RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 PCDHB11Q9Y5F2 797 aa9.14□□□□□ -0.95
COL4A5-207ENST00000504541 EMILIN1Q9Y6C2 1016 aa9.14□□□□□ -0.95
COL4A5-207ENST00000504541 PCF11O94913 1555 aaKnown RBP9.14□□□□□ -0.95
COL4A5-207ENST00000504541 ERVH48-1M5A8F1 160 aa9.13□□□□□ -0.95
COL4A5-207ENST00000504541 NR3C2P08235 984 aa9.13□□□□□ -0.95
COL4A5-207ENST00000504541 SMCPP49901 116 aaPredicted RBP9.13□□□□□ -0.95
COL4A5-207ENST00000504541 WDR4P57081 412 aaKnown RBP9.13□□□□□ -0.95
COL4A5-207ENST00000504541 CTC1Q2NKJ3 1217 aa9.13□□□□□ -0.95
COL4A5-207ENST00000504541 PPP1R26Q5T8A7 1209 aaPredicted RBP9.13□□□□□ -0.95
COL4A5-207ENST00000504541 KDM5BQ9UGL1 1544 aa9.12□□□□□ -0.95
COL4A5-207ENST00000504541 LORP23490 312 aaPredicted RBP9.12□□□□□ -0.95
COL4A5-207ENST00000504541 PPARGC1BQ86YN6 1023 aaKnown RBP9.12□□□□□ -0.95
COL4A5-207ENST00000504541 PHTF2Q8N3S3 785 aa9.12□□□□□ -0.95
COL4A5-207ENST00000504541 TMPRSS4Q9NRS4 437 aa9.12□□□□□ -0.95
COL4A5-207ENST00000504541 TFIP11Q9UBB9 837 aaKnown RBP9.12□□□□□ -0.95
COL4A5-207ENST00000504541 SERPINA10Q9UK55 444 aa9.12□□□□□ -0.95
COL4A5-207ENST00000504541 DOLKQ9UPQ8 538 aa9.12□□□□□ -0.95
COL4A5-207ENST00000504541 TROQ12816 1431 aaPredicted RBP9.12□□□□□ -0.95
COL4A5-207ENST00000504541 ABCC2Q92887 1545 aa9.11□□□□□ -0.95
COL4A5-207ENST00000504541 TTBK1Q5TCY1 1321 aaPredicted RBP9.11□□□□□ -0.95
COL4A5-207ENST00000504541 PIK3CDO00329 1044 aa9.11□□□□□ -0.95
COL4A5-207ENST00000504541 MAP7D1Q3KQU3 841 aa9.11□□□□□ -0.95
COL4A5-207ENST00000504541 TSGA10IPQ3SY00 556 aa9.11□□□□□ -0.95
COL4A5-207ENST00000504541 OXLD1Q5BKU9 147 aa9.11□□□□□ -0.95
COL4A5-207ENST00000504541 PLPP7Q8NBV4 271 aa9.11□□□□□ -0.95
COL4A5-207ENST00000504541 CCDC85AQ96PX6 553 aaPredicted RBP9.11□□□□□ -0.95
COL4A5-207ENST00000504541 ERCC6L2Q5T890 1561 aa9.11□□□□□ -0.95
COL4A5-207ENST00000504541 ZIC2O95409 532 aaPredicted RBP9.1□□□□□ -0.95
COL4A5-207ENST00000504541 MYCP01106 439 aaPredicted RBP9.1□□□□□ -0.95
COL4A5-207ENST00000504541 USP4Q13107 963 aa9.1□□□□□ -0.95
COL4A5-207ENST00000504541 TBC1D9Q6ZT07 1266 aa9.1□□□□□ -0.95
COL4A5-207ENST00000504541 NFATC2IPQ8NCF5 419 aa9.1□□□□□ -0.95
COL4A5-207ENST00000504541 PCGF6Q9BYE7 350 aa9.1□□□□□ -0.95
COL4A5-207ENST00000504541 PPP1R12CQ9BZL4 782 aa9.1□□□□□ -0.95
COL4A5-207ENST00000504541 MIA2Q96PC5 1412 aa9.1□□□□□ -0.95
COL4A5-207ENST00000504541 RRBP1Q9P2E9 1410 aaKnown RBP9.1□□□□□ -0.95
COL4A5-207ENST00000504541 EHBP1L1Q8N3D4 1523 aa9.1□□□□□ -0.95
COL4A5-207ENST00000504541 CAPN5O15484 640 aaPredicted RBP9.09□□□□□ -0.95
COL4A5-207ENST00000504541 ATP9BO43861 1147 aa9.09□□□□□ -0.95
COL4A5-207ENST00000504541 SNRPBP14678 240 aaKnown RBP9.09□□□□□ -0.95
COL4A5-207ENST00000504541 SIRT1Q96EB6 747 aa9.09□□□□□ -0.95
COL4A5-207ENST00000504541 ARID3AQ99856 593 aa9.09□□□□□ -0.95
COL4A5-207ENST00000504541 CYLDQ9NQC7 956 aa9.09□□□□□ -0.95
COL4A5-207ENST00000504541 CFAP43Q8NDM7 1665 aa9.08□□□□□ -0.96
COL4A5-207ENST00000504541 PALM3A6NDB9 673 aaPredicted RBP9.08□□□□□ -0.96
COL4A5-207ENST00000504541 RFX1P22670 979 aa9.08□□□□□ -0.96
COL4A5-207ENST00000504541 LMOD1P29536 600 aaPredicted RBP9.08□□□□□ -0.96
COL4A5-207ENST00000504541 DEPDC4Q8N2C3 294 aa9.08□□□□□ -0.96
COL4A5-207ENST00000504541 ITPKCQ96DU7 683 aa9.08□□□□□ -0.96
COL4A5-207ENST00000504541 CDCA7Q9BWT1 371 aaPredicted RBP9.08□□□□□ -0.96
COL4A5-207ENST00000504541 ARHGEF11O15085 1522 aa9.08□□□□□ -0.96
COL4A5-207ENST00000504541 CCNB3Q8WWL7 1395 aa9.08□□□□□ -0.96
COL4A5-207ENST00000504541 LZTS3O60299 673 aaPredicted RBP9.07□□□□□ -0.96
COL4A5-207ENST00000504541 EML3Q32P44 896 aa9.07□□□□□ -0.96
COL4A5-207ENST00000504541 CCDC82Q8N4S0 544 aa9.07□□□□□ -0.96
COL4A5-207ENST00000504541 ZNF784Q8NCA9 323 aaPredicted RBP9.07□□□□□ -0.96
COL4A5-207ENST00000504541 UCN2Q96RP3 112 aa9.07□□□□□ -0.96
COL4A5-207ENST00000504541 ZFAND3Q9H8U3 227 aa9.07□□□□□ -0.96
COL4A5-207ENST00000504541 PHLDB1Q86UU1 1377 aa9.07□□□□□ -0.96
COL4A5-207ENST00000504541 NCOA2Q15596 1464 aa9.07□□□□□ -0.96
COL4A5-207ENST00000504541 ACIN1Q9UKV3 1341 aaKnown RBP9.06□□□□□ -0.96
COL4A5-207ENST00000504541 USP17L5A8MUK1 530 aa9.06□□□□□ -0.96
COL4A5-207ENST00000504541 TIMP2P16035 220 aa9.06□□□□□ -0.96
COL4A5-207ENST00000504541 CC2D2BQ6DHV5 1058 aa9.06□□□□□ -0.96
COL4A5-207ENST00000504541 CYB5RLQ6IPT4 315 aa9.06□□□□□ -0.96
COL4A5-207ENST00000504541 C1orf115Q9H7X2 142 aa9.06□□□□□ -0.96
COL4A5-207ENST00000504541 MYOM3Q5VTT5 1437 aa9.05□□□□□ -0.96
COL4A5-207ENST00000504541 CDK13Q14004 1512 aaKnown RBP9.05□□□□□ -0.96
COL4A5-207ENST00000504541 ZSCAN1Q8NBB4 408 aa9.05□□□□□ -0.96
COL4A5-207ENST00000504541 ARXQ96QS3 562 aa9.05□□□□□ -0.96
COL4A5-207ENST00000504541 KLF16Q9BXK1 252 aaPredicted RBP9.05□□□□□ -0.96
COL4A5-207ENST00000504541 CHIC2Q9UKJ5 165 aa9.05□□□□□ -0.96
COL4A5-207ENST00000504541 NOD1Q9Y239 953 aa9.05□□□□□ -0.96
COL4A5-207ENST00000504541 UPP2O95045 317 aa9.04□□□□□ -0.96
COL4A5-207ENST00000504541 CBLBQ13191 982 aa9.04□□□□□ -0.96
COL4A5-207ENST00000504541 NCOA4Q13772 614 aa9.04□□□□□ -0.96
COL4A5-207ENST00000504541 CFDP1Q9UEE9 299 aaPredicted RBP9.04□□□□□ -0.96
COL4A5-207ENST00000504541 MAGI3Q5TCQ9 1506 aa9.04□□□□□ -0.96
COL4A5-207ENST00000504541 SUPT6HQ7KZ85 1726 aaKnown RBP9.03□□□□□ -0.96
COL4A5-207ENST00000504541 USP17L3A6NCW0 530 aa9.03□□□□□ -0.96
COL4A5-207ENST00000504541 USP17L4A6NCW7 530 aa9.03□□□□□ -0.96
COL4A5-207ENST00000504541 ERVK-9P63128 1117 aa9.03□□□□□ -0.96
COL4A5-207ENST00000504541 USP17L2Q6R6M4 530 aa9.03□□□□□ -0.96
COL4A5-207ENST00000504541 USP17L1Q7RTZ2 530 aa9.03□□□□□ -0.96
COL4A5-207ENST00000504541 TRIM47Q96LD4 638 aa9.03□□□□□ -0.96
COL4A5-207ENST00000504541 VRTNQ9H8Y1 702 aa9.03□□□□□ -0.96
COL4A5-207ENST00000504541 ATP13A2Q9NQ11 1180 aa9.03□□□□□ -0.96
COL4A5-207ENST00000504541 MKRN1Q9UHC7 482 aaKnown RBP9.03□□□□□ -0.96
COL4A5-207ENST00000504541 MAFBQ9Y5Q3 323 aaPredicted RBP9.03□□□□□ -0.96
COL4A5-207ENST00000504541 FGD6Q6ZV73 1430 aa9.03□□□□□ -0.96
COL4A5-207ENST00000504541 GPATCH8Q9UKJ3 1502 aaKnown RBP9.02□□□□□ -0.97
COL4A5-207ENST00000504541 LILRA1O75019 489 aa9.02□□□□□ -0.97
COL4A5-207ENST00000504541 ADD1P35611 737 aaKnown RBP9.02□□□□□ -0.97
COL4A5-207ENST00000504541 SCTRP47872 440 aa9.02□□□□□ -0.97
COL4A5-207ENST00000504541 CDCA8Q53HL2 280 aa9.02□□□□□ -0.97
COL4A5-207ENST00000504541 TRIM50Q86XT4 487 aa9.02□□□□□ -0.97
COL4A5-207ENST00000504541 TCOF1Q13428 1488 aaKnown RBP9.02□□□□□ -0.97
COL4A5-207ENST00000504541 ABCC10Q5T3U5 1492 aa9.02□□□□□ -0.97
COL4A5-207ENST00000504541 PSME1Q06323 249 aa9.01□□□□□ -0.97
COL4A5-207ENST00000504541 SCARF1Q14162 830 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms