□□□□□ -0.64
RFC1-207ENST00000504554 BCL9O00512 1426 aa11.02□□□□□ -0.64
RFC1-207ENST00000504554 KCNQ2O43526 872 aa11.02□□□□□ -0.65
RFC1-207ENST00000504554 MARVELD3Q96A59 401 aa11.02□□□□□ -0.65
RFC1-207ENST00000504554 PPM1GO15355 546 aaPredicted RBP11.01□□□□□ -0.65
RFC1-207ENST00000504554 PER1O15534 1290 aaPredicted RBP11.01□□□□□ -0.65
RFC1-207ENST00000504554 ACSBG1Q96GR2 724 aa11.01□□□□□ -0.65
RFC1-207ENST00000504554 BOLA1Q9Y3E2 137 aa11.01□□□□□ -0.65
RFC1-207ENST00000504554 RGPD2P0DJD1 1756 aa11□□□□□ -0.65
RFC1-207ENST00000504554 PSDA5PKW4 1024 aaPredicted RBP11□□□□□ -0.65
RFC1-207ENST00000504554 EFCAB3Q8N7B9 438 aa11□□□□□ -0.65
RFC1-207ENST00000504554 DDX54Q8TDD1 881 aaKnown RBP11□□□□□ -0.65
RFC1-207ENST00000504554 BCL11BQ9C0K0 894 aaPredicted RBP11□□□□□ -0.65
RFC1-207ENST00000504554 KIF24Q5T7B8 1368 aa11□□□□□ -0.65
RFC1-207ENST00000504554 ANKRD26Q9UPS8 1709 aa10.98□□□□□ -0.65
RFC1-207ENST00000504554 EIF4A2Q14240 407 aaKnown RBP10.98□□□□□ -0.65
RFC1-207ENST00000504554 EYA1Q99502 592 aa10.98□□□□□ -0.65
RFC1-207ENST00000504554 KNSTRNQ9Y448 316 aa10.98□□□□□ -0.65
RFC1-207ENST00000504554 NSD2O96028 1365 aa10.98□□□□□ -0.65
RFC1-207ENST00000504554 NCAPD2Q15021 1401 aa10.98□□□□□ -0.65
RFC1-207ENST00000504554 SBF2Q86WG5 1849 aa10.98□□□□□ -0.65
RFC1-207ENST00000504554 R3HDM1Q15032 1099 aaKnown RBP10.97□□□□□ -0.65
RFC1-207ENST00000504554 MORC1Q86VD1 984 aa10.97□□□□□ -0.65
RFC1-207ENST00000504554 ZCRB1Q8TBF4 217 aaKnown RBP10.97□□□□□ -0.65
RFC1-207ENST00000504554 SMG6Q86US8 1419 aaKnown RBP10.97□□□□□ -0.65
RFC1-207ENST00000504554 SHANK3Q9BYB0 1731 aa10.96□□□□□ -0.65
RFC1-207ENST00000504554 RREB1Q92766 1687 aa10.96□□□□□ -0.65
RFC1-207ENST00000504554 PLSCR1O15162 318 aa10.96□□□□□ -0.65
RFC1-207ENST00000504554 ANO8Q9HCE9 1232 aaPredicted RBP10.96□□□□□ -0.65
RFC1-207ENST00000504554 PARD3Q8TEW0 1356 aa10.95□□□□□ -0.66
RFC1-207ENST00000504554 G3V3G9 751 aa10.95□□□□□ -0.66
RFC1-207ENST00000504554 TATP17735 454 aaPredicted RBP10.95□□□□□ -0.66
RFC1-207ENST00000504554 CC2D1BQ5T0F9 858 aaKnown RBP10.95□□□□□ -0.66
RFC1-207ENST00000504554 NUP188Q5SRE5 1749 aa10.95□□□□□ -0.66
RFC1-207ENST00000504554 MAP2P11137 1827 aaKnown RBP10.94□□□□□ -0.66
RFC1-207ENST00000504554 CYP27B1O15528 508 aa10.94□□□□□ -0.66
RFC1-207ENST00000504554 CNGB1Q14028 1251 aaPredicted RBP10.94□□□□□ -0.66
RFC1-207ENST00000504554 RAPGEF4Q8WZA2 1011 aa10.94□□□□□ -0.66
RFC1-207ENST00000504554 TSHZ2Q9NRE2 1034 aa10.94□□□□□ -0.66
RFC1-207ENST00000504554 NHSQ6T4R5 1651 aa10.94□□□□□ -0.66
RFC1-207ENST00000504554 PRIM1P49642 420 aaKnown RBP10.93□□□□□ -0.66
RFC1-207ENST00000504554 IGSF1Q8N6C5 1336 aa10.92□□□□□ -0.66
RFC1-207ENST00000504554 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.92□□□□□ -0.66
RFC1-207ENST00000504554 IL13P35225 146 aa10.92□□□□□ -0.66
RFC1-207ENST00000504554 EMP3P54852 163 aa10.92□□□□□ -0.66
RFC1-207ENST00000504554 TXNRD1Q16881 649 aa10.92□□□□□ -0.66
RFC1-207ENST00000504554 AEBP1Q8IUX7 1158 aa10.92□□□□□ -0.66
RFC1-207ENST00000504554 ZFP91Q96JP5 570 aaPredicted RBP10.92□□□□□ -0.66
RFC1-207ENST00000504554 LRRC4BQ9NT99 713 aa10.92□□□□□ -0.66
RFC1-207ENST00000504554 MTHFSP49914 203 aa10.91□□□□□ -0.66
RFC1-207ENST00000504554 NKX1-1Q15270 411 aaPredicted RBP10.91□□□□□ -0.66
RFC1-207ENST00000504554 PDGFDQ9GZP0 370 aaPredicted RBP10.91□□□□□ -0.66
RFC1-207ENST00000504554 HOXB3P14651 431 aaPredicted RBP10.9□□□□□ -0.66
RFC1-207ENST00000504554 KCNQ4P56696 695 aa10.9□□□□□ -0.66
RFC1-207ENST00000504554 SYTL4Q96C24 671 aaPredicted RBP10.9□□□□□ -0.66
RFC1-207ENST00000504554 RGPD3A6NKT7 1758 aaPredicted RBP10.9□□□□□ -0.67
RFC1-207ENST00000504554 RGPD4Q7Z3J3 1758 aa10.9□□□□□ -0.67
RFC1-207ENST00000504554 NPC1L1Q9UHC9 1359 aa10.9□□□□□ -0.67
RFC1-207ENST00000504554 PCDH11XQ9BZA7 1347 aa10.89□□□□□ -0.67
RFC1-207ENST00000504554 PCDH11YQ9BZA8 1340 aa10.89□□□□□ -0.67
RFC1-207ENST00000504554 PKD1L3Q7Z443 1732 aa10.89□□□□□ -0.67
RFC1-207ENST00000504554 DOT1LQ8TEK3 1739 aa10.89□□□□□ -0.67
RFC1-207ENST00000504554 BTAF1O14981 1849 aa10.88□□□□□ -0.67
RFC1-207ENST00000504554 POTEB3A0JP26 581 aa10.88□□□□□ -0.67
RFC1-207ENST00000504554 GTPBP6O43824 516 aaPredicted RBP10.88□□□□□ -0.67
RFC1-207ENST00000504554 PHKG2P15735 406 aa10.88□□□□□ -0.67
RFC1-207ENST00000504554 ZNF827Q17R98 1081 aa10.88□□□□□ -0.67
RFC1-207ENST00000504554 NBPF14Q5TI25 921 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms