RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 AK7Q96M32 723 aa13.77□□□□□ -0.2
PBX1-211ENST00000498497 SH3BP1Q9Y3L3 701 aa13.77□□□□□ -0.2
PBX1-211ENST00000498497 ANKRD36BQ8N2N9 1353 aa13.77□□□□□ -0.2
PBX1-211ENST00000498497 SASH3O75995 380 aa13.77□□□□□ -0.21
PBX1-211ENST00000498497 MAP2K1Q02750 393 aaPredicted RBP13.77□□□□□ -0.21
PBX1-211ENST00000498497 ATF7IPQ6VMQ6 1270 aa13.77□□□□□ -0.21
PBX1-211ENST00000498497 PRDM2Q13029 1718 aa13.77□□□□□ -0.21
PBX1-211ENST00000498497 BRD1O95696 1058 aa13.77□□□□□ -0.21
PBX1-211ENST00000498497 ADAM21Q9UKJ8 722 aa13.77□□□□□ -0.21
PBX1-211ENST00000498497 FBXW10Q5XX13 1052 aa13.76□□□□□ -0.21
PBX1-211ENST00000498497 JPH2Q9BR39 696 aaPredicted RBP13.76□□□□□ -0.21
PBX1-211ENST00000498497 ZNF608Q9ULD9 1512 aaPredicted RBP13.76□□□□□ -0.21
PBX1-211ENST00000498497 INSRP06213 1382 aa13.76□□□□□ -0.21
PBX1-211ENST00000498497 U2AF1L5P0DN76 240 aaPredicted RBP13.76□□□□□ -0.21
PBX1-211ENST00000498497 U2AF1Q01081 240 aaKnown RBP eCLIP13.76□□□□□ -0.21
PBX1-211ENST00000498497 DNM1Q05193 864 aaKnown RBP13.76□□□□□ -0.21
PBX1-211ENST00000498497 WWC2Q6AWC2 1192 aa13.76□□□□□ -0.21
PBX1-211ENST00000498497 FBXO18Q8NFZ0 1043 aa13.76□□□□□ -0.21
PBX1-211ENST00000498497 DNAJC25Q9H1X3 360 aa13.76□□□□□ -0.21
PBX1-211ENST00000498497 ERBB3P21860 1342 aa13.76□□□□□ -0.21
PBX1-211ENST00000498497 POLR1AO95602 1720 aaPredicted RBP13.75□□□□□ -0.21
PBX1-211ENST00000498497 URI1O94763 535 aaPredicted RBP13.75□□□□□ -0.21
PBX1-211ENST00000498497 CCDC192P0DO97 292 aa13.75□□□□□ -0.21
PBX1-211ENST00000498497 TESK2Q96S53 571 aa13.75□□□□□ -0.21
PBX1-211ENST00000498497 PTPN21Q16825 1174 aa13.75□□□□□ -0.21
PBX1-211ENST00000498497 NUP155O75694 1391 aa13.75□□□□□ -0.21
PBX1-211ENST00000498497 MPHOSPH10O00566 681 aaKnown RBP13.75□□□□□ -0.21
PBX1-211ENST00000498497 SKAP2O75563 359 aaPredicted RBP13.75□□□□□ -0.21
PBX1-211ENST00000498497 ANO2Q9NQ90 1003 aa13.75□□□□□ -0.21
PBX1-211ENST00000498497 PALD1Q9ULE6 856 aa13.75□□□□□ -0.21
PBX1-211ENST00000498497 FANCD2Q9BXW9 1451 aa13.74□□□□□ -0.21
PBX1-211ENST00000498497 MUM1L1Q5H9M0 696 aa13.74□□□□□ -0.21
PBX1-211ENST00000498497 MCTP2Q6DN12 878 aa13.74□□□□□ -0.21
PBX1-211ENST00000498497 DNAI1Q9UI46 699 aa13.74□□□□□ -0.21
PBX1-211ENST00000498497 FAM135AQ9P2D6 1515 aa13.74□□□□□ -0.21
PBX1-211ENST00000498497 HECW1Q76N89 1606 aa13.74□□□□□ -0.21
PBX1-211ENST00000498497 ERCC4Q92889 916 aaPredicted RBP13.74□□□□□ -0.21
PBX1-211ENST00000498497 ARGLU1Q9NWB6 273 aaPredicted RBP13.74□□□□□ -0.21
PBX1-211ENST00000498497 TPM3P06753 285 aa13.73□□□□□ -0.21
PBX1-211ENST00000498497 MAGEA9P43362 315 aa13.73□□□□□ -0.21
PBX1-211ENST00000498497 RBM5P52756 815 aaKnown RBP eCLIP13.73□□□□□ -0.21
PBX1-211ENST00000498497 ZBTB40Q9NUA8 1239 aa13.73□□□□□ -0.21
PBX1-211ENST00000498497 MIS18AQ9NYP9 233 aa13.73□□□□□ -0.21
PBX1-211ENST00000498497 ANKRD30AQ9BXX3 1397 aa13.73□□□□□ -0.21
PBX1-211ENST00000498497 PAX7P23759 505 aa13.73□□□□□ -0.21
PBX1-211ENST00000498497 PPARDQ03181 441 aa13.73□□□□□ -0.21
PBX1-211ENST00000498497 GOLGA5Q8TBA6 731 aa13.73□□□□□ -0.21
PBX1-211ENST00000498497 CARD6Q9BX69 1037 aa13.73□□□□□ -0.21
PBX1-211ENST00000498497 CBX8Q9HC52 389 aa13.73□□□□□ -0.21
PBX1-211ENST00000498497 SCAPERQ9BY12 1400 aa13.73□□□□□ -0.21
PBX1-211ENST00000498497 SNW1Q13573 536 aaKnown RBP13.73□□□□□ -0.21
PBX1-211ENST00000498497 SYCP1Q15431 976 aa13.73□□□□□ -0.21
PBX1-211ENST00000498497 CCDC69A6NI79 296 aa13.72□□□□□ -0.21
PBX1-211ENST00000498497 N4BP1O75113 896 aaKnown RBP13.72□□□□□ -0.21
PBX1-211ENST00000498497 GRIPAP1Q4V328 841 aa13.72□□□□□ -0.21
PBX1-211ENST00000498497 REXO1L1PQ8IX06 675 aa13.72□□□□□ -0.21
PBX1-211ENST00000498497 ACTN2P35609 894 aa13.72□□□□□ -0.21
PBX1-211ENST00000498497 TYRO3Q06418 890 aa13.72□□□□□ -0.21
PBX1-211ENST00000498497 FMNL2Q96PY5 1086 aa13.72□□□□□ -0.21
PBX1-211ENST00000498497 TOP2BQ02880 1626 aa13.71□□□□□ -0.21
PBX1-211ENST00000498497 H3BQF6 201 aa13.71□□□□□ -0.21
PBX1-211ENST00000498497 CT47B1P0C2W7 299 aaPredicted RBP13.71□□□□□ -0.21
PBX1-211ENST00000498497 SDSP20132 328 aa13.71□□□□□ -0.21
PBX1-211ENST00000498497 INTS3Q68E01 1043 aaKnown RBP13.71□□□□□ -0.21
PBX1-211ENST00000498497 GIMAP7Q8NHV1 300 aa13.71□□□□□ -0.21
PBX1-211ENST00000498497 CCDC189A1A4V9 331 aa13.71□□□□□ -0.21
PBX1-211ENST00000498497 GOLGA6L4A6NEF3 574 aa13.71□□□□□ -0.21
PBX1-211ENST00000498497 H0YHG0 523 aa13.71□□□□□ -0.21
PBX1-211ENST00000498497 PEX19P40855 299 aa13.71□□□□□ -0.21
PBX1-211ENST00000498497 MCM2P49736 904 aa13.71□□□□□ -0.21
PBX1-211ENST00000498497 ZNF75DP51815 510 aa13.71□□□□□ -0.21
PBX1-211ENST00000498497 SARNPP82979 210 aaKnown RBP13.71□□□□□ -0.21
PBX1-211ENST00000498497 HOMEZQ8IX15 550 aa13.71□□□□□ -0.21
PBX1-211ENST00000498497 PLCD4Q9BRC7 762 aa13.71□□□□□ -0.21
PBX1-211ENST00000498497 CASKIN1Q8WXD9 1431 aa13.71□□□□□ -0.22
PBX1-211ENST00000498497 TCHHQ07283 1943 aa13.71□□□□□ -0.22
PBX1-211ENST00000498497 CPA1P15085 419 aa13.7□□□□□ -0.22
PBX1-211ENST00000498497 FAM200AQ8TCP9 573 aa13.7□□□□□ -0.22
PBX1-211ENST00000498497 CENPHQ9H3R5 247 aa13.7□□□□□ -0.22
PBX1-211ENST00000498497 TFIP11Q9UBB9 837 aaKnown RBP13.7□□□□□ -0.22
PBX1-211ENST00000498497 TAOK2Q9UL54 1235 aa13.7□□□□□ -0.22
PBX1-211ENST00000498497 H2AFXP16104 143 aaPredicted RBP13.7□□□□□ -0.22
PBX1-211ENST00000498497 LIG1P18858 919 aa13.7□□□□□ -0.22
PBX1-211ENST00000498497 CEBPZQ03701 1054 aaKnown RBP13.7□□□□□ -0.22
PBX1-211ENST00000498497 CASC1Q6TDU7 716 aa13.7□□□□□ -0.22
PBX1-211ENST00000498497 PPM1EQ8WY54 764 aa13.7□□□□□ -0.22
PBX1-211ENST00000498497 CCDC102AQ96A19 550 aa13.7□□□□□ -0.22
PBX1-211ENST00000498497 CCDC30Q5VVM6 783 aa13.7□□□□□ -0.22
PBX1-211ENST00000498497 ZNF513Q8N8E2 541 aaPredicted RBP13.7□□□□□ -0.22
PBX1-211ENST00000498497 RILPL2Q969X0 211 aa13.7□□□□□ -0.22
PBX1-211ENST00000498497 SUGCTQ9HAC7 445 aa13.7□□□□□ -0.22
PBX1-211ENST00000498497 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.7□□□□□ -0.22
PBX1-211ENST00000498497 CFAP43Q8NDM7 1665 aa13.7□□□□□ -0.22
PBX1-211ENST00000498497 PLEKHG2Q9H7P9 1386 aa13.7□□□□□ -0.22
PBX1-211ENST00000498497 ZNF165P49910 485 aa13.69□□□□□ -0.22
PBX1-211ENST00000498497 FAM53CQ9NYF3 392 aa13.69□□□□□ -0.22
PBX1-211ENST00000498497 GOLGA6L19H0YKK7 550 aa13.69□□□□□ -0.22
PBX1-211ENST00000498497 TNMDQ9H2S6 317 aa13.69□□□□□ -0.22
PBX1-211ENST00000498497 PDE11AQ9HCR9 933 aa13.69□□□□□ -0.22
PBX1-211ENST00000498497 IRAK4Q9NWZ3 460 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms