RNA–Protein interactions for RNA: ENST00000504091.1

SH3TC2-204, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 4,522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-204ENST00000504091 GOLGA6L19H0YKK7 550 aa8.28□□□□□ -1.08
SH3TC2-204ENST00000504091 CLEC17AQ6ZS10 378 aa8.28□□□□□ -1.08
SH3TC2-204ENST00000504091 SMTNL1A8MU46 457 aa8.28□□□□□ -1.08
SH3TC2-204ENST00000504091 GTF2A1P52655 376 aaPredicted RBP8.28□□□□□ -1.08
SH3TC2-204ENST00000504091 TPM4P67936 248 aa8.28□□□□□ -1.08
SH3TC2-204ENST00000504091 ELL2O00472 640 aaPredicted RBP8.28□□□□□ -1.08
SH3TC2-204ENST00000504091 MTHFSP49914 203 aa8.28□□□□□ -1.08
SH3TC2-204ENST00000504091 HNRNPMP52272 730 aaKnown RBP eCLIP8.28□□□□□ -1.08
SH3TC2-204ENST00000504091 ZNF397Q8NF99 534 aaPredicted RBP8.28□□□□□ -1.08
SH3TC2-204ENST00000504091 PZPP20742 1482 aa8.28□□□□□ -1.08
SH3TC2-204ENST00000504091 SMARCA5O60264 1052 aaPredicted RBP8.28□□□□□ -1.08
SH3TC2-204ENST00000504091 CCDC27Q2M243 656 aa8.28□□□□□ -1.08
SH3TC2-204ENST00000504091 CHAMP1Q96JM3 812 aa8.28□□□□□ -1.08
SH3TC2-204ENST00000504091 ABCC3O15438 1527 aa8.27□□□□□ -1.08
SH3TC2-204ENST00000504091 BMS1Q14692 1282 aaKnown RBP8.27□□□□□ -1.09
SH3TC2-204ENST00000504091 ANO2Q9NQ90 1003 aa8.27□□□□□ -1.09
SH3TC2-204ENST00000504091 DNMT1P26358 1616 aaKnown RBP8.27□□□□□ -1.09
SH3TC2-204ENST00000504091 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.27□□□□□ -1.09
SH3TC2-204ENST00000504091 V9GYY5 206 aaPredicted RBP8.27□□□□□ -1.09
SH3TC2-204ENST00000504091 RTEL1-TNFRSF6BF6WH68 1400 aa8.27□□□□□ -1.09
SH3TC2-204ENST00000504091 ERC2O15083 957 aa8.27□□□□□ -1.09
SH3TC2-204ENST00000504091 POLR3GO15318 223 aaPredicted RBP8.27□□□□□ -1.09
SH3TC2-204ENST00000504091 TERF2Q15554 542 aa8.27□□□□□ -1.09
SH3TC2-204ENST00000504091 PTPN14Q15678 1187 aa8.27□□□□□ -1.09
SH3TC2-204ENST00000504091 MLECQ14165 292 aa8.26□□□□□ -1.09
SH3TC2-204ENST00000504091 STK24Q9Y6E0 443 aa8.26□□□□□ -1.09
SH3TC2-204ENST00000504091 TROQ12816 1431 aaPredicted RBP8.26□□□□□ -1.09
SH3TC2-204ENST00000504091 USP48Q86UV5 1035 aa8.26□□□□□ -1.09
SH3TC2-204ENST00000504091 RASSF4Q9H2L5 321 aa8.26□□□□□ -1.09
SH3TC2-204ENST00000504091 PIK3C2GO75747 1445 aa8.26□□□□□ -1.09
SH3TC2-204ENST00000504091 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.26□□□□□ -1.09
SH3TC2-204ENST00000504091 NCOA3Q9Y6Q9 1424 aa8.26□□□□□ -1.09
SH3TC2-204ENST00000504091 BECN2A8MW95 431 aa8.26□□□□□ -1.09
SH3TC2-204ENST00000504091 CEP135Q66GS9 1140 aa8.26□□□□□ -1.09
SH3TC2-204ENST00000504091 CCDC186Q7Z3E2 898 aa8.26□□□□□ -1.09
SH3TC2-204ENST00000504091 TMX3Q96JJ7 454 aa8.26□□□□□ -1.09
SH3TC2-204ENST00000504091 MX1P20591 662 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 PTGS1P23219 599 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 SRPK2P78362 688 aaKnown RBP8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 GIMAP6Q6P9H5 292 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 HOMER1Q86YM7 354 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 MNS1Q8NEH6 495 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 RILPL2Q969X0 211 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 AK7Q96M32 723 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 DEF6Q9H4E7 631 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 ZBTB40Q9NUA8 1239 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 NSFL1CQ9UNZ2 370 aaKnown RBP8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 SMC3Q9UQE7 1217 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 SAMD9LQ8IVG5 1584 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 ALKQ9UM73 1620 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 GNL2Q13823 731 aaKnown RBP8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 RNF20Q5VTR2 975 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 GPATCH11Q8N954 259 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 KIF18AQ8NI77 898 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 KIAA1524Q8TCG1 905 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 RSPH14Q9UHP6 348 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 ATP7AQ04656 1500 aa8.25□□□□□ -1.09
SH3TC2-204ENST00000504091 IQGAP1P46940 1657 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 MBD5Q9P267 1494 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 TOM1O60784 492 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 CREBRFQ8IUR6 639 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 C10orf67Q8IYJ2 551 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 DDX41Q9UJV9 622 aaKnown RBP8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 PYCARDQ9ULZ3 195 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 VPS37CA5D8V6 355 aaPredicted RBP8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 HMMRO75330 724 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 GORABQ5T7V8 394 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 RBM26Q5T8P6 1007 aaKnown RBP8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 ZRANB1Q9UGI0 708 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 NWD1Q149M9 1564 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 TMCO3Q6UWJ1 677 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 TXLNBQ8N3L3 684 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 TMX1Q9H3N1 280 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 PRAG1Q86YV5 1406 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 NUTM2BA6NNL0 878 aaPredicted RBP8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 NUTM2EB1AL46 878 aaPredicted RBP8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 NCBP1Q09161 790 aaKnown RBP8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 NUTM2DQ5VT03 806 aaPredicted RBP8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 LEKR1Q6ZMV7 388 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 NUTM2AQ8IVF1 878 aaPredicted RBP8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 USP26Q9BXU7 913 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 SPTLC3Q9NUV7 552 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 CTNNA3Q9UI47 895 aa8.24□□□□□ -1.09
SH3TC2-204ENST00000504091 CTR9Q6PD62 1173 aa8.23□□□□□ -1.09
SH3TC2-204ENST00000504091 ANKRD7Q92527 254 aa8.23□□□□□ -1.09
SH3TC2-204ENST00000504091 SHANK2Q9UPX8 1470 aa8.23□□□□□ -1.09
SH3TC2-204ENST00000504091 CDC42BPAQ5VT25 1732 aa8.23□□□□□ -1.09
SH3TC2-204ENST00000504091 UBE2HP62256 183 aa8.23□□□□□ -1.09
SH3TC2-204ENST00000504091 GTF3C6Q969F1 213 aa8.23□□□□□ -1.09
SH3TC2-204ENST00000504091 KIF2CQ99661 725 aa8.23□□□□□ -1.09
SH3TC2-204ENST00000504091 GADD45BO75293 160 aaPredicted RBP8.23□□□□□ -1.09
SH3TC2-204ENST00000504091 RSPH4AQ5TD94 716 aa8.23□□□□□ -1.09
SH3TC2-204ENST00000504091 API5Q9BZZ5 524 aaKnown RBP8.23□□□□□ -1.09
SH3TC2-204ENST00000504091 MAST1Q9Y2H9 1570 aa8.23□□□□□ -1.09
SH3TC2-204ENST00000504091 CLTCQ00610 1675 aaKnown RBP8.23□□□□□ -1.09
SH3TC2-204ENST00000504091 ZBTB9Q96C00 473 aa8.22□□□□□ -1.09
SH3TC2-204ENST00000504091 TOMM22Q9NS69 142 aa8.22□□□□□ -1.09
SH3TC2-204ENST00000504091 ASXL1Q8IXJ9 1541 aa8.22□□□□□ -1.09
SH3TC2-204ENST00000504091 SLFN14P0C7P3 912 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms