RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 RGPD4Q7Z3J3 1758 aa23.55■■□□□ 1.36
CCHCR1-216ENST00000502557 KCNQ4P56696 695 aa23.54■■□□□ 1.36
CCHCR1-216ENST00000502557 TEFQ10587 303 aa23.54■■□□□ 1.36
CCHCR1-216ENST00000502557 SLC27A3Q5K4L6 730 aa23.54■■□□□ 1.36
CCHCR1-216ENST00000502557 RRP7AQ9Y3A4 280 aaKnown RBP23.54■■□□□ 1.36
CCHCR1-216ENST00000502557 RIPK4P57078 832 aa23.53■■□□□ 1.36
CCHCR1-216ENST00000502557 CCNL1Q9UK58 526 aaPredicted RBP23.53■■□□□ 1.36
CCHCR1-216ENST00000502557 RREB1Q92766 1687 aa23.52■■□□□ 1.36
CCHCR1-216ENST00000502557 CCER2I3L3R5 266 aa23.51■■□□□ 1.35
CCHCR1-216ENST00000502557 ITGB4P16144 1822 aa23.5■■□□□ 1.35
CCHCR1-216ENST00000502557 LOC102724428A0A0B4J2F2 783 aa23.5■■□□□ 1.35
CCHCR1-216ENST00000502557 APAF1O14727 1248 aa23.5■■□□□ 1.35
CCHCR1-216ENST00000502557 SIK1P57059 783 aa23.5■■□□□ 1.35
CCHCR1-216ENST00000502557 NEUROD2Q15784 382 aa23.5■■□□□ 1.35
CCHCR1-216ENST00000502557 MIER1Q8N108 512 aa23.5■■□□□ 1.35
CCHCR1-216ENST00000502557 ANO8Q9HCE9 1232 aaPredicted RBP23.5■■□□□ 1.35
CCHCR1-216ENST00000502557 SCN11AQ9UI33 1791 aa23.5■■□□□ 1.35
CCHCR1-216ENST00000502557 SLC39A6Q13433 755 aa23.49■■□□□ 1.35
CCHCR1-216ENST00000502557 NBPF14Q5TI25 921 aa23.49■■□□□ 1.35
CCHCR1-216ENST00000502557 FAM9BQ8IZU0 186 aa23.49■■□□□ 1.35
CCHCR1-216ENST00000502557 THUMPD2Q9BTF0 503 aaKnown RBP23.49■■□□□ 1.35
CCHCR1-216ENST00000502557 NUP188Q5SRE5 1749 aa23.47■■□□□ 1.35
CCHCR1-216ENST00000502557 LMOD3Q0VAK6 560 aa23.47■■□□□ 1.35
CCHCR1-216ENST00000502557 SLC4A9Q96Q91 983 aa23.47■■□□□ 1.35
CCHCR1-216ENST00000502557 RBM42Q9BTD8 480 aaKnown RBP23.47■■□□□ 1.35
CCHCR1-216ENST00000502557 PTCD1O75127 700 aaKnown RBP23.46■■□□□ 1.35
CCHCR1-216ENST00000502557 TRIM35Q9UPQ4 493 aa23.46■■□□□ 1.35
CCHCR1-216ENST00000502557 BTBD11A6QL63 1104 aa23.45■■□□□ 1.34
CCHCR1-216ENST00000502557 ATP6V1AP38606 617 aa23.45■■□□□ 1.34
CCHCR1-216ENST00000502557 ITPK1Q13572 414 aa23.45■■□□□ 1.34
CCHCR1-216ENST00000502557 R3HDM1Q15032 1099 aaKnown RBP23.45■■□□□ 1.34
CCHCR1-216ENST00000502557 STK32BQ9NY57 414 aa23.45■■□□□ 1.34
CCHCR1-216ENST00000502557 LY75O60449 1722 aa23.45■■□□□ 1.34
CCHCR1-216ENST00000502557 TAF7Q15545 349 aaPredicted RBP23.44■■□□□ 1.34
CCHCR1-216ENST00000502557 ZNF827Q17R98 1081 aa23.44■■□□□ 1.34
CCHCR1-216ENST00000502557 ZNF790Q6PG37 636 aa23.44■■□□□ 1.34
CCHCR1-216ENST00000502557 PSDA5PKW4 1024 aaPredicted RBP23.43■■□□□ 1.34
CCHCR1-216ENST00000502557 KCNQ3O43525 872 aa23.43■■□□□ 1.34
CCHCR1-216ENST00000502557 SLC15A2Q16348 729 aa23.43■■□□□ 1.34
CCHCR1-216ENST00000502557 TTC5Q8N0Z6 440 aa23.43■■□□□ 1.34
CCHCR1-216ENST00000502557 AKT1S1Q96B36 256 aa23.43■■□□□ 1.34
CCHCR1-216ENST00000502557 PAPPAQ13219 1627 aa23.43■■□□□ 1.34
CCHCR1-216ENST00000502557 KAT6BQ8WYB5 2073 aa23.42■■□□□ 1.34
CCHCR1-216ENST00000502557 LINC00116Q8NCU8 138 aa23.42■■□□□ 1.34
CCHCR1-216ENST00000502557 SENP3-EIF4A1A0A087X0R7 540 aa23.41■■□□□ 1.34
CCHCR1-216ENST00000502557 MIS18AQ9NYP9 233 aa23.41■■□□□ 1.34
CCHCR1-216ENST00000502557 KCPQ6ZWJ8 1503 aa23.41■■□□□ 1.34
CCHCR1-216ENST00000502557 HMGB2P26583 209 aaKnown RBP23.4■■□□□ 1.34
CCHCR1-216ENST00000502557 ZNF496Q96IT1 587 aaPredicted RBP23.4■■□□□ 1.34
CCHCR1-216ENST00000502557 VSIG10Q8N0Z9 540 aa23.37■■□□□ 1.33
CCHCR1-216ENST00000502557 SIPA1L3O60292 1781 aaPredicted RBP23.37■■□□□ 1.33
CCHCR1-216ENST00000502557 DNAJC10Q8IXB1 793 aa23.36■■□□□ 1.33
CCHCR1-216ENST00000502557 FMNL2Q96PY5 1086 aa23.36■■□□□ 1.33
CCHCR1-216ENST00000502557 TFCP2L1Q9NZI6 479 aa23.36■■□□□ 1.33
CCHCR1-216ENST00000502557 HEG1Q9ULI3 1381 aa23.36■■□□□ 1.33
CCHCR1-216ENST00000502557 NCBP3Q53F19 620 aaKnown RBP23.35■■□□□ 1.33
CCHCR1-216ENST00000502557 DLG5Q8TDM6 1919 aa23.35■■□□□ 1.33
CCHCR1-216ENST00000502557 CCDC27Q2M243 656 aa23.34■■□□□ 1.33
CCHCR1-216ENST00000502557 AK7Q96M32 723 aa23.34■■□□□ 1.33
CCHCR1-216ENST00000502557 BABAM1Q9NWV8 329 aa23.34■■□□□ 1.33
CCHCR1-216ENST00000502557 TSPYL4Q9UJ04 414 aa23.34■■□□□ 1.33
CCHCR1-216ENST00000502557 RC3H1Q5TC82 1133 aaKnown RBP23.33■■□□□ 1.33
CCHCR1-216ENST00000502557 PDGFDQ9GZP0 370 aaPredicted RBP23.33■■□□□ 1.33
CCHCR1-216ENST00000502557 PNPLA7Q6ZV29 1317 aa23.33■■□□□ 1.32
CCHCR1-216ENST00000502557 CNTNAP4Q9C0A0 1308 aa23.33■■□□□ 1.32
CCHCR1-216ENST00000502557 ZNF831Q5JPB2 1677 aa23.32■■□□□ 1.32
CCHCR1-216ENST00000502557 CHL1O00533 1208 aa23.32■■□□□ 1.32
CCHCR1-216ENST00000502557 AMIGO3Q86WK7 504 aa23.32■■□□□ 1.32
CCHCR1-216ENST00000502557 C5P01031 1676 aa23.32■■□□□ 1.32
CCHCR1-216ENST00000502557 VIRMAQ69YN4 1812 aaKnown RBP23.31■■□□□ 1.32
CCHCR1-216ENST00000502557 CYP19A1P11511 503 aaPredicted RBP23.31■■□□□ 1.32
CCHCR1-216ENST00000502557 CRKLP46109 303 aaKnown RBP23.31■■□□□ 1.32
CCHCR1-216ENST00000502557 EIF4A1P60842 406 aaKnown RBP23.31■■□□□ 1.32
CCHCR1-216ENST00000502557 WWC1Q8IX03 1113 aa23.31■■□□□ 1.32
CCHCR1-216ENST00000502557 LAS1LQ9Y4W2 734 aaKnown RBP23.31■■□□□ 1.32
CCHCR1-216ENST00000502557 C4BP0C0L5 1744 aa23.3■■□□□ 1.32
CCHCR1-216ENST00000502557 GNPATO15228 680 aa23.3■■□□□ 1.32
CCHCR1-216ENST00000502557 CALD1Q05682 793 aaKnown RBP23.3■■□□□ 1.32
CCHCR1-216ENST00000502557 SMIM5Q71RC9 77 aa23.3■■□□□ 1.32
CCHCR1-216ENST00000502557 SALL2Q9Y467 1007 aaPredicted RBP23.3■■□□□ 1.32
CCHCR1-216ENST00000502557 UBR2Q8IWV8 1755 aa23.29■■□□□ 1.32
CCHCR1-216ENST00000502557 PRAMEF22A3QJZ6 481 aa23.29■■□□□ 1.32
CCHCR1-216ENST00000502557 SNRPA1P09661 255 aaKnown RBP23.29■■□□□ 1.32
CCHCR1-216ENST00000502557 ZNF853P0CG23 659 aa23.29■■□□□ 1.32
CCHCR1-216ENST00000502557 INTS5Q6P9B9 1019 aaKnown RBP23.29■■□□□ 1.32
CCHCR1-216ENST00000502557 CFAP44Q96MT7 982 aa23.29■■□□□ 1.32
CCHCR1-216ENST00000502557 TEX13AQ9BXU3 409 aaPredicted RBP23.29■■□□□ 1.32
CCHCR1-216ENST00000502557 CICQ96RK0 1608 aaPredicted RBP23.29■■□□□ 1.32
CCHCR1-216ENST00000502557 TJP1Q07157 1748 aa23.28■■□□□ 1.32
CCHCR1-216ENST00000502557 COL23A1Q86Y22 540 aaPredicted RBP23.28■■□□□ 1.32
CCHCR1-216ENST00000502557 CCDC87Q9NVE4 849 aa23.28■■□□□ 1.32
CCHCR1-216ENST00000502557 RPS6KA4O75676 772 aa23.27■■□□□ 1.32
CCHCR1-216ENST00000502557 STARD3NLO95772 234 aa23.27■■□□□ 1.32
CCHCR1-216ENST00000502557 NGEFQ8N5V2 710 aa23.27■■□□□ 1.32
CCHCR1-216ENST00000502557 IFT57Q9NWB7 429 aa23.27■■□□□ 1.32
CCHCR1-216ENST00000502557 USP16Q9Y5T5 823 aa23.27■■□□□ 1.32
CCHCR1-216ENST00000502557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.26■■□□□ 1.31
CCHCR1-216ENST00000502557 PHF14O94880 888 aa23.26■■□□□ 1.31
CCHCR1-216ENST00000502557 SSFA2P28290 1259 aa23.26■■□□□ 1.31
CCHCR1-216ENST00000502557 FLAD1Q8NFF5 587 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms