RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 LGR6Q9HBX8 967 aa21.34■■□□□ 1.01
LMNA-217ENST00000498722 PAPPAQ13219 1627 aa21.34■■□□□ 1.01
LMNA-217ENST00000498722 MAPK8IP3Q9UPT6 1336 aa21.33■■□□□ 1.01
LMNA-217ENST00000498722 RNMTO43148 476 aaKnown RBP21.33■■□□□ 1.01
LMNA-217ENST00000498722 STK32BQ9NY57 414 aa21.33■■□□□ 1.01
LMNA-217ENST00000498722 ASAP1Q9ULH1 1129 aa21.33■■□□□ 1.01
LMNA-217ENST00000498722 TUBGCP6Q96RT7 1819 aa21.33■■□□□ 1.01
LMNA-217ENST00000498722 NFATC2IPQ8NCF5 419 aa21.32■■□□□ 1
LMNA-217ENST00000498722 ANO8Q9HCE9 1232 aaPredicted RBP21.32■■□□□ 1
LMNA-217ENST00000498722 LRRC4BQ9NT99 713 aa21.32■■□□□ 1
LMNA-217ENST00000498722 SIPA1L3O60292 1781 aaPredicted RBP21.32■■□□□ 1
LMNA-217ENST00000498722 SLC52A2Q9HAB3 445 aa21.3■■□□□ 1
LMNA-217ENST00000498722 PNISRQ8TF01 805 aaKnown RBP21.29■■□□□ 1
LMNA-217ENST00000498722 RTF1Q92541 710 aaKnown RBP21.29■■□□□ 1
LMNA-217ENST00000498722 ATG3Q9NT62 314 aa21.29■■□□□ 1
LMNA-217ENST00000498722 MRC1P22897 1456 aa21.29■■□□□ 1
LMNA-217ENST00000498722 HNRNPUQ00839 825 aaKnown RBP eCLIP21.29■■□□□ 1
LMNA-217ENST00000498722 TEFQ10587 303 aa21.29■■□□□ 1
LMNA-217ENST00000498722 RBM42Q9BTD8 480 aaKnown RBP21.29■■□□□ 1
LMNA-217ENST00000498722 QSER1Q2KHR3 1735 aa21.28■■□□□ 1
LMNA-217ENST00000498722 SLC15A2Q16348 729 aa21.28■■□□□ 1
LMNA-217ENST00000498722 CCDC146Q8IYE0 955 aa21.28■■□□□ 1
LMNA-217ENST00000498722 PLEKHF1Q96S99 279 aa21.28■■□□□ 1
LMNA-217ENST00000498722 C4BP0C0L5 1744 aa21.27■■□□□ 1
LMNA-217ENST00000498722 LOC102724428A0A0B4J2F2 783 aa21.27■□□□□ 0.99
LMNA-217ENST00000498722 SIK1P57059 783 aa21.27■□□□□ 0.99
LMNA-217ENST00000498722 ATP6V1AP38606 617 aa21.26■□□□□ 0.99
LMNA-217ENST00000498722 ZNF827Q17R98 1081 aa21.26■□□□□ 0.99
LMNA-217ENST00000498722 IL17REQ8NFR9 667 aa21.26■□□□□ 0.99
LMNA-217ENST00000498722 ZNF831Q5JPB2 1677 aa21.26■□□□□ 0.99
LMNA-217ENST00000498722 CASZ1Q86V15 1759 aa21.25■□□□□ 0.99
LMNA-217ENST00000498722 COL5A3P25940 1745 aaPredicted RBP21.25■□□□□ 0.99
LMNA-217ENST00000498722 UBR2Q8IWV8 1755 aa21.25■□□□□ 0.99
LMNA-217ENST00000498722 PTCD1O75127 700 aaKnown RBP21.25■□□□□ 0.99
LMNA-217ENST00000498722 MCM10Q7L590 875 aa21.25■□□□□ 0.99
LMNA-217ENST00000498722 ADAMTS8Q9UP79 889 aa21.25■□□□□ 0.99
LMNA-217ENST00000498722 SRCAPQ6ZRS2 3230 aa21.24■□□□□ 0.99
LMNA-217ENST00000498722 NFE2L2Q16236 605 aa21.24■□□□□ 0.99
LMNA-217ENST00000498722 TFCP2L1Q9NZI6 479 aa21.24■□□□□ 0.99
LMNA-217ENST00000498722 UBR3Q6ZT12 1888 aa21.23■□□□□ 0.99
LMNA-217ENST00000498722 HMGB2P26583 209 aaKnown RBP21.23■□□□□ 0.99
LMNA-217ENST00000498722 SLC39A6Q13433 755 aa21.23■□□□□ 0.99
LMNA-217ENST00000498722 DCTN1Q14203 1278 aa21.23■□□□□ 0.99
LMNA-217ENST00000498722 TJP1Q07157 1748 aa21.22■□□□□ 0.99
LMNA-217ENST00000498722 CEMIPQ8WUJ3 1361 aa21.21■□□□□ 0.99
LMNA-217ENST00000498722 TTC5Q8N0Z6 440 aa21.21■□□□□ 0.99
LMNA-217ENST00000498722 AKT1S1Q96B36 256 aa21.21■□□□□ 0.99
LMNA-217ENST00000498722 RUNDC1Q96C34 613 aa21.21■□□□□ 0.99
LMNA-217ENST00000498722 AK7Q96M32 723 aa21.21■□□□□ 0.99
LMNA-217ENST00000498722 HTATSF1O43719 755 aaKnown RBP21.2■□□□□ 0.98
LMNA-217ENST00000498722 NEUROD2Q15784 382 aa21.2■□□□□ 0.98
LMNA-217ENST00000498722 ZBED9Q6R2W3 1325 aa21.2■□□□□ 0.98
LMNA-217ENST00000498722 MYH14Q7Z406 1995 aaKnown RBP21.19■□□□□ 0.98
LMNA-217ENST00000498722 RIPK4P57078 832 aa21.19■□□□□ 0.98
LMNA-217ENST00000498722 ITPK1Q13572 414 aa21.19■□□□□ 0.98
LMNA-217ENST00000498722 LINC00116Q8NCU8 138 aa21.19■□□□□ 0.98
LMNA-217ENST00000498722 PDGFDQ9GZP0 370 aaPredicted RBP21.19■□□□□ 0.98
LMNA-217ENST00000498722 RRP7AQ9Y3A4 280 aaKnown RBP21.19■□□□□ 0.98
LMNA-217ENST00000498722 LRP5O75197 1615 aa21.19■□□□□ 0.98
LMNA-217ENST00000498722 MSH5O43196 834 aa21.18■□□□□ 0.98
LMNA-217ENST00000498722 KCPQ6ZWJ8 1503 aa21.17■□□□□ 0.98
LMNA-217ENST00000498722 CICQ96RK0 1608 aaPredicted RBP21.17■□□□□ 0.98
LMNA-217ENST00000498722 BTBD11A6QL63 1104 aa21.17■□□□□ 0.98
LMNA-217ENST00000498722 TMPOP42166 694 aaKnown RBP21.17■□□□□ 0.98
LMNA-217ENST00000498722 SLC4A9Q96Q91 983 aa21.17■□□□□ 0.98
LMNA-217ENST00000498722 THUMPD2Q9BTF0 503 aaKnown RBP21.16■□□□□ 0.98
LMNA-217ENST00000498722 KDM3BQ7LBC6 1761 aa21.15■□□□□ 0.98
LMNA-217ENST00000498722 ZBTB7AO95365 584 aa21.15■□□□□ 0.98
LMNA-217ENST00000498722 LMOD3Q0VAK6 560 aa21.15■□□□□ 0.98
LMNA-217ENST00000498722 ZNF790Q6PG37 636 aa21.15■□□□□ 0.98
LMNA-217ENST00000498722 PNPLA7Q6ZV29 1317 aa21.15■□□□□ 0.98
LMNA-217ENST00000498722 GNPATO15228 680 aa21.14■□□□□ 0.97
LMNA-217ENST00000498722 PHF14O94880 888 aa21.14■□□□□ 0.97
LMNA-217ENST00000498722 TAF7Q15545 349 aaPredicted RBP21.12■□□□□ 0.97
LMNA-217ENST00000498722 SPON1Q9HCB6 807 aa21.12■□□□□ 0.97
LMNA-217ENST00000498722 ATF5Q9Y2D1 282 aaPredicted RBP21.12■□□□□ 0.97
LMNA-217ENST00000498722 DNAJC10Q8IXB1 793 aa21.11■□□□□ 0.97
LMNA-217ENST00000498722 ZNF496Q96IT1 587 aaPredicted RBP21.11■□□□□ 0.97
LMNA-217ENST00000498722 MIS18AQ9NYP9 233 aa21.11■□□□□ 0.97
LMNA-217ENST00000498722 APAF1O14727 1248 aa21.1■□□□□ 0.97
LMNA-217ENST00000498722 KCNQ3O43525 872 aa21.1■□□□□ 0.97
LMNA-217ENST00000498722 C4AP0C0L4 1744 aa21.1■□□□□ 0.97
LMNA-217ENST00000498722 FLAD1Q8NFF5 587 aa21.1■□□□□ 0.97
LMNA-217ENST00000498722 FMNL2Q96PY5 1086 aa21.1■□□□□ 0.97
LMNA-217ENST00000498722 CNTNAP4Q9C0A0 1308 aa21.09■□□□□ 0.97
LMNA-217ENST00000498722 CRKLP46109 303 aaKnown RBP21.09■□□□□ 0.97
LMNA-217ENST00000498722 SMIM5Q71RC9 77 aa21.09■□□□□ 0.97
LMNA-217ENST00000498722 COL23A1Q86Y22 540 aaPredicted RBP21.09■□□□□ 0.97
LMNA-217ENST00000498722 RTCBQ9Y3I0 505 aaKnown RBP21.09■□□□□ 0.97
LMNA-217ENST00000498722 HEG1Q9ULI3 1381 aa21.08■□□□□ 0.97
LMNA-217ENST00000498722 SENP3-EIF4A1A0A087X0R7 540 aa21.08■□□□□ 0.97
LMNA-217ENST00000498722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.08■□□□□ 0.97
LMNA-217ENST00000498722 VSIG10Q8N0Z9 540 aa21.08■□□□□ 0.97
LMNA-217ENST00000498722 MTFR1LQ9H019 292 aa21.08■□□□□ 0.97
LMNA-217ENST00000498722 LAMB4A4D0S4 1761 aa21.08■□□□□ 0.97
LMNA-217ENST00000498722 SSFA2P28290 1259 aa21.07■□□□□ 0.96
LMNA-217ENST00000498722 RC3H1Q5TC82 1133 aaKnown RBP21.07■□□□□ 0.96
LMNA-217ENST00000498722 AMIGO3Q86WK7 504 aa21.07■□□□□ 0.96
LMNA-217ENST00000498722 PPP1R1BQ9UD71 204 aaPredicted RBP21.07■□□□□ 0.96
LMNA-217ENST00000498722 SLC16A10Q8TF71 515 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms