RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 ERVH48-1M5A8F1 160 aa11.72□□□□□ -0.53
UBE2B-204ENST00000504431 MYCP01106 439 aaPredicted RBP11.72□□□□□ -0.53
UBE2B-204ENST00000504431 USP4Q13107 963 aa11.72□□□□□ -0.53
UBE2B-204ENST00000504431 NNTQ13423 1086 aa11.72□□□□□ -0.53
UBE2B-204ENST00000504431 TRAF7Q6Q0C0 670 aa11.72□□□□□ -0.53
UBE2B-204ENST00000504431 PBXIP1Q96AQ6 731 aa11.72□□□□□ -0.53
UBE2B-204ENST00000504431 PDZRN3Q9UPQ7 1066 aa11.72□□□□□ -0.53
UBE2B-204ENST00000504431 HECW1Q76N89 1606 aa11.71□□□□□ -0.53
UBE2B-204ENST00000504431 PLEKHD1A6NEE1 506 aa11.71□□□□□ -0.53
UBE2B-204ENST00000504431 NCOA4Q13772 614 aa11.71□□□□□ -0.53
UBE2B-204ENST00000504431 OXLD1Q5BKU9 147 aa11.71□□□□□ -0.53
UBE2B-204ENST00000504431 TRIM67Q6ZTA4 783 aa11.71□□□□□ -0.53
UBE2B-204ENST00000504431 CASKIN1Q8WXD9 1431 aa11.7□□□□□ -0.54
UBE2B-204ENST00000504431 RFX1P22670 979 aa11.7□□□□□ -0.54
UBE2B-204ENST00000504431 TRIM50Q86XT4 487 aa11.7□□□□□ -0.54
UBE2B-204ENST00000504431 NOD1Q9Y239 953 aa11.7□□□□□ -0.54
UBE2B-204ENST00000504431 ATP5J2-PTCD1G3V325 749 aa11.69□□□□□ -0.54
UBE2B-204ENST00000504431 PPP1R26Q5T8A7 1209 aaPredicted RBP11.69□□□□□ -0.54
UBE2B-204ENST00000504431 VRTNQ9H8Y1 702 aa11.69□□□□□ -0.54
UBE2B-204ENST00000504431 J3QL48 77 aa11.68□□□□□ -0.54
UBE2B-204ENST00000504431 NR3C2P08235 984 aa11.68□□□□□ -0.54
UBE2B-204ENST00000504431 ATP1A2P50993 1020 aa11.68□□□□□ -0.54
UBE2B-204ENST00000504431 MYT1Q01538 1121 aa11.68□□□□□ -0.54
UBE2B-204ENST00000504431 CC2D2BQ6DHV5 1058 aa11.68□□□□□ -0.54
UBE2B-204ENST00000504431 GLI2P10070 1586 aa11.67□□□□□ -0.54
UBE2B-204ENST00000504431 ACIN1Q9UKV3 1341 aaKnown RBP11.67□□□□□ -0.54
UBE2B-204ENST00000504431 SMPD1P17405 629 aa11.67□□□□□ -0.54
UBE2B-204ENST00000504431 DEPDC4Q8N2C3 294 aa11.67□□□□□ -0.54
UBE2B-204ENST00000504431 PPRC1Q5VV67 1664 aaKnown RBP11.67□□□□□ -0.54
UBE2B-204ENST00000504431 MAP3K4Q9Y6R4 1608 aa11.67□□□□□ -0.54
UBE2B-204ENST00000504431 ERVK-9P63128 1117 aa11.66□□□□□ -0.54
UBE2B-204ENST00000504431 MKRN1Q9UHC7 482 aaKnown RBP11.66□□□□□ -0.54
UBE2B-204ENST00000504431 MAGI3Q5TCQ9 1506 aa11.65□□□□□ -0.54
UBE2B-204ENST00000504431 LAPTM4AQ15012 233 aa11.65□□□□□ -0.54
UBE2B-204ENST00000504431 ZNF784Q8NCA9 323 aaPredicted RBP11.65□□□□□ -0.54
UBE2B-204ENST00000504431 CD109Q6YHK3 1445 aa11.65□□□□□ -0.54
UBE2B-204ENST00000504431 FYCO1Q9BQS8 1478 aa11.64□□□□□ -0.55
UBE2B-204ENST00000504431 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.64□□□□□ -0.55
UBE2B-204ENST00000504431 TSGA10IPQ3SY00 556 aa11.64□□□□□ -0.55
UBE2B-204ENST00000504431 LARP1Q6PKG0 1096 aaKnown RBP11.64□□□□□ -0.55
UBE2B-204ENST00000504431 CDCA7Q9BWT1 371 aaPredicted RBP11.64□□□□□ -0.55
UBE2B-204ENST00000504431 TMPRSS4Q9NRS4 437 aa11.64□□□□□ -0.55
UBE2B-204ENST00000504431 KIF14Q15058 1648 aa11.64□□□□□ -0.55
UBE2B-204ENST00000504431 NRG2O14511 850 aaPredicted RBP11.63□□□□□ -0.55
UBE2B-204ENST00000504431 WDR4P57081 412 aaKnown RBP11.63□□□□□ -0.55
UBE2B-204ENST00000504431 CYP2U1Q7Z449 544 aa11.63□□□□□ -0.55
UBE2B-204ENST00000504431 CYLDQ9NQC7 956 aa11.63□□□□□ -0.55
UBE2B-204ENST00000504431 CDK11AQ9UQ88 783 aaPredicted RBP11.63□□□□□ -0.55
UBE2B-204ENST00000504431 TTC37Q6PGP7 1564 aa11.62□□□□□ -0.55
UBE2B-204ENST00000504431 VPS8Q8N3P4 1428 aa11.62□□□□□ -0.55
UBE2B-204ENST00000504431 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.62□□□□□ -0.55
UBE2B-204ENST00000504431 FAM187AA6NFU0 413 aa11.62□□□□□ -0.55
UBE2B-204ENST00000504431 FAM196BA6NMK8 535 aa11.62□□□□□ -0.55
UBE2B-204ENST00000504431 KANK4Q5T7N3 995 aaPredicted RBP11.62□□□□□ -0.55
UBE2B-204ENST00000504431 CFAP43Q8NDM7 1665 aa11.62□□□□□ -0.55
UBE2B-204ENST00000504431 ABCA9Q8IUA7 1624 aa11.61□□□□□ -0.55
UBE2B-204ENST00000504431 ZIC2O95409 532 aaPredicted RBP11.61□□□□□ -0.55
UBE2B-204ENST00000504431 RASA1P20936 1047 aa11.61□□□□□ -0.55
UBE2B-204ENST00000504431 GTF2IP78347 998 aa11.61□□□□□ -0.55
UBE2B-204ENST00000504431 RBM19Q9Y4C8 960 aaKnown RBP11.61□□□□□ -0.55
UBE2B-204ENST00000504431 CCDC18Q5T9S5 1454 aa11.61□□□□□ -0.55
UBE2B-204ENST00000504431 TROQ12816 1431 aaPredicted RBP11.6□□□□□ -0.55
UBE2B-204ENST00000504431 COL17A1Q9UMD9 1497 aaPredicted RBP11.6□□□□□ -0.55
UBE2B-204ENST00000504431 GFRA3O60609 400 aa11.6□□□□□ -0.55
UBE2B-204ENST00000504431 ATG7O95352 703 aa11.6□□□□□ -0.55
UBE2B-204ENST00000504431 ARXQ96QS3 562 aa11.6□□□□□ -0.55
UBE2B-204ENST00000504431 DNAAF2Q9NVR5 837 aaKnown RBP11.6□□□□□ -0.55
UBE2B-204ENST00000504431 DGAT1O75907 488 aa11.59□□□□□ -0.55
UBE2B-204ENST00000504431 TIMP2P16035 220 aa11.59□□□□□ -0.55
UBE2B-204ENST00000504431 SCTRP47872 440 aa11.59□□□□□ -0.55
UBE2B-204ENST00000504431 SRPK2P78362 688 aaKnown RBP11.59□□□□□ -0.55
UBE2B-204ENST00000504431 PSME1Q06323 249 aa11.59□□□□□ -0.55
UBE2B-204ENST00000504431 PDE4CQ08493 712 aa11.59□□□□□ -0.55
UBE2B-204ENST00000504431 PKDCCQ504Y2 493 aa11.59□□□□□ -0.55
UBE2B-204ENST00000504431 LARGE2Q8N3Y3 721 aa11.59□□□□□ -0.55
UBE2B-204ENST00000504431 OGFOD1Q8N543 542 aa11.59□□□□□ -0.55
UBE2B-204ENST00000504431 HPS1Q92902 700 aa11.59□□□□□ -0.55
UBE2B-204ENST00000504431 KDM6BO15054 1643 aa11.58□□□□□ -0.56
UBE2B-204ENST00000504431 USP17L15C9J2P7 530 aa11.58□□□□□ -0.56
UBE2B-204ENST00000504431 USP17L10C9JJH3 530 aa11.58□□□□□ -0.56
UBE2B-204ENST00000504431 USP17L13C9JLJ4 530 aa11.58□□□□□ -0.56
UBE2B-204ENST00000504431 USP17L12C9JPN9 530 aa11.58□□□□□ -0.56
UBE2B-204ENST00000504431 USP17L11C9JVI0 530 aa11.58□□□□□ -0.56
UBE2B-204ENST00000504431 USP17L21D6R901 530 aa11.58□□□□□ -0.56
UBE2B-204ENST00000504431 USP17L18D6R9N7 530 aa11.58□□□□□ -0.56
UBE2B-204ENST00000504431 USP17L22D6RA61 530 aa11.58□□□□□ -0.56
UBE2B-204ENST00000504431 USP17L17D6RBQ6 530 aa11.58□□□□□ -0.56
UBE2B-204ENST00000504431 USP17L19D6RCP7 530 aa11.58□□□□□ -0.56
UBE2B-204ENST00000504431 USP17L20D6RJB6 530 aa11.58□□□□□ -0.56
UBE2B-204ENST00000504431 LILRA1O75019 489 aa11.58□□□□□ -0.56
UBE2B-204ENST00000504431 USP17L24Q0WX57 530 aa11.58□□□□□ -0.56
UBE2B-204ENST00000504431 ELOAQ14241 798 aaKnown RBP11.58□□□□□ -0.56
UBE2B-204ENST00000504431 PPARGC1BQ86YN6 1023 aaKnown RBP11.58□□□□□ -0.56
UBE2B-204ENST00000504431 ITPKCQ96DU7 683 aa11.58□□□□□ -0.56
UBE2B-204ENST00000504431 KLF16Q9BXK1 252 aaPredicted RBP11.58□□□□□ -0.56
UBE2B-204ENST00000504431 ADH1AP07327 375 aa11.57□□□□□ -0.56
UBE2B-204ENST00000504431 OSBPL3Q9H4L5 887 aa11.57□□□□□ -0.56
UBE2B-204ENST00000504431 MTUS2Q5JR59 1369 aa11.56□□□□□ -0.56
UBE2B-204ENST00000504431 AVPP01185 164 aa11.56□□□□□ -0.56
UBE2B-204ENST00000504431 CSB-PGBD3P0DP91 1061 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms