RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 SF3B2Q13435 895 aaKnown RBP19.43■□□□□ 0.7
SGCA-204ENST00000504073 DDX54Q8TDD1 881 aaKnown RBP19.43■□□□□ 0.7
SGCA-204ENST00000504073 TSR2Q969E8 191 aaKnown RBP19.43■□□□□ 0.7
SGCA-204ENST00000504073 SOS1Q07889 1333 aaPredicted RBP19.43■□□□□ 0.7
SGCA-204ENST00000504073 TNS2Q63HR2 1409 aa19.42■□□□□ 0.7
SGCA-204ENST00000504073 CABP4P57796 275 aa19.42■□□□□ 0.7
SGCA-204ENST00000504073 EXOSC9Q06265 439 aaKnown RBP19.42■□□□□ 0.7
SGCA-204ENST00000504073 A0A0G2JS52 829 aa19.41■□□□□ 0.7
SGCA-204ENST00000504073 BTBD11A6QL63 1104 aa19.41■□□□□ 0.7
SGCA-204ENST00000504073 ERVV-2B6SEH9 535 aa19.41■□□□□ 0.7
SGCA-204ENST00000504073 CYP27B1O15528 508 aa19.41■□□□□ 0.7
SGCA-204ENST00000504073 MYT1Q01538 1121 aa19.41■□□□□ 0.7
SGCA-204ENST00000504073 NKX1-1Q15270 411 aaPredicted RBP19.41■□□□□ 0.7
SGCA-204ENST00000504073 SUPT16HQ9Y5B9 1047 aaKnown RBP19.41■□□□□ 0.7
SGCA-204ENST00000504073 SCN11AQ9UI33 1791 aa19.41■□□□□ 0.7
SGCA-204ENST00000504073 VIRMAQ69YN4 1812 aaKnown RBP19.4■□□□□ 0.7
SGCA-204ENST00000504073 LGR6Q9HBX8 967 aa19.4■□□□□ 0.7
SGCA-204ENST00000504073 ADAMTS7Q9UKP4 1686 aa19.4■□□□□ 0.7
SGCA-204ENST00000504073 SLC52A2Q9HAB3 445 aa19.39■□□□□ 0.69
SGCA-204ENST00000504073 TWISTNBQ3B726 338 aaPredicted RBP19.38■□□□□ 0.69
SGCA-204ENST00000504073 CANXP27824 592 aaKnown RBP19.37■□□□□ 0.69
SGCA-204ENST00000504073 ALDH1L2Q3SY69 923 aa19.37■□□□□ 0.69
SGCA-204ENST00000504073 TTC5Q8N0Z6 440 aa19.37■□□□□ 0.69
SGCA-204ENST00000504073 KDM6AO15550 1401 aaPredicted RBP19.36■□□□□ 0.69
SGCA-204ENST00000504073 FAM98CQ17RN3 349 aaKnown RBP19.36■□□□□ 0.69
SGCA-204ENST00000504073 MRC1P22897 1456 aa19.35■□□□□ 0.69
SGCA-204ENST00000504073 MS4A1P11836 297 aa19.35■□□□□ 0.69
SGCA-204ENST00000504073 SEPT12Q8IYM1 358 aa19.35■□□□□ 0.69
SGCA-204ENST00000504073 SHANK3Q9BYB0 1731 aa19.34■□□□□ 0.69
SGCA-204ENST00000504073 HOXB7P09629 217 aa19.34■□□□□ 0.69
SGCA-204ENST00000504073 RRP1P56182 461 aaKnown RBP19.34■□□□□ 0.69
SGCA-204ENST00000504073 SMC4Q9NTJ3 1288 aa19.34■□□□□ 0.69
SGCA-204ENST00000504073 TMOD3Q9NYL9 352 aa19.34■□□□□ 0.69
SGCA-204ENST00000504073 KIF16BQ96L93 1317 aa19.33■□□□□ 0.69
SGCA-204ENST00000504073 IPO8O15397 1037 aaKnown RBP19.33■□□□□ 0.68
SGCA-204ENST00000504073 RARSP54136 660 aaKnown RBP19.33■□□□□ 0.68
SGCA-204ENST00000504073 NFATC2IPQ8NCF5 419 aa19.33■□□□□ 0.68
SGCA-204ENST00000504073 MIS18AQ9NYP9 233 aa19.33■□□□□ 0.68
SGCA-204ENST00000504073 YY1P25490 414 aa19.32■□□□□ 0.68
SGCA-204ENST00000504073 SIPA1L3O60292 1781 aaPredicted RBP19.32■□□□□ 0.68
SGCA-204ENST00000504073 KDM3BQ7LBC6 1761 aa19.32■□□□□ 0.68
SGCA-204ENST00000504073 RNF123Q5XPI4 1314 aa19.31■□□□□ 0.68
SGCA-204ENST00000504073 VAMP4O75379 141 aa19.31■□□□□ 0.68
SGCA-204ENST00000504073 ERICH6BQ5W0A0 696 aa19.31■□□□□ 0.68
SGCA-204ENST00000504073 STK31Q9BXU1 1019 aa19.31■□□□□ 0.68
SGCA-204ENST00000504073 BAG6P46379 1132 aa19.3■□□□□ 0.68
SGCA-204ENST00000504073 CCDC30Q5VVM6 783 aa19.3■□□□□ 0.68
SGCA-204ENST00000504073 ZNF790Q6PG37 636 aa19.3■□□□□ 0.68
SGCA-204ENST00000504073 KRT27Q7Z3Y8 459 aa19.3■□□□□ 0.68
SGCA-204ENST00000504073 C8orf58Q8NAV2 365 aa19.3■□□□□ 0.68
SGCA-204ENST00000504073 ELL2O00472 640 aaPredicted RBP19.29■□□□□ 0.68
SGCA-204ENST00000504073 EIF4A1P60842 406 aaKnown RBP19.29■□□□□ 0.68
SGCA-204ENST00000504073 R3HDM1Q15032 1099 aaKnown RBP19.29■□□□□ 0.68
SGCA-204ENST00000504073 FMNL2Q96PY5 1086 aa19.29■□□□□ 0.68
SGCA-204ENST00000504073 THSD7AQ9UPZ6 1657 aa19.27■□□□□ 0.68
SGCA-204ENST00000504073 ONECUT3O60422 494 aaPredicted RBP19.27■□□□□ 0.68
SGCA-204ENST00000504073 BRPF1P55201 1214 aaPredicted RBP19.27■□□□□ 0.68
SGCA-204ENST00000504073 KAT6BQ8WYB5 2073 aa19.27■□□□□ 0.68
SGCA-204ENST00000504073 EN1Q05925 392 aaPredicted RBP19.26■□□□□ 0.67
SGCA-204ENST00000504073 ZKSCAN2Q63HK3 967 aa19.26■□□□□ 0.67
SGCA-204ENST00000504073 TSPYL6Q8N831 410 aa19.26■□□□□ 0.67
SGCA-204ENST00000504073 SSH1Q8WYL5 1049 aa19.26■□□□□ 0.67
SGCA-204ENST00000504073 FRAT1Q92837 279 aaPredicted RBP19.26■□□□□ 0.67
SGCA-204ENST00000504073 SYTL4Q96C24 671 aaPredicted RBP19.26■□□□□ 0.67
SGCA-204ENST00000504073 GTF3C3Q9Y5Q9 886 aa19.26■□□□□ 0.67
SGCA-204ENST00000504073 BCAR3O75815 825 aa19.25■□□□□ 0.67
SGCA-204ENST00000504073 HDGFL1Q5TGJ6 251 aa19.25■□□□□ 0.67
SGCA-204ENST00000504073 MARCH10Q8NA82 808 aaPredicted RBP19.25■□□□□ 0.67
SGCA-204ENST00000504073 CACNA1FO60840 1977 aa19.24■□□□□ 0.67
SGCA-204ENST00000504073 SNRPA1P09661 255 aaKnown RBP19.24■□□□□ 0.67
SGCA-204ENST00000504073 FKBP8Q14318 412 aa19.24■□□□□ 0.67
SGCA-204ENST00000504073 PDE3AQ14432 1141 aa19.24■□□□□ 0.67
SGCA-204ENST00000504073 FTSJ3Q8IY81 847 aaKnown RBP19.23■□□□□ 0.67
SGCA-204ENST00000504073 ARHGAP45Q92619 1136 aa19.23■□□□□ 0.67
SGCA-204ENST00000504073 SMARCC1Q92922 1105 aaPredicted RBP19.23■□□□□ 0.67
SGCA-204ENST00000504073 BCL2L13Q9BXK5 485 aa19.23■□□□□ 0.67
SGCA-204ENST00000504073 TEX13AQ9BXU3 409 aaPredicted RBP19.23■□□□□ 0.67
SGCA-204ENST00000504073 GIGYF1O75420 1035 aaPredicted RBP19.22■□□□□ 0.67
SGCA-204ENST00000504073 SLC39A6Q13433 755 aa19.22■□□□□ 0.67
SGCA-204ENST00000504073 API5Q9BZZ5 524 aaKnown RBP19.22■□□□□ 0.67
SGCA-204ENST00000504073 ITGB4P16144 1822 aa19.21■□□□□ 0.67
SGCA-204ENST00000504073 BCL9O00512 1426 aa19.21■□□□□ 0.67
SGCA-204ENST00000504073 PRIM1P49642 420 aaKnown RBP19.21■□□□□ 0.67
SGCA-204ENST00000504073 KRT24Q2M2I5 525 aa19.21■□□□□ 0.67
SGCA-204ENST00000504073 MRPL50Q8N5N7 158 aaKnown RBP19.21■□□□□ 0.67
SGCA-204ENST00000504073 DOT1LQ8TEK3 1739 aa19.21■□□□□ 0.67
SGCA-204ENST00000504073 CHMP4BQ9H444 224 aaKnown RBP19.21■□□□□ 0.67
SGCA-204ENST00000504073 TOGARAM1Q9Y4F4 1720 aa19.21■□□□□ 0.67
SGCA-204ENST00000504073 PTPRCP08575 1304 aa19.21■□□□□ 0.67
SGCA-204ENST00000504073 KCNQ3O43525 872 aa19.2■□□□□ 0.66
SGCA-204ENST00000504073 EIF2S2P20042 333 aaKnown RBP19.2■□□□□ 0.66
SGCA-204ENST00000504073 VSIG10Q8N0Z9 540 aa19.2■□□□□ 0.66
SGCA-204ENST00000504073 PIGBQ92521 554 aa19.2■□□□□ 0.66
SGCA-204ENST00000504073 DBF4Q9UBU7 674 aaPredicted RBP19.2■□□□□ 0.66
SGCA-204ENST00000504073 HEG1Q9ULI3 1381 aa19.19■□□□□ 0.66
SGCA-204ENST00000504073 SLC4A2P04920 1241 aa19.19■□□□□ 0.66
SGCA-204ENST00000504073 ATF7IPQ6VMQ6 1270 aa19.19■□□□□ 0.66
SGCA-204ENST00000504073 ZNF496Q96IT1 587 aaPredicted RBP19.19■□□□□ 0.66
SGCA-204ENST00000504073 PAPPAQ13219 1627 aa19.18■□□□□ 0.66
SGCA-204ENST00000504073 HMGB2P26583 209 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms