RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 LBX1P52954 281 aa16.49■□□□□ 0.23
TNPO1-202ENST00000503084 DALRD3Q5D0E6 543 aaKnown RBP16.49■□□□□ 0.23
TNPO1-202ENST00000503084 RAB3GAP2Q9H2M9 1393 aa16.49■□□□□ 0.23
TNPO1-202ENST00000503084 TNRC18O15417 2968 aaPredicted RBP16.48■□□□□ 0.23
TNPO1-202ENST00000503084 LOC102724428A0A0B4J2F2 783 aa16.48■□□□□ 0.23
TNPO1-202ENST00000503084 SIK1P57059 783 aa16.48■□□□□ 0.23
TNPO1-202ENST00000503084 RASSF7Q02833 373 aa16.48■□□□□ 0.23
TNPO1-202ENST00000503084 PIM2Q9P1W9 311 aa16.48■□□□□ 0.23
TNPO1-202ENST00000503084 PCDH11XQ9BZA7 1347 aa16.47■□□□□ 0.23
TNPO1-202ENST00000503084 PCDH11YQ9BZA8 1340 aa16.47■□□□□ 0.23
TNPO1-202ENST00000503084 GLTPD2A6NH11 291 aa16.47■□□□□ 0.23
TNPO1-202ENST00000503084 RGS19P49795 217 aa16.47■□□□□ 0.23
TNPO1-202ENST00000503084 ITPK1Q13572 414 aa16.47■□□□□ 0.23
TNPO1-202ENST00000503084 USHBP1Q8N6Y0 703 aa16.47■□□□□ 0.23
TNPO1-202ENST00000503084 CGNL1Q0VF96 1302 aa16.46■□□□□ 0.23
TNPO1-202ENST00000503084 EDC4Q6P2E9 1401 aaKnown RBP16.46■□□□□ 0.23
TNPO1-202ENST00000503084 HOXC9P31274 260 aa16.46■□□□□ 0.23
TNPO1-202ENST00000503084 TMF1P82094 1093 aa16.46■□□□□ 0.23
TNPO1-202ENST00000503084 MAP3K19Q56UN5 1328 aa16.45■□□□□ 0.22
TNPO1-202ENST00000503084 NLGN1Q8N2Q7 840 aa16.45■□□□□ 0.22
TNPO1-202ENST00000503084 PIGBQ92521 554 aa16.45■□□□□ 0.22
TNPO1-202ENST00000503084 CCDC85CA6NKD9 419 aa16.44■□□□□ 0.22
TNPO1-202ENST00000503084 RAPGEF4Q8WZA2 1011 aa16.44■□□□□ 0.22
TNPO1-202ENST00000503084 PARP3Q9Y6F1 533 aa16.44■□□□□ 0.22
TNPO1-202ENST00000503084 POTECB2RU33 542 aa16.43■□□□□ 0.22
TNPO1-202ENST00000503084 CYP27B1O15528 508 aa16.43■□□□□ 0.22
TNPO1-202ENST00000503084 HSPA8P11142 646 aaKnown RBP16.43■□□□□ 0.22
TNPO1-202ENST00000503084 NBPF6Q5VWK0 638 aa16.43■□□□□ 0.22
TNPO1-202ENST00000503084 NBPF4Q96M43 638 aa16.43■□□□□ 0.22
TNPO1-202ENST00000503084 WBP1LQ9NX94 342 aa16.43■□□□□ 0.22
TNPO1-202ENST00000503084 GYS1P13807 737 aa16.42■□□□□ 0.22
TNPO1-202ENST00000503084 CHRNA5P30532 468 aa16.42■□□□□ 0.22
TNPO1-202ENST00000503084 VIRMAQ69YN4 1812 aaKnown RBP16.42■□□□□ 0.22
TNPO1-202ENST00000503084 TATP17735 454 aaPredicted RBP16.41■□□□□ 0.22
TNPO1-202ENST00000503084 VEGFBP49765 207 aa16.41■□□□□ 0.22
TNPO1-202ENST00000503084 LMNB1P20700 586 aa16.4■□□□□ 0.22
TNPO1-202ENST00000503084 AMPHP49418 695 aa16.4■□□□□ 0.22
TNPO1-202ENST00000503084 FBLN1P23142 703 aa16.39■□□□□ 0.21
TNPO1-202ENST00000503084 ATP6V1AP38606 617 aa16.39■□□□□ 0.21
TNPO1-202ENST00000503084 TRAPPC3LQ5T215 181 aa16.39■□□□□ 0.21
TNPO1-202ENST00000503084 CHADLQ6NUI6 762 aa16.39■□□□□ 0.21
TNPO1-202ENST00000503084 RTCBQ9Y3I0 505 aaKnown RBP16.39■□□□□ 0.21
TNPO1-202ENST00000503084 A0A1W2PP64 1363 aa16.38■□□□□ 0.21
TNPO1-202ENST00000503084 RTL1A6NKG5 1358 aa16.38■□□□□ 0.21
TNPO1-202ENST00000503084 KDRP35968 1356 aa16.38■□□□□ 0.21
TNPO1-202ENST00000503084 POTEIP0CG38 1075 aa16.38■□□□□ 0.21
TNPO1-202ENST00000503084 POTEJP0CG39 1038 aa16.38■□□□□ 0.21
TNPO1-202ENST00000503084 ARHGEF1Q92888 912 aaKnown RBP16.38■□□□□ 0.21
TNPO1-202ENST00000503084 ASAP1Q9ULH1 1129 aa16.38■□□□□ 0.21
TNPO1-202ENST00000503084 HDGFL2Q7Z4V5 671 aaPredicted RBP16.37■□□□□ 0.21
TNPO1-202ENST00000503084 SMG6Q86US8 1419 aaKnown RBP16.36■□□□□ 0.21
TNPO1-202ENST00000503084 ADRA2BP18089 450 aa16.36■□□□□ 0.21
TNPO1-202ENST00000503084 DDR1Q08345 913 aa16.36■□□□□ 0.21
TNPO1-202ENST00000503084 COL5A3P25940 1745 aaPredicted RBP16.36■□□□□ 0.21
TNPO1-202ENST00000503084 CCDC88AQ3V6T2 1871 aa16.35■□□□□ 0.21
TNPO1-202ENST00000503084 TMC1Q8TDI8 760 aa16.35■□□□□ 0.21
TNPO1-202ENST00000503084 PASKQ96RG2 1323 aa16.35■□□□□ 0.21
TNPO1-202ENST00000503084 RFC4P35249 363 aa16.34■□□□□ 0.21
TNPO1-202ENST00000503084 TMOD3Q9NYL9 352 aa16.34■□□□□ 0.21
TNPO1-202ENST00000503084 NFKBIEO00221 500 aa16.33■□□□□ 0.2
TNPO1-202ENST00000503084 SLC12A5Q9H2X9 1139 aa16.33■□□□□ 0.2
TNPO1-202ENST00000503084 RRS1Q15050 365 aaKnown RBP16.32■□□□□ 0.2
TNPO1-202ENST00000503084 CNTNAP4Q9C0A0 1308 aa16.32■□□□□ 0.2
TNPO1-202ENST00000503084 DLEC1Q9Y238 1755 aa16.32■□□□□ 0.2
TNPO1-202ENST00000503084 ZNF831Q5JPB2 1677 aa16.31■□□□□ 0.2
TNPO1-202ENST00000503084 FKBP8Q14318 412 aa16.31■□□□□ 0.2
TNPO1-202ENST00000503084 NKX1-1Q15270 411 aaPredicted RBP16.31■□□□□ 0.2
TNPO1-202ENST00000503084 COG3Q96JB2 828 aa16.31■□□□□ 0.2
TNPO1-202ENST00000503084 CFAP44Q96MT7 982 aa16.31■□□□□ 0.2
TNPO1-202ENST00000503084 SLC4A9Q96Q91 983 aa16.31■□□□□ 0.2
TNPO1-202ENST00000503084 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
TNPO1-202ENST00000503084 MYH14Q7Z406 1995 aaKnown RBP16.3■□□□□ 0.2
TNPO1-202ENST00000503084 TMEM88BA6NKF7 163 aa16.3■□□□□ 0.2
TNPO1-202ENST00000503084 ATG3Q9NT62 314 aa16.3■□□□□ 0.2
TNPO1-202ENST00000503084 THSD7BQ9C0I4 1608 aa16.3■□□□□ 0.2
TNPO1-202ENST00000503084 ROCK2O75116 1388 aaKnown RBP16.29■□□□□ 0.2
TNPO1-202ENST00000503084 RPS6KA4O75676 772 aa16.29■□□□□ 0.2
TNPO1-202ENST00000503084 DPY19L2Q6NUT2 758 aa16.29■□□□□ 0.2
TNPO1-202ENST00000503084 TERF2IPQ9NYB0 399 aa16.29■□□□□ 0.2
TNPO1-202ENST00000503084 MAP2K1Q02750 393 aaPredicted RBP16.28■□□□□ 0.2
TNPO1-202ENST00000503084 RC3H1Q5TC82 1133 aaKnown RBP16.28■□□□□ 0.2
TNPO1-202ENST00000503084 RASSF10A6NK89 507 aa16.27■□□□□ 0.2
TNPO1-202ENST00000503084 POLRMTO00411 1230 aaKnown RBP16.27■□□□□ 0.2
TNPO1-202ENST00000503084 INSRP06213 1382 aa16.26■□□□□ 0.19
TNPO1-202ENST00000503084 USP42Q9H9J4 1324 aaKnown RBP16.26■□□□□ 0.19
TNPO1-202ENST00000503084 DICER1Q9UPY3 1922 aaKnown RBP16.26■□□□□ 0.19
TNPO1-202ENST00000503084 LDHDQ86WU2 507 aa16.26■□□□□ 0.19
TNPO1-202ENST00000503084 WDR33Q9C0J8 1336 aaKnown RBP16.25■□□□□ 0.19
TNPO1-202ENST00000503084 HSP90AB2PQ58FF8 381 aa16.25■□□□□ 0.19
TNPO1-202ENST00000503084 NCAPD2Q15021 1401 aa16.25■□□□□ 0.19
TNPO1-202ENST00000503084 LTBP1Q14766 1721 aa16.25■□□□□ 0.19
TNPO1-202ENST00000503084 ERFEQ4G0M1 354 aa16.24■□□□□ 0.19
TNPO1-202ENST00000503084 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
TNPO1-202ENST00000503084 ADAMTS7Q9UKP4 1686 aa16.24■□□□□ 0.19
TNPO1-202ENST00000503084 AFDNP55196 1824 aaKnown RBP16.24■□□□□ 0.19
TNPO1-202ENST00000503084 DDNO94850 711 aaPredicted RBP16.23■□□□□ 0.19
TNPO1-202ENST00000503084 ITGBL1O95965 494 aaPredicted RBP16.23■□□□□ 0.19
TNPO1-202ENST00000503084 TTLL6Q8N841 843 aa16.23■□□□□ 0.19
TNPO1-202ENST00000503084 MCOLN1Q9GZU1 580 aa16.23■□□□□ 0.19
TNPO1-202ENST00000503084 NRXN2Q9P2S2 1712 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms