RNA–Protein interactions for RNA: ENST00000504208.5

KLHL3-204, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-204ENST00000504208 SLIT2O94813 1529 aa12.06□□□□□ -0.48
KLHL3-204ENST00000504208 DCTN1Q14203 1278 aa12.05□□□□□ -0.48
KLHL3-204ENST00000504208 C8orf34Q49A92 452 aa12.05□□□□□ -0.48
KLHL3-204ENST00000504208 INTS3Q68E01 1043 aaKnown RBP12.05□□□□□ -0.48
KLHL3-204ENST00000504208 MCM10Q7L590 875 aa12.05□□□□□ -0.48
KLHL3-204ENST00000504208 MAP3K5Q99683 1374 aa12.04□□□□□ -0.48
KLHL3-204ENST00000504208 RGS3P49796 1198 aa12.04□□□□□ -0.48
KLHL3-204ENST00000504208 AMOTQ4VCS5 1084 aa12.04□□□□□ -0.48
KLHL3-204ENST00000504208 ERICH6Q7L0X2 663 aa12.04□□□□□ -0.48
KLHL3-204ENST00000504208 GCC1Q96CN9 775 aa12.04□□□□□ -0.48
KLHL3-204ENST00000504208 PDZRN3Q9UPQ7 1066 aa12.04□□□□□ -0.48
KLHL3-204ENST00000504208 NOP58Q9Y2X3 529 aaKnown RBP12.04□□□□□ -0.48
KLHL3-204ENST00000504208 CSB-PGBD3P0DP91 1061 aa12.03□□□□□ -0.48
KLHL3-204ENST00000504208 BTG4Q9NY30 223 aa12.03□□□□□ -0.48
KLHL3-204ENST00000504208 ZBTB47Q9UFB7 747 aaPredicted RBP12.03□□□□□ -0.48
KLHL3-204ENST00000504208 TSPYL4Q9UJ04 414 aa12.03□□□□□ -0.48
KLHL3-204ENST00000504208 WDR17Q8IZU2 1322 aa12.03□□□□□ -0.48
KLHL3-204ENST00000504208 LRRC37A3O60309 1634 aa12.02□□□□□ -0.48
KLHL3-204ENST00000504208 TAF7Q15545 349 aaPredicted RBP12.02□□□□□ -0.49
KLHL3-204ENST00000504208 USHBP1Q8N6Y0 703 aa12.02□□□□□ -0.49
KLHL3-204ENST00000504208 CEMIPQ8WUJ3 1361 aa12.02□□□□□ -0.49
KLHL3-204ENST00000504208 MEGF6O75095 1541 aa12.01□□□□□ -0.49
KLHL3-204ENST00000504208 ELL2O00472 640 aaPredicted RBP12.01□□□□□ -0.49
KLHL3-204ENST00000504208 HOXB7P09629 217 aa12.01□□□□□ -0.49
KLHL3-204ENST00000504208 MEX3CQ5U5Q3 659 aaKnown RBP12.01□□□□□ -0.49
KLHL3-204ENST00000504208 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
KLHL3-204ENST00000504208 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
KLHL3-204ENST00000504208 C8orf37Q96NL8 207 aa12.01□□□□□ -0.49
KLHL3-204ENST00000504208 STRN4Q9NRL3 753 aa12.01□□□□□ -0.49
KLHL3-204ENST00000504208 OVOS2A0A0G2JMS6 1433 aa12.01□□□□□ -0.49
KLHL3-204ENST00000504208 PLEKHO1Q53GL0 409 aaPredicted RBP12.01□□□□□ -0.49
KLHL3-204ENST00000504208 NLRP2Q9NX02 1062 aa12.01□□□□□ -0.49
KLHL3-204ENST00000504208 BCL9LQ86UU0 1499 aa12□□□□□ -0.49
KLHL3-204ENST00000504208 NUCB1Q02818 461 aa12□□□□□ -0.49
KLHL3-204ENST00000504208 AKAP4Q5JQC9 854 aa12□□□□□ -0.49
KLHL3-204ENST00000504208 CCDC30Q5VVM6 783 aa12□□□□□ -0.49
KLHL3-204ENST00000504208 RPAP2Q8IXW5 612 aaPredicted RBP12□□□□□ -0.49
KLHL3-204ENST00000504208 IL17REQ8NFR9 667 aa12□□□□□ -0.49
KLHL3-204ENST00000504208 SCN11AQ9UI33 1791 aa12□□□□□ -0.49
KLHL3-204ENST00000504208 GLI3P10071 1580 aa11.99□□□□□ -0.49
KLHL3-204ENST00000504208 EIF5BO60841 1220 aaKnown RBP11.99□□□□□ -0.49
KLHL3-204ENST00000504208 EVA1CP58658 441 aa11.99□□□□□ -0.49
KLHL3-204ENST00000504208 LARP1Q6PKG0 1096 aaKnown RBP11.99□□□□□ -0.49
KLHL3-204ENST00000504208 TOM1L2Q6ZVM7 507 aa11.99□□□□□ -0.49
KLHL3-204ENST00000504208 SKAP1Q86WV1 359 aa11.99□□□□□ -0.49
KLHL3-204ENST00000504208 STK31Q9BXU1 1019 aa11.99□□□□□ -0.49
KLHL3-204ENST00000504208 THSD7AQ9UPZ6 1657 aa11.99□□□□□ -0.49
KLHL3-204ENST00000504208 SOCS7O14512 581 aa11.98□□□□□ -0.49
KLHL3-204ENST00000504208 CCT4P50991 539 aaKnown RBP11.98□□□□□ -0.49
KLHL3-204ENST00000504208 NGLY1Q96IV0 654 aa11.98□□□□□ -0.49
KLHL3-204ENST00000504208 RGS17Q9UGC6 210 aaPredicted RBP11.98□□□□□ -0.49
KLHL3-204ENST00000504208 RGS12O14924 1447 aa11.97□□□□□ -0.49
KLHL3-204ENST00000504208 SLC4A2P04920 1241 aa11.97□□□□□ -0.49
KLHL3-204ENST00000504208 AFF2P51816 1311 aa11.97□□□□□ -0.49
KLHL3-204ENST00000504208 ADAMTS7Q9UKP4 1686 aa11.97□□□□□ -0.49
KLHL3-204ENST00000504208 SIPA1L3O60292 1781 aaPredicted RBP11.97□□□□□ -0.49
KLHL3-204ENST00000504208 DISP2A7MBM2 1401 aa11.97□□□□□ -0.49
KLHL3-204ENST00000504208 CHD1LQ86WJ1 897 aa11.96□□□□□ -0.49
KLHL3-204ENST00000504208 UPF2Q9HAU5 1272 aaKnown RBP11.96□□□□□ -0.49
KLHL3-204ENST00000504208 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.96□□□□□ -0.49
KLHL3-204ENST00000504208 TOGARAM1Q9Y4F4 1720 aa11.96□□□□□ -0.49
KLHL3-204ENST00000504208 UNC5CLQ8IV45 518 aa11.96□□□□□ -0.5
KLHL3-204ENST00000504208 FNBP4Q8N3X1 1017 aaPredicted RBP11.96□□□□□ -0.5
KLHL3-204ENST00000504208 CARD10Q9BWT7 1032 aa11.96□□□□□ -0.5
KLHL3-204ENST00000504208 DOT1LQ8TEK3 1739 aa11.95□□□□□ -0.5
KLHL3-204ENST00000504208 ATRNO75882 1429 aa11.95□□□□□ -0.5
KLHL3-204ENST00000504208 BRWD3Q6RI45 1802 aa11.95□□□□□ -0.5
KLHL3-204ENST00000504208 ANKRD44Q8N8A2 993 aa11.95□□□□□ -0.5
KLHL3-204ENST00000504208 USP35Q9P2H5 1018 aa11.95□□□□□ -0.5
KLHL3-204ENST00000504208 USP21Q9UK80 565 aa11.95□□□□□ -0.5
KLHL3-204ENST00000504208 SPATA31A1Q5TZJ5 1347 aa11.94□□□□□ -0.5
KLHL3-204ENST00000504208 KRT24Q2M2I5 525 aa11.94□□□□□ -0.5
KLHL3-204ENST00000504208 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
KLHL3-204ENST00000504208 RAPGEF4Q8WZA2 1011 aa11.94□□□□□ -0.5
KLHL3-204ENST00000504208 DCTPP1Q9H773 170 aa11.94□□□□□ -0.5
KLHL3-204ENST00000504208 TNS2Q63HR2 1409 aa11.94□□□□□ -0.5
KLHL3-204ENST00000504208 SPATA31A5Q5VU36 1347 aa11.93□□□□□ -0.5
KLHL3-204ENST00000504208 SPATA31A7Q8IWB4 1347 aa11.93□□□□□ -0.5
KLHL3-204ENST00000504208 ITGB4P16144 1822 aa11.93□□□□□ -0.5
KLHL3-204ENST00000504208 C1orf141Q5JVX7 400 aa11.93□□□□□ -0.5
KLHL3-204ENST00000504208 ZNF530Q6P9A1 599 aaPredicted RBP11.93□□□□□ -0.5
KLHL3-204ENST00000504208 MIS18AQ9NYP9 233 aa11.93□□□□□ -0.5
KLHL3-204ENST00000504208 CCDC9Q9Y3X0 531 aaKnown RBP11.93□□□□□ -0.5
KLHL3-204ENST00000504208 PXDNLA1KZ92 1463 aa11.93□□□□□ -0.5
KLHL3-204ENST00000504208 HMMRO75330 724 aa11.92□□□□□ -0.5
KLHL3-204ENST00000504208 GNAI3P08754 354 aa11.92□□□□□ -0.5
KLHL3-204ENST00000504208 TATP17735 454 aaPredicted RBP11.92□□□□□ -0.5
KLHL3-204ENST00000504208 TEFQ10587 303 aa11.92□□□□□ -0.5
KLHL3-204ENST00000504208 BMP2KLQ5H9B9 411 aa11.92□□□□□ -0.5
KLHL3-204ENST00000504208 SIRT2Q8IXJ6 389 aa11.92□□□□□ -0.5
KLHL3-204ENST00000504208 KDM3BQ7LBC6 1761 aa11.92□□□□□ -0.5
KLHL3-204ENST00000504208 IL2RBP14784 551 aa11.92□□□□□ -0.5
KLHL3-204ENST00000504208 EIF4A1P60842 406 aaKnown RBP11.92□□□□□ -0.5
KLHL3-204ENST00000504208 FLIIQ13045 1269 aa11.92□□□□□ -0.5
KLHL3-204ENST00000504208 VPS72Q15906 364 aa11.92□□□□□ -0.5
KLHL3-204ENST00000504208 RNMTO43148 476 aaKnown RBP11.91□□□□□ -0.5
KLHL3-204ENST00000504208 POTEAQ6S8J7 498 aa11.91□□□□□ -0.5
KLHL3-204ENST00000504208 DAXXQ9UER7 740 aaPredicted RBP11.91□□□□□ -0.5
KLHL3-204ENST00000504208 ATP10DQ9P241 1426 aa11.9□□□□□ -0.5
KLHL3-204ENST00000504208 ANKRD45Q5TZF3 282 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms