RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 FAM182BQ5T319 152 aa17.99■□□□□ 0.47
CYSTM1-202ENST00000504227 FAM196AQ6ZSG2 479 aa17.99■□□□□ 0.47
CYSTM1-202ENST00000504227 SYTL4Q96C24 671 aaPredicted RBP17.99■□□□□ 0.47
CYSTM1-202ENST00000504227 MIS18AQ9NYP9 233 aa17.99■□□□□ 0.47
CYSTM1-202ENST00000504227 TSPYL4Q9UJ04 414 aa17.99■□□□□ 0.47
CYSTM1-202ENST00000504227 SCN11AQ9UI33 1791 aa17.99■□□□□ 0.47
CYSTM1-202ENST00000504227 TRMT2AQ8IZ69 625 aaKnown RBP17.98■□□□□ 0.47
CYSTM1-202ENST00000504227 ACSBG1Q96GR2 724 aa17.98■□□□□ 0.47
CYSTM1-202ENST00000504227 MBIPQ9NS73 344 aa17.98■□□□□ 0.47
CYSTM1-202ENST00000504227 ADAMTS7Q9UKP4 1686 aa17.98■□□□□ 0.47
CYSTM1-202ENST00000504227 RGS12O14924 1447 aa17.98■□□□□ 0.47
CYSTM1-202ENST00000504227 BCL9O00512 1426 aa17.97■□□□□ 0.47
CYSTM1-202ENST00000504227 DUSP27Q5VZP5 1158 aa17.96■□□□□ 0.47
CYSTM1-202ENST00000504227 PIGBQ92521 554 aa17.96■□□□□ 0.47
CYSTM1-202ENST00000504227 TSR2Q969E8 191 aaKnown RBP17.96■□□□□ 0.47
CYSTM1-202ENST00000504227 FANCIQ9NVI1 1328 aa17.96■□□□□ 0.46
CYSTM1-202ENST00000504227 MRC1P22897 1456 aa17.95■□□□□ 0.46
CYSTM1-202ENST00000504227 BRWD3Q6RI45 1802 aa17.94■□□□□ 0.46
CYSTM1-202ENST00000504227 TTC5Q8N0Z6 440 aa17.94■□□□□ 0.46
CYSTM1-202ENST00000504227 KCNQ2O43526 872 aa17.93■□□□□ 0.46
CYSTM1-202ENST00000504227 CENPBP07199 599 aaPredicted RBP17.93■□□□□ 0.46
CYSTM1-202ENST00000504227 SLC39A6Q13433 755 aa17.93■□□□□ 0.46
CYSTM1-202ENST00000504227 ZNF790Q6PG37 636 aa17.93■□□□□ 0.46
CYSTM1-202ENST00000504227 VIRMAQ69YN4 1812 aaKnown RBP17.93■□□□□ 0.46
CYSTM1-202ENST00000504227 EXOSC9Q06265 439 aaKnown RBP17.92■□□□□ 0.46
CYSTM1-202ENST00000504227 KCNQ3O43525 872 aa17.91■□□□□ 0.46
CYSTM1-202ENST00000504227 ATG3Q9NT62 314 aa17.91■□□□□ 0.46
CYSTM1-202ENST00000504227 TOGARAM1Q9Y4F4 1720 aa17.91■□□□□ 0.46
CYSTM1-202ENST00000504227 EIF4A1P60842 406 aaKnown RBP17.9■□□□□ 0.46
CYSTM1-202ENST00000504227 SMARCC1Q92922 1105 aaPredicted RBP17.9■□□□□ 0.46
CYSTM1-202ENST00000504227 BCL11BQ9C0K0 894 aaPredicted RBP17.9■□□□□ 0.46
CYSTM1-202ENST00000504227 ASAP1Q9ULH1 1129 aa17.9■□□□□ 0.46
CYSTM1-202ENST00000504227 DOT1LQ8TEK3 1739 aa17.89■□□□□ 0.46
CYSTM1-202ENST00000504227 ITGB4P16144 1822 aa17.89■□□□□ 0.45
CYSTM1-202ENST00000504227 FMNL2Q96PY5 1086 aa17.89■□□□□ 0.45
CYSTM1-202ENST00000504227 SIPA1L3O60292 1781 aaPredicted RBP17.89■□□□□ 0.45
CYSTM1-202ENST00000504227 TRIM37O94972 964 aa17.88■□□□□ 0.45
CYSTM1-202ENST00000504227 CT47B1P0C2W7 299 aaPredicted RBP17.88■□□□□ 0.45
CYSTM1-202ENST00000504227 C8orf58Q8NAV2 365 aa17.88■□□□□ 0.45
CYSTM1-202ENST00000504227 ELL2O00472 640 aaPredicted RBP17.87■□□□□ 0.45
CYSTM1-202ENST00000504227 PTCD1O75127 700 aaKnown RBP17.87■□□□□ 0.45
CYSTM1-202ENST00000504227 TWISTNBQ3B726 338 aaPredicted RBP17.87■□□□□ 0.45
CYSTM1-202ENST00000504227 PTF1AQ7RTS3 328 aa17.87■□□□□ 0.45
CYSTM1-202ENST00000504227 ZNF496Q96IT1 587 aaPredicted RBP17.87■□□□□ 0.45
CYSTM1-202ENST00000504227 KRT24Q2M2I5 525 aa17.86■□□□□ 0.45
CYSTM1-202ENST00000504227 RBM42Q9BTD8 480 aaKnown RBP17.86■□□□□ 0.45
CYSTM1-202ENST00000504227 CHMP4AQ9BY43 222 aa17.86■□□□□ 0.45
CYSTM1-202ENST00000504227 SOS1Q07889 1333 aaPredicted RBP17.86■□□□□ 0.45
CYSTM1-202ENST00000504227 SNRPA1P09661 255 aaKnown RBP17.85■□□□□ 0.45
CYSTM1-202ENST00000504227 TSPYL6Q8N831 410 aa17.85■□□□□ 0.45
CYSTM1-202ENST00000504227 KDM3BQ7LBC6 1761 aa17.84■□□□□ 0.45
CYSTM1-202ENST00000504227 HEG1Q9ULI3 1381 aa17.84■□□□□ 0.45
CYSTM1-202ENST00000504227 VAMP4O75379 141 aa17.84■□□□□ 0.45
CYSTM1-202ENST00000504227 GIGYF1O75420 1035 aaPredicted RBP17.84■□□□□ 0.45
CYSTM1-202ENST00000504227 HOXB7P09629 217 aa17.84■□□□□ 0.45
CYSTM1-202ENST00000504227 NHSQ6T4R5 1651 aa17.83■□□□□ 0.45
CYSTM1-202ENST00000504227 PALLDQ8WX93 1383 aa17.83■□□□□ 0.45
CYSTM1-202ENST00000504227 VSIG10Q8N0Z9 540 aa17.83■□□□□ 0.44
CYSTM1-202ENST00000504227 ZNF428Q96B54 188 aa17.83■□□□□ 0.44
CYSTM1-202ENST00000504227 TEX13AQ9BXU3 409 aaPredicted RBP17.83■□□□□ 0.44
CYSTM1-202ENST00000504227 SBF2Q86WG5 1849 aa17.83■□□□□ 0.44
CYSTM1-202ENST00000504227 RCAN3Q9UKA8 241 aa17.82■□□□□ 0.44
CYSTM1-202ENST00000504227 LOC102724428A0A0B4J2F2 783 aa17.81■□□□□ 0.44
CYSTM1-202ENST00000504227 APBA3O96018 575 aa17.81■□□□□ 0.44
CYSTM1-202ENST00000504227 SIK1P57059 783 aa17.81■□□□□ 0.44
CYSTM1-202ENST00000504227 EIF2S2P20042 333 aaKnown RBP17.8■□□□□ 0.44
CYSTM1-202ENST00000504227 HDGFL1Q5TGJ6 251 aa17.8■□□□□ 0.44
CYSTM1-202ENST00000504227 CCDC30Q5VVM6 783 aa17.8■□□□□ 0.44
CYSTM1-202ENST00000504227 KCPQ6ZWJ8 1503 aa17.8■□□□□ 0.44
CYSTM1-202ENST00000504227 PAPPAQ13219 1627 aa17.8■□□□□ 0.44
CYSTM1-202ENST00000504227 ATP6V1AP38606 617 aa17.79■□□□□ 0.44
CYSTM1-202ENST00000504227 BTAF1O14981 1849 aa17.79■□□□□ 0.44
CYSTM1-202ENST00000504227 PRAMEF22A3QJZ6 481 aa17.78■□□□□ 0.44
CYSTM1-202ENST00000504227 STARD3NLO95772 234 aa17.78■□□□□ 0.44
CYSTM1-202ENST00000504227 RARSP54136 660 aaKnown RBP17.78■□□□□ 0.44
CYSTM1-202ENST00000504227 SF3B2Q13435 895 aaKnown RBP17.78■□□□□ 0.44
CYSTM1-202ENST00000504227 ALDH1L2Q3SY69 923 aa17.78■□□□□ 0.44
CYSTM1-202ENST00000504227 DNAJC10Q8IXB1 793 aa17.78■□□□□ 0.44
CYSTM1-202ENST00000504227 NECTIN2Q92692 538 aa17.78■□□□□ 0.44
CYSTM1-202ENST00000504227 SLC4A9Q96Q91 983 aa17.78■□□□□ 0.44
CYSTM1-202ENST00000504227 STK31Q9BXU1 1019 aa17.78■□□□□ 0.44
CYSTM1-202ENST00000504227 USP16Q9Y5T5 823 aa17.78■□□□□ 0.44
CYSTM1-202ENST00000504227 SSH1Q8WYL5 1049 aa17.77■□□□□ 0.44
CYSTM1-202ENST00000504227 SMC4Q9NTJ3 1288 aa17.77■□□□□ 0.44
CYSTM1-202ENST00000504227 CCNL1Q9UK58 526 aaPredicted RBP17.77■□□□□ 0.44
CYSTM1-202ENST00000504227 UBR2Q8IWV8 1755 aa17.76■□□□□ 0.43
CYSTM1-202ENST00000504227 PLSCR1O15162 318 aa17.76■□□□□ 0.43
CYSTM1-202ENST00000504227 TCERG1O14776 1098 aaKnown RBP17.75■□□□□ 0.43
CYSTM1-202ENST00000504227 HMGB2P26583 209 aaKnown RBP17.75■□□□□ 0.43
CYSTM1-202ENST00000504227 SLC27A3Q5K4L6 730 aa17.75■□□□□ 0.43
CYSTM1-202ENST00000504227 CCDC125Q86Z20 511 aa17.75■□□□□ 0.43
CYSTM1-202ENST00000504227 DBF4Q9UBU7 674 aaPredicted RBP17.75■□□□□ 0.43
CYSTM1-202ENST00000504227 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
CYSTM1-202ENST00000504227 CYP19A1P11511 503 aaPredicted RBP17.74■□□□□ 0.43
CYSTM1-202ENST00000504227 ITPK1Q13572 414 aa17.74■□□□□ 0.43
CYSTM1-202ENST00000504227 BCL2L13Q9BXK5 485 aa17.74■□□□□ 0.43
CYSTM1-202ENST00000504227 BCAR3O75815 825 aa17.73■□□□□ 0.43
CYSTM1-202ENST00000504227 ERBB4Q15303 1308 aa17.72■□□□□ 0.43
CYSTM1-202ENST00000504227 KCNQ4P56696 695 aa17.72■□□□□ 0.43
CYSTM1-202ENST00000504227 TXNRD1Q16881 649 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms