RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 GLI3P10071 1580 aa11.55□□□□□ -0.56
CRNDE-202ENST00000502066 NRKQ7Z2Y5 1582 aa11.55□□□□□ -0.56
CRNDE-202ENST00000502066 SYT17Q9BSW7 474 aa11.55□□□□□ -0.56
CRNDE-202ENST00000502066 NKTRP30414 1462 aaKnown RBP11.55□□□□□ -0.56
CRNDE-202ENST00000502066 NCOA2Q15596 1464 aa11.55□□□□□ -0.56
CRNDE-202ENST00000502066 C14orf37Q86TY3 774 aa11.54□□□□□ -0.56
CRNDE-202ENST00000502066 JMYQ8N9B5 988 aa11.54□□□□□ -0.56
CRNDE-202ENST00000502066 RGPD1P0DJD0 1748 aa11.54□□□□□ -0.56
CRNDE-202ENST00000502066 ALDH1A1P00352 501 aa11.53□□□□□ -0.56
CRNDE-202ENST00000502066 TRIM47Q96LD4 638 aa11.53□□□□□ -0.56
CRNDE-202ENST00000502066 SLC26A8Q96RN1 970 aa11.53□□□□□ -0.56
CRNDE-202ENST00000502066 REPIN1Q9BWE0 567 aaKnown RBP11.53□□□□□ -0.56
CRNDE-202ENST00000502066 USP46P62068 366 aa11.52□□□□□ -0.57
CRNDE-202ENST00000502066 PTCRAQ6ISU1 281 aaPredicted RBP11.52□□□□□ -0.57
CRNDE-202ENST00000502066 DDX17Q92841 729 aaKnown RBP11.52□□□□□ -0.57
CRNDE-202ENST00000502066 FHDC1Q9C0D6 1143 aaPredicted RBP11.52□□□□□ -0.57
CRNDE-202ENST00000502066 GPBP1L1Q9HC44 474 aaPredicted RBP11.52□□□□□ -0.57
CRNDE-202ENST00000502066 PLXNC1O60486 1568 aa11.51□□□□□ -0.57
CRNDE-202ENST00000502066 TERTO14746 1132 aaKnown RBP11.51□□□□□ -0.57
CRNDE-202ENST00000502066 ATF3P18847 181 aa11.51□□□□□ -0.57
CRNDE-202ENST00000502066 GPR162Q16538 588 aa11.51□□□□□ -0.57
CRNDE-202ENST00000502066 CCDC102AQ96A19 550 aa11.51□□□□□ -0.57
CRNDE-202ENST00000502066 SENP2Q9HC62 589 aa11.51□□□□□ -0.57
CRNDE-202ENST00000502066 MYOM1P52179 1685 aa11.51□□□□□ -0.57
CRNDE-202ENST00000502066 JUNDP17535 347 aa11.5□□□□□ -0.57
CRNDE-202ENST00000502066 WNT7BP56706 349 aa11.5□□□□□ -0.57
CRNDE-202ENST00000502066 MLLT1Q03111 559 aaPredicted RBP11.5□□□□□ -0.57
CRNDE-202ENST00000502066 NBPF8Q3BBV2 869 aa11.5□□□□□ -0.57
CRNDE-202ENST00000502066 NBPF14Q5TI25 921 aa11.5□□□□□ -0.57
CRNDE-202ENST00000502066 KLRG1Q96E93 195 aa11.5□□□□□ -0.57
CRNDE-202ENST00000502066 CAMKK2Q96RR4 588 aa11.5□□□□□ -0.57
CRNDE-202ENST00000502066 EID1Q9Y6B2 187 aa11.5□□□□□ -0.57
CRNDE-202ENST00000502066 MINK1Q8N4C8 1332 aaPredicted RBP11.5□□□□□ -0.57
CRNDE-202ENST00000502066 PTCH1Q13635 1447 aa11.5□□□□□ -0.57
CRNDE-202ENST00000502066 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.49□□□□□ -0.57
CRNDE-202ENST00000502066 HNRNPMP52272 730 aaKnown RBP eCLIP11.49□□□□□ -0.57
CRNDE-202ENST00000502066 DISP2A7MBM2 1401 aa11.49□□□□□ -0.57
CRNDE-202ENST00000502066 MROH1Q8NDA8 1641 aa11.49□□□□□ -0.57
CRNDE-202ENST00000502066 UBR1Q8IWV7 1749 aa11.49□□□□□ -0.57
CRNDE-202ENST00000502066 WIPF1O43516 503 aa11.48□□□□□ -0.57
CRNDE-202ENST00000502066 ATP10DQ9P241 1426 aa11.48□□□□□ -0.57
CRNDE-202ENST00000502066 ASXL1Q8IXJ9 1541 aa11.48□□□□□ -0.57
CRNDE-202ENST00000502066 NUTM1Q86Y26 1132 aa11.47□□□□□ -0.57
CRNDE-202ENST00000502066 NUDT12Q9BQG2 462 aa11.47□□□□□ -0.57
CRNDE-202ENST00000502066 GPCPD1Q9NPB8 672 aa11.47□□□□□ -0.57
CRNDE-202ENST00000502066 FAM217BQ9NTX9 383 aaPredicted RBP11.47□□□□□ -0.57
CRNDE-202ENST00000502066 SAMD9Q5K651 1589 aa11.46□□□□□ -0.57
CRNDE-202ENST00000502066 BMP1P13497 986 aa11.46□□□□□ -0.57
CRNDE-202ENST00000502066 ZNF526Q8TF50 670 aaPredicted RBP11.46□□□□□ -0.57
CRNDE-202ENST00000502066 TNS1Q9HBL0 1735 aaKnown RBP11.46□□□□□ -0.58
CRNDE-202ENST00000502066 SAMD9LQ8IVG5 1584 aa11.45□□□□□ -0.58
CRNDE-202ENST00000502066 SLIT1O75093 1534 aa11.45□□□□□ -0.58
CRNDE-202ENST00000502066 SPAG9O60271 1321 aaKnown RBP11.45□□□□□ -0.58
CRNDE-202ENST00000502066 PCNTO95613 3336 aa11.45□□□□□ -0.58
CRNDE-202ENST00000502066 INSM1Q01101 510 aaPredicted RBP11.45□□□□□ -0.58
CRNDE-202ENST00000502066 EHBP1Q8NDI1 1231 aa11.45□□□□□ -0.58
CRNDE-202ENST00000502066 STK17AQ9UEE5 414 aa11.45□□□□□ -0.58
CRNDE-202ENST00000502066 PCDHGC3Q9UN70 934 aa11.45□□□□□ -0.58
CRNDE-202ENST00000502066 KIAA1210Q9ULL0 1709 aa11.45□□□□□ -0.58
CRNDE-202ENST00000502066 DLC1Q96QB1 1528 aa11.45□□□□□ -0.58
CRNDE-202ENST00000502066 SIAH2O43255 324 aa11.44□□□□□ -0.58
CRNDE-202ENST00000502066 CLCN1P35523 988 aa11.44□□□□□ -0.58
CRNDE-202ENST00000502066 HTRA3P83110 453 aa11.44□□□□□ -0.58
CRNDE-202ENST00000502066 FAM182BQ5T319 152 aa11.44□□□□□ -0.58
CRNDE-202ENST00000502066 KRI1Q8N9T8 703 aaKnown RBP11.44□□□□□ -0.58
CRNDE-202ENST00000502066 C6orf229H3BNL8 230 aa11.43□□□□□ -0.58
CRNDE-202ENST00000502066 RETREG3Q86VR2 466 aa11.43□□□□□ -0.58
CRNDE-202ENST00000502066 KIFC2Q96AC6 838 aa11.43□□□□□ -0.58
CRNDE-202ENST00000502066 C19orf44Q9H6X5 657 aa11.43□□□□□ -0.58
CRNDE-202ENST00000502066 NUP188Q5SRE5 1749 aa11.43□□□□□ -0.58
CRNDE-202ENST00000502066 WDR90Q96KV7 1748 aa11.43□□□□□ -0.58
CRNDE-202ENST00000502066 CDC42BPBQ9Y5S2 1711 aa11.43□□□□□ -0.58
CRNDE-202ENST00000502066 TULP1O00294 542 aaPredicted RBP11.42□□□□□ -0.58
CRNDE-202ENST00000502066 HSPA1AP0DMV8 641 aaKnown RBP11.42□□□□□ -0.58
CRNDE-202ENST00000502066 HSPA1BP0DMV9 641 aaKnown RBP11.42□□□□□ -0.58
CRNDE-202ENST00000502066 FDX1P10109 184 aa11.42□□□□□ -0.58
CRNDE-202ENST00000502066 ARHGAP35Q9NRY4 1499 aa11.42□□□□□ -0.58
CRNDE-202ENST00000502066 WASHC2CQ9Y4E1 1318 aa11.41□□□□□ -0.58
CRNDE-202ENST00000502066 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.41□□□□□ -0.58
CRNDE-202ENST00000502066 SH3BP2P78314 561 aa11.41□□□□□ -0.58
CRNDE-202ENST00000502066 TRIM46Q7Z4K8 759 aa11.41□□□□□ -0.58
CRNDE-202ENST00000502066 UNC5CLQ8IV45 518 aa11.41□□□□□ -0.58
CRNDE-202ENST00000502066 WASF2Q9Y6W5 498 aa11.41□□□□□ -0.58
CRNDE-202ENST00000502066 CAPN5O15484 640 aaPredicted RBP11.4□□□□□ -0.58
CRNDE-202ENST00000502066 ZBTB7AO95365 584 aa11.4□□□□□ -0.58
CRNDE-202ENST00000502066 NDUFV2P19404 249 aa11.4□□□□□ -0.58
CRNDE-202ENST00000502066 VEGFBP49765 207 aa11.4□□□□□ -0.58
CRNDE-202ENST00000502066 RREB1Q92766 1687 aa11.4□□□□□ -0.59
CRNDE-202ENST00000502066 LINC01559Q495D7 138 aa11.39□□□□□ -0.59
CRNDE-202ENST00000502066 MARF1Q9Y4F3 1742 aaKnown RBP11.39□□□□□ -0.59
CRNDE-202ENST00000502066 TET3O43151 1660 aa11.39□□□□□ -0.59
CRNDE-202ENST00000502066 NCOA3Q9Y6Q9 1424 aa11.38□□□□□ -0.59
CRNDE-202ENST00000502066 APBA3O96018 575 aa11.38□□□□□ -0.59
CRNDE-202ENST00000502066 MS4A1P11836 297 aa11.38□□□□□ -0.59
CRNDE-202ENST00000502066 PARD3Q8TEW0 1356 aa11.38□□□□□ -0.59
CRNDE-202ENST00000502066 GPATCH8Q9UKJ3 1502 aaKnown RBP11.37□□□□□ -0.59
CRNDE-202ENST00000502066 CCNYL3P0C7X3 344 aa11.36□□□□□ -0.59
CRNDE-202ENST00000502066 SSTR3P32745 418 aaPredicted RBP11.36□□□□□ -0.59
CRNDE-202ENST00000502066 SPIRE2Q8WWL2 714 aa11.36□□□□□ -0.59
CRNDE-202ENST00000502066 BAP1Q92560 729 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms