RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 PLEKHG1Q9ULL1 1385 aa8.05□□□□□ -1.12
NF1-217ENST00000498569 RPRD2Q5VT52 1461 aaKnown RBP8.05□□□□□ -1.12
NF1-217ENST00000498569 ZFYVE9O95405 1425 aa8.04□□□□□ -1.12
NF1-217ENST00000498569 RIMS2Q9UQ26 1411 aa8.04□□□□□ -1.12
NF1-217ENST00000498569 NCOA3Q9Y6Q9 1424 aa8.04□□□□□ -1.12
NF1-217ENST00000498569 NUTM2BA6NNL0 878 aaPredicted RBP8.04□□□□□ -1.12
NF1-217ENST00000498569 NUTM2EB1AL46 878 aaPredicted RBP8.04□□□□□ -1.12
NF1-217ENST00000498569 TERTO14746 1132 aaKnown RBP8.04□□□□□ -1.12
NF1-217ENST00000498569 MMP16P51512 607 aa8.04□□□□□ -1.12
NF1-217ENST00000498569 RBM26Q5T8P6 1007 aaKnown RBP8.04□□□□□ -1.12
NF1-217ENST00000498569 RNF19BQ6ZMZ0 732 aa8.04□□□□□ -1.12
NF1-217ENST00000498569 NUTM2AQ8IVF1 878 aaPredicted RBP8.04□□□□□ -1.12
NF1-217ENST00000498569 SLC52A1Q9NWF4 448 aa8.04□□□□□ -1.12
NF1-217ENST00000498569 ANKRD30AQ9BXX3 1397 aa8.04□□□□□ -1.12
NF1-217ENST00000498569 E9PCH4 1651 aa8.04□□□□□ -1.12
NF1-217ENST00000498569 ASXL1Q8IXJ9 1541 aa8.03□□□□□ -1.12
NF1-217ENST00000498569 TESPA1A2RU30 521 aaPredicted RBP8.03□□□□□ -1.12
NF1-217ENST00000498569 MRGPRX2Q96LB1 330 aa8.03□□□□□ -1.12
NF1-217ENST00000498569 NALCNQ8IZF0 1738 aa8.03□□□□□ -1.12
NF1-217ENST00000498569 XRN1Q8IZH2 1706 aaKnown RBP8.03□□□□□ -1.12
NF1-217ENST00000498569 RGS12O14924 1447 aa8.03□□□□□ -1.12
NF1-217ENST00000498569 AFF2P51816 1311 aa8.03□□□□□ -1.12
NF1-217ENST00000498569 UNC13BO14795 1591 aa8.02□□□□□ -1.13
NF1-217ENST00000498569 GPR37O15354 613 aa8.02□□□□□ -1.13
NF1-217ENST00000498569 MARF1Q9Y4F3 1742 aaKnown RBP8.02□□□□□ -1.13
NF1-217ENST00000498569 IQGAP3Q86VI3 1631 aa8.01□□□□□ -1.13
NF1-217ENST00000498569 FAM181BA6NEQ2 426 aa8.01□□□□□ -1.13
NF1-217ENST00000498569 SNRPBP14678 240 aaKnown RBP8.01□□□□□ -1.13
NF1-217ENST00000498569 KANK4Q5T7N3 995 aaPredicted RBP8.01□□□□□ -1.13
NF1-217ENST00000498569 NLRP7Q8WX94 980 aa8.01□□□□□ -1.13
NF1-217ENST00000498569 C19orf44Q9H6X5 657 aa8.01□□□□□ -1.13
NF1-217ENST00000498569 CHIC2Q9UKJ5 165 aa8.01□□□□□ -1.13
NF1-217ENST00000498569 SPHKAPQ2M3C7 1700 aa8□□□□□ -1.13
NF1-217ENST00000498569 J3QL48 77 aa8□□□□□ -1.13
NF1-217ENST00000498569 NUTM2DQ5VT03 806 aaPredicted RBP8□□□□□ -1.13
NF1-217ENST00000498569 DCCP43146 1447 aa8□□□□□ -1.13
NF1-217ENST00000498569 ADGRL2O95490 1459 aa8□□□□□ -1.13
NF1-217ENST00000498569 NRXN3Q9Y4C0 1643 aa8□□□□□ -1.13
NF1-217ENST00000498569 ATAD2Q6PL18 1390 aa7.99□□□□□ -1.13
NF1-217ENST00000498569 PIK3R4Q99570 1358 aa7.99□□□□□ -1.13
NF1-217ENST00000498569 DXOO77932 396 aaKnown RBP7.99□□□□□ -1.13
NF1-217ENST00000498569 WNT7BP56706 349 aa7.99□□□□□ -1.13
NF1-217ENST00000498569 ADAMTS13Q76LX8 1427 aa7.99□□□□□ -1.13
NF1-217ENST00000498569 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.99□□□□□ -1.13
NF1-217ENST00000498569 SLC16A10Q8TF71 515 aa7.99□□□□□ -1.13
NF1-217ENST00000498569 C8orf37Q96NL8 207 aa7.99□□□□□ -1.13
NF1-217ENST00000498569 USB1Q9BQ65 265 aaKnown RBP7.99□□□□□ -1.13
NF1-217ENST00000498569 TBX22Q9Y458 520 aa7.99□□□□□ -1.13
NF1-217ENST00000498569 SETD5Q9C0A6 1442 aa7.98□□□□□ -1.13
NF1-217ENST00000498569 RBM6P78332 1123 aaKnown RBP7.98□□□□□ -1.13
NF1-217ENST00000498569 BRINP3Q76B58 766 aa7.98□□□□□ -1.13
NF1-217ENST00000498569 HPS1Q92902 700 aa7.98□□□□□ -1.13
NF1-217ENST00000498569 KIF1BO60333 1816 aa7.98□□□□□ -1.13
NF1-217ENST00000498569 MST1RQ04912 1400 aa7.97□□□□□ -1.13
NF1-217ENST00000498569 ANKRD50Q9ULJ7 1429 aa7.97□□□□□ -1.13
NF1-217ENST00000498569 USP46P62068 366 aa7.97□□□□□ -1.13
NF1-217ENST00000498569 NGLY1Q96IV0 654 aa7.97□□□□□ -1.13
NF1-217ENST00000498569 PHOX2BQ99453 314 aa7.97□□□□□ -1.13
NF1-217ENST00000498569 QTRT2Q9H974 415 aaKnown RBP7.97□□□□□ -1.13
NF1-217ENST00000498569 SETBP1Q9Y6X0 1596 aa7.97□□□□□ -1.13
NF1-217ENST00000498569 LAMC1P11047 1609 aa7.96□□□□□ -1.13
NF1-217ENST00000498569 KDM4AO75164 1064 aa7.96□□□□□ -1.14
NF1-217ENST00000498569 CD46P15529 392 aa7.96□□□□□ -1.14
NF1-217ENST00000498569 RC3H1Q5TC82 1133 aaKnown RBP7.96□□□□□ -1.14
NF1-217ENST00000498569 GPIHBP1Q8IV16 184 aa7.96□□□□□ -1.14
NF1-217ENST00000498569 CCDC24Q8N4L8 307 aa7.96□□□□□ -1.14
NF1-217ENST00000498569 LRRC59Q96AG4 307 aaKnown RBP7.96□□□□□ -1.14
NF1-217ENST00000498569 COL22A1Q8NFW1 1626 aaPredicted RBP7.96□□□□□ -1.14
NF1-217ENST00000498569 BRWD3Q6RI45 1802 aa7.95□□□□□ -1.14
NF1-217ENST00000498569 LCE2CQ5TA81 110 aa7.95□□□□□ -1.14
NF1-217ENST00000498569 AMOTL2Q9Y2J4 779 aa7.95□□□□□ -1.14
NF1-217ENST00000498569 PNPLA6Q8IY17 1366 aa7.95□□□□□ -1.14
NF1-217ENST00000498569 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.95□□□□□ -1.14
NF1-217ENST00000498569 PTPRUQ92729 1446 aa7.95□□□□□ -1.14
NF1-217ENST00000498569 ADGRL3Q9HAR2 1447 aa7.95□□□□□ -1.14
NF1-217ENST00000498569 ADAMTS2O95450 1211 aa7.94□□□□□ -1.14
NF1-217ENST00000498569 FAM50AQ14320 339 aaKnown RBP7.93□□□□□ -1.14
NF1-217ENST00000498569 NPAS3Q8IXF0 933 aa7.93□□□□□ -1.14
NF1-217ENST00000498569 NXF1Q9UBU9 619 aaKnown RBP7.93□□□□□ -1.14
NF1-217ENST00000498569 ALDH1A1P00352 501 aa7.92□□□□□ -1.14
NF1-217ENST00000498569 SKOR1P84550 965 aa7.92□□□□□ -1.14
NF1-217ENST00000498569 DDX17Q92841 729 aaKnown RBP7.92□□□□□ -1.14
NF1-217ENST00000498569 IRF7Q92985 503 aa7.92□□□□□ -1.14
NF1-217ENST00000498569 USP21Q9UK80 565 aa7.92□□□□□ -1.14
NF1-217ENST00000498569 PTCH1Q13635 1447 aa7.92□□□□□ -1.14
NF1-217ENST00000498569 LRP5O75197 1615 aa7.92□□□□□ -1.14
NF1-217ENST00000498569 JUNDP17535 347 aa7.91□□□□□ -1.14
NF1-217ENST00000498569 TRPC5Q9UL62 973 aaPredicted RBP7.91□□□□□ -1.14
NF1-217ENST00000498569 CLTCL1P53675 1640 aa7.9□□□□□ -1.14
NF1-217ENST00000498569 ATRNO75882 1429 aa7.9□□□□□ -1.14
NF1-217ENST00000498569 ZNF326Q5BKZ1 582 aaKnown RBP7.9□□□□□ -1.14
NF1-217ENST00000498569 WASF2Q9Y6W5 498 aa7.9□□□□□ -1.14
NF1-217ENST00000498569 NEXMIFQ5QGS0 1516 aa7.89□□□□□ -1.15
NF1-217ENST00000498569 C1orf167Q5SNV9 1468 aa7.89□□□□□ -1.15
NF1-217ENST00000498569 HOXA2O43364 376 aa7.89□□□□□ -1.15
NF1-217ENST00000498569 MAP2K5Q13163 448 aa7.89□□□□□ -1.15
NF1-217ENST00000498569 EHBP1Q8NDI1 1231 aa7.89□□□□□ -1.15
NF1-217ENST00000498569 PLCH1Q4KWH8 1693 aa7.89□□□□□ -1.15
NF1-217ENST00000498569 METP08581 1390 aa7.88□□□□□ -1.15
NF1-217ENST00000498569 LOC105371045A0A1W2PR82 267 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms