RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 KRTAP4-6Q9BYQ5 205 aa5.55□□□□□ -1.52
USP46-205ENST00000504078 PHRF1Q9P1Y6 1649 aaKnown RBP5.55□□□□□ -1.52
USP46-205ENST00000504078 COL14A1Q05707 1796 aaKnown RBP5.55□□□□□ -1.52
USP46-205ENST00000504078 ADGRF5Q8IZF2 1346 aa5.54□□□□□ -1.52
USP46-205ENST00000504078 MYOM1P52179 1685 aa5.54□□□□□ -1.52
USP46-205ENST00000504078 ALS2Q96Q42 1657 aa5.54□□□□□ -1.52
USP46-205ENST00000504078 NRXN1Q9ULB1 1477 aa5.54□□□□□ -1.52
USP46-205ENST00000504078 FAM187AA6NFU0 413 aa5.54□□□□□ -1.52
USP46-205ENST00000504078 NBPF26B4DH59 902 aa5.54□□□□□ -1.52
USP46-205ENST00000504078 ZPR1O75312 459 aa5.54□□□□□ -1.52
USP46-205ENST00000504078 PRSS12P56730 875 aa5.54□□□□□ -1.52
USP46-205ENST00000504078 TMEM132EQ6IEE7 984 aa5.54□□□□□ -1.52
USP46-205ENST00000504078 KRT28Q7Z3Y7 464 aa5.54□□□□□ -1.52
USP46-205ENST00000504078 TATDN2Q93075 761 aa5.54□□□□□ -1.52
USP46-205ENST00000504078 LRPPRCP42704 1394 aaKnown RBP5.54□□□□□ -1.52
USP46-205ENST00000504078 SMAPO00193 183 aa5.53□□□□□ -1.52
USP46-205ENST00000504078 TRIM37O94972 964 aa5.53□□□□□ -1.52
USP46-205ENST00000504078 PMFBP1Q8TBY8 1022 aa5.53□□□□□ -1.52
USP46-205ENST00000504078 AAASQ9NRG9 546 aa5.53□□□□□ -1.52
USP46-205ENST00000504078 BTG4Q9NY30 223 aa5.53□□□□□ -1.52
USP46-205ENST00000504078 TECPR2O15040 1411 aa5.53□□□□□ -1.52
USP46-205ENST00000504078 DISP2A7MBM2 1401 aa5.52□□□□□ -1.53
USP46-205ENST00000504078 YTHDC2Q9H6S0 1430 aaKnown RBP5.52□□□□□ -1.53
USP46-205ENST00000504078 RNF223E7ERA6 249 aa5.52□□□□□ -1.53
USP46-205ENST00000504078 MAP3K7O43318 606 aa5.52□□□□□ -1.53
USP46-205ENST00000504078 GDF9O60383 454 aa5.52□□□□□ -1.53
USP46-205ENST00000504078 COPS2P61201 443 aa5.52□□□□□ -1.53
USP46-205ENST00000504078 CAMK2BQ13554 666 aa5.52□□□□□ -1.53
USP46-205ENST00000504078 RGL3Q3MIN7 710 aa5.52□□□□□ -1.53
USP46-205ENST00000504078 ANKLE1Q8NAG6 615 aa5.52□□□□□ -1.53
USP46-205ENST00000504078 EMID1Q96A84 441 aaPredicted RBP5.52□□□□□ -1.53
USP46-205ENST00000504078 PPP1R1BQ9UD71 204 aaPredicted RBP5.52□□□□□ -1.53
USP46-205ENST00000504078 PNMA3Q9UL41 463 aa5.52□□□□□ -1.53
USP46-205ENST00000504078 PIK3C2GO75747 1445 aa5.51□□□□□ -1.53
USP46-205ENST00000504078 SENP3-EIF4A1A0A087X0R7 540 aa5.51□□□□□ -1.53
USP46-205ENST00000504078 FAM83GA6ND36 823 aa5.51□□□□□ -1.53
USP46-205ENST00000504078 GTPBP6O43824 516 aaPredicted RBP5.51□□□□□ -1.53
USP46-205ENST00000504078 CHRNA2Q15822 529 aa5.51□□□□□ -1.53
USP46-205ENST00000504078 TSR1Q2NL82 804 aaKnown RBP5.51□□□□□ -1.53
USP46-205ENST00000504078 ZNF697Q5TEC3 545 aa5.51□□□□□ -1.53
USP46-205ENST00000504078 SLF2Q8IX21 1173 aa5.51□□□□□ -1.53
USP46-205ENST00000504078 DDX12PQ92771 950 aa5.51□□□□□ -1.53
USP46-205ENST00000504078 HIRIP3Q9BW71 556 aaPredicted RBP5.51□□□□□ -1.53
USP46-205ENST00000504078 PRR14Q9BWN1 585 aa5.51□□□□□ -1.53
USP46-205ENST00000504078 STRN4Q9NRL3 753 aa5.51□□□□□ -1.53
USP46-205ENST00000504078 USP35Q9P2H5 1018 aa5.51□□□□□ -1.53
USP46-205ENST00000504078 CASZ1Q86V15 1759 aa5.51□□□□□ -1.53
USP46-205ENST00000504078 ARHGEF10O15013 1369 aa5.51□□□□□ -1.53
USP46-205ENST00000504078 LRRC37A3O60309 1634 aa5.5□□□□□ -1.53
USP46-205ENST00000504078 RNF40O75150 1001 aa5.5□□□□□ -1.53
USP46-205ENST00000504078 APBA3O96018 575 aa5.5□□□□□ -1.53
USP46-205ENST00000504078 SLC4A3P48751 1232 aa5.5□□□□□ -1.53
USP46-205ENST00000504078 NUTM2GQ5VZR2 741 aa5.5□□□□□ -1.53
USP46-205ENST00000504078 CRIPAKQ8N1N5 446 aa5.5□□□□□ -1.53
USP46-205ENST00000504078 FAM198AQ9UFP1 575 aa5.5□□□□□ -1.53
USP46-205ENST00000504078 SBNO1A3KN83 1393 aa5.5□□□□□ -1.53
USP46-205ENST00000504078 SPATA31A5Q5VU36 1347 aa5.49□□□□□ -1.53
USP46-205ENST00000504078 SPATA31A7Q8IWB4 1347 aa5.49□□□□□ -1.53
USP46-205ENST00000504078 DPYSL4O14531 572 aa5.49□□□□□ -1.53
USP46-205ENST00000504078 ST8SIA5O15466 376 aa5.49□□□□□ -1.53
USP46-205ENST00000504078 NFX1Q12986 1120 aaKnown RBP5.49□□□□□ -1.53
USP46-205ENST00000504078 NBR1Q14596 966 aa5.49□□□□□ -1.53
USP46-205ENST00000504078 PRAM1Q96QH2 718 aa5.49□□□□□ -1.53
USP46-205ENST00000504078 PRDM11Q9NQV5 511 aa5.49□□□□□ -1.53
USP46-205ENST00000504078 KIAA0232Q92628 1395 aa5.49□□□□□ -1.53
USP46-205ENST00000504078 PRR36Q9H6K5 1346 aa5.48□□□□□ -1.53
USP46-205ENST00000504078 SPATA31E1Q6ZUB1 1445 aa5.48□□□□□ -1.53
USP46-205ENST00000504078 TULP4Q9NRJ4 1543 aa5.48□□□□□ -1.53
USP46-205ENST00000504078 NINLQ9Y2I6 1382 aa5.48□□□□□ -1.53
USP46-205ENST00000504078 ZBTB7CA1YPR0 619 aa5.48□□□□□ -1.53
USP46-205ENST00000504078 PSME1Q06323 249 aa5.48□□□□□ -1.53
USP46-205ENST00000504078 LIAT1Q6ZQX7 453 aa5.48□□□□□ -1.53
USP46-205ENST00000504078 CAMKK2Q96RR4 588 aa5.48□□□□□ -1.53
USP46-205ENST00000504078 PDGFDQ9GZP0 370 aaPredicted RBP5.48□□□□□ -1.53
USP46-205ENST00000504078 WNK3Q9BYP7 1800 aa5.48□□□□□ -1.53
USP46-205ENST00000504078 SSH2Q76I76 1423 aa5.48□□□□□ -1.53
USP46-205ENST00000504078 MINK1Q8N4C8 1332 aaPredicted RBP5.48□□□□□ -1.53
USP46-205ENST00000504078 ABCC11Q96J66 1382 aa5.47□□□□□ -1.53
USP46-205ENST00000504078 TNFRSF10AO00220 468 aa5.47□□□□□ -1.53
USP46-205ENST00000504078 ZBTB7AO95365 584 aa5.47□□□□□ -1.53
USP46-205ENST00000504078 NUDT18Q6ZVK8 323 aa5.47□□□□□ -1.53
USP46-205ENST00000504078 ZNF784Q8NCA9 323 aaPredicted RBP5.47□□□□□ -1.53
USP46-205ENST00000504078 RBM27Q9P2N5 1060 aaKnown RBP5.47□□□□□ -1.53
USP46-205ENST00000504078 ITSN1Q15811 1721 aa5.47□□□□□ -1.53
USP46-205ENST00000504078 ANKARQ7Z5J8 1434 aa5.47□□□□□ -1.53
USP46-205ENST00000504078 SPATA31A1Q5TZJ5 1347 aa5.47□□□□□ -1.53
USP46-205ENST00000504078 RPGRIP1LQ68CZ1 1315 aa5.47□□□□□ -1.53
USP46-205ENST00000504078 ACIN1Q9UKV3 1341 aaKnown RBP5.47□□□□□ -1.53
USP46-205ENST00000504078 TOPAZ1Q8N9V7 1692 aa5.47□□□□□ -1.53
USP46-205ENST00000504078 LMO7Q8WWI1 1683 aa5.47□□□□□ -1.53
USP46-205ENST00000504078 ATP7BP35670 1465 aa5.46□□□□□ -1.53
USP46-205ENST00000504078 ARHGEF28Q8N1W1 1705 aaKnown RBP5.46□□□□□ -1.54
USP46-205ENST00000504078 PEAK1Q9H792 1746 aa5.46□□□□□ -1.54
USP46-205ENST00000504078 PARP4Q9UKK3 1724 aaKnown RBP5.46□□□□□ -1.54
USP46-205ENST00000504078 FAM181BA6NEQ2 426 aa5.46□□□□□ -1.54
USP46-205ENST00000504078 C11orf95C9JLR9 678 aaPredicted RBP5.46□□□□□ -1.54
USP46-205ENST00000504078 C3orf80F5H4A9 247 aa5.46□□□□□ -1.54
USP46-205ENST00000504078 ZC3H6P61129 1189 aaKnown RBP5.46□□□□□ -1.54
USP46-205ENST00000504078 CFAP70Q5T0N1 1121 aa5.46□□□□□ -1.54
USP46-205ENST00000504078 PTF1AQ7RTS3 328 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms