RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 COL3A1P02461 1466 aaPredicted RBP13.4□□□□□ -0.26
TSPAN1-209ENST00000498443 U2SURPO15042 1029 aaKnown RBP13.39□□□□□ -0.27
TSPAN1-209ENST00000498443 RAPGEF4Q8WZA2 1011 aa13.39□□□□□ -0.27
TSPAN1-209ENST00000498443 DIAPH1O60610 1272 aaKnown RBP13.38□□□□□ -0.27
TSPAN1-209ENST00000498443 NCAPD2Q15021 1401 aa13.38□□□□□ -0.27
TSPAN1-209ENST00000498443 MYBBP1AQ9BQG0 1328 aaKnown RBP13.38□□□□□ -0.27
TSPAN1-209ENST00000498443 QSER1Q2KHR3 1735 aa13.37□□□□□ -0.27
TSPAN1-209ENST00000498443 PRIM1P49642 420 aaKnown RBP13.36□□□□□ -0.27
TSPAN1-209ENST00000498443 SLC27A3Q5K4L6 730 aa13.36□□□□□ -0.27
TSPAN1-209ENST00000498443 TSHZ2Q9NRE2 1034 aa13.36□□□□□ -0.27
TSPAN1-209ENST00000498443 PPP4R2Q9NY27 417 aa13.36□□□□□ -0.27
TSPAN1-209ENST00000498443 PHACTR3Q96KR7 559 aa13.35□□□□□ -0.27
TSPAN1-209ENST00000498443 COL24A1Q17RW2 1714 aa13.34□□□□□ -0.27
TSPAN1-209ENST00000498443 COL23A1Q86Y22 540 aaPredicted RBP13.34□□□□□ -0.27
TSPAN1-209ENST00000498443 CCNL1Q9UK58 526 aaPredicted RBP13.34□□□□□ -0.27
TSPAN1-209ENST00000498443 MTHFSDQ2M296 383 aaKnown RBP13.33□□□□□ -0.28
TSPAN1-209ENST00000498443 U2AF1L5P0DN76 240 aaPredicted RBP13.32□□□□□ -0.28
TSPAN1-209ENST00000498443 PHKG2P15735 406 aa13.32□□□□□ -0.28
TSPAN1-209ENST00000498443 U2AF1Q01081 240 aaKnown RBP eCLIP13.32□□□□□ -0.28
TSPAN1-209ENST00000498443 ZNF530Q6P9A1 599 aaPredicted RBP13.32□□□□□ -0.28
TSPAN1-209ENST00000498443 PNISRQ8TF01 805 aaKnown RBP13.32□□□□□ -0.28
TSPAN1-209ENST00000498443 DOT1LQ8TEK3 1739 aa13.32□□□□□ -0.28
TSPAN1-209ENST00000498443 PRKAR2BP31323 418 aa13.31□□□□□ -0.28
TSPAN1-209ENST00000498443 MPRIPQ6WCQ1 1025 aa13.31□□□□□ -0.28
TSPAN1-209ENST00000498443 LGR6Q9HBX8 967 aa13.31□□□□□ -0.28
TSPAN1-209ENST00000498443 NUDCQ9Y266 331 aa13.31□□□□□ -0.28
TSPAN1-209ENST00000498443 ADCY9O60503 1353 aa13.31□□□□□ -0.28
TSPAN1-209ENST00000498443 APLP1P51693 650 aa13.3□□□□□ -0.28
TSPAN1-209ENST00000498443 RSPH6AQ9H0K4 717 aa13.3□□□□□ -0.28
TSPAN1-209ENST00000498443 SPG7Q9UQ90 795 aa13.3□□□□□ -0.28
TSPAN1-209ENST00000498443 KDRP35968 1356 aa13.3□□□□□ -0.28
TSPAN1-209ENST00000498443 KIF3CO14782 793 aa13.29□□□□□ -0.28
TSPAN1-209ENST00000498443 PLEKHO1Q53GL0 409 aaPredicted RBP13.29□□□□□ -0.28
TSPAN1-209ENST00000498443 PIGBQ92521 554 aa13.29□□□□□ -0.28
TSPAN1-209ENST00000498443 CFAP53Q96M91 514 aa13.29□□□□□ -0.28
TSPAN1-209ENST00000498443 PKD1L3Q7Z443 1732 aa13.29□□□□□ -0.28
TSPAN1-209ENST00000498443 TOGARAM1Q9Y4F4 1720 aa13.29□□□□□ -0.28
TSPAN1-209ENST00000498443 PCDH11XQ9BZA7 1347 aa13.29□□□□□ -0.28
TSPAN1-209ENST00000498443 PCDH11YQ9BZA8 1340 aa13.29□□□□□ -0.28
TSPAN1-209ENST00000498443 LY75O60449 1722 aa13.28□□□□□ -0.28
TSPAN1-209ENST00000498443 SMIM5Q71RC9 77 aa13.28□□□□□ -0.28
TSPAN1-209ENST00000498443 CD2APQ9Y5K6 639 aa13.28□□□□□ -0.28
TSPAN1-209ENST00000498443 KDM6AO15550 1401 aaPredicted RBP13.28□□□□□ -0.28
TSPAN1-209ENST00000498443 HTRA3P83110 453 aa13.27□□□□□ -0.29
TSPAN1-209ENST00000498443 DCTN1Q14203 1278 aa13.27□□□□□ -0.29
TSPAN1-209ENST00000498443 NKX1-1Q15270 411 aaPredicted RBP13.27□□□□□ -0.29
TSPAN1-209ENST00000498443 COL13A1Q5TAT6 717 aaPredicted RBP13.27□□□□□ -0.29
TSPAN1-209ENST00000498443 CCDC146Q8IYE0 955 aa13.27□□□□□ -0.29
TSPAN1-209ENST00000498443 IFNL2Q8IZJ0 200 aa13.27□□□□□ -0.29
TSPAN1-209ENST00000498443 PHF14O94880 888 aa13.26□□□□□ -0.29
TSPAN1-209ENST00000498443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.29
TSPAN1-209ENST00000498443 ASAP1Q9ULH1 1129 aa13.26□□□□□ -0.29
TSPAN1-209ENST00000498443 IL17REQ8NFR9 667 aa13.25□□□□□ -0.29
TSPAN1-209ENST00000498443 PLEKHF1Q96S99 279 aa13.25□□□□□ -0.29
TSPAN1-209ENST00000498443 TNS4Q8IZW8 715 aa13.24□□□□□ -0.29
TSPAN1-209ENST00000498443 NFATC2IPQ8NCF5 419 aa13.24□□□□□ -0.29
TSPAN1-209ENST00000498443 THUMPD2Q9BTF0 503 aaKnown RBP13.24□□□□□ -0.29
TSPAN1-209ENST00000498443 ADAMTS8Q9UP79 889 aa13.24□□□□□ -0.29
TSPAN1-209ENST00000498443 RRP7AQ9Y3A4 280 aaKnown RBP13.24□□□□□ -0.29
TSPAN1-209ENST00000498443 C5P01031 1676 aa13.24□□□□□ -0.29
TSPAN1-209ENST00000498443 ITGB4P16144 1822 aa13.23□□□□□ -0.29
TSPAN1-209ENST00000498443 RNF123Q5XPI4 1314 aa13.23□□□□□ -0.29
TSPAN1-209ENST00000498443 RNMTO43148 476 aaKnown RBP13.23□□□□□ -0.29
TSPAN1-209ENST00000498443 SLC39A6Q13433 755 aa13.23□□□□□ -0.29
TSPAN1-209ENST00000498443 AMOTQ4VCS5 1084 aa13.23□□□□□ -0.29
TSPAN1-209ENST00000498443 DNAJC5GQ8N7S2 189 aa13.23□□□□□ -0.29
TSPAN1-209ENST00000498443 ATG3Q9NT62 314 aa13.23□□□□□ -0.29
TSPAN1-209ENST00000498443 KCNQ3O43525 872 aa13.22□□□□□ -0.29
TSPAN1-209ENST00000498443 TOMM70O94826 608 aa13.22□□□□□ -0.29
TSPAN1-209ENST00000498443 C1orf141Q5JVX7 400 aa13.22□□□□□ -0.29
TSPAN1-209ENST00000498443 MCM10Q7L590 875 aa13.22□□□□□ -0.29
TSPAN1-209ENST00000498443 AK7Q96M32 723 aa13.22□□□□□ -0.29
TSPAN1-209ENST00000498443 SLC4A9Q96Q91 983 aa13.22□□□□□ -0.29
TSPAN1-209ENST00000498443 WDR90Q96KV7 1748 aa13.22□□□□□ -0.29
TSPAN1-209ENST00000498443 FCHSD2O94868 740 aa13.21□□□□□ -0.29
TSPAN1-209ENST00000498443 CABP4P57796 275 aa13.21□□□□□ -0.29
TSPAN1-209ENST00000498443 AKAP4Q5JQC9 854 aa13.21□□□□□ -0.29
TSPAN1-209ENST00000498443 AMIGO3Q86WK7 504 aa13.21□□□□□ -0.29
TSPAN1-209ENST00000498443 DCAF5Q96JK2 942 aa13.21□□□□□ -0.29
TSPAN1-209ENST00000498443 NMRK2Q9NPI5 230 aa13.21□□□□□ -0.29
TSPAN1-209ENST00000498443 TMOD3Q9NYL9 352 aa13.21□□□□□ -0.29
TSPAN1-209ENST00000498443 C16orf71Q8IYS4 520 aaPredicted RBP13.2□□□□□ -0.3
TSPAN1-209ENST00000498443 FLAD1Q8NFF5 587 aa13.2□□□□□ -0.3
TSPAN1-209ENST00000498443 MIS18AQ9NYP9 233 aa13.2□□□□□ -0.3
TSPAN1-209ENST00000498443 ITPK1Q13572 414 aa13.19□□□□□ -0.3
TSPAN1-209ENST00000498443 NEUROD2Q15784 382 aa13.19□□□□□ -0.3
TSPAN1-209ENST00000498443 BCS1LQ9Y276 419 aa13.19□□□□□ -0.3
TSPAN1-209ENST00000498443 GNAT3A8MTJ3 354 aa13.18□□□□□ -0.3
TSPAN1-209ENST00000498443 PTCD1O75127 700 aaKnown RBP13.18□□□□□ -0.3
TSPAN1-209ENST00000498443 ARHGAP27Q6ZUM4 889 aa13.18□□□□□ -0.3
TSPAN1-209ENST00000498443 KLRG1Q96E93 195 aa13.18□□□□□ -0.3
TSPAN1-209ENST00000498443 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
TSPAN1-209ENST00000498443 RBM19Q9Y4C8 960 aaKnown RBP13.18□□□□□ -0.3
TSPAN1-209ENST00000498443 PALLDQ8WX93 1383 aa13.18□□□□□ -0.3
TSPAN1-209ENST00000498443 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.17□□□□□ -0.3
TSPAN1-209ENST00000498443 ERVV-2B6SEH9 535 aa13.17□□□□□ -0.3
TSPAN1-209ENST00000498443 SLC52A2Q9HAB3 445 aa13.17□□□□□ -0.3
TSPAN1-209ENST00000498443 C4BP0C0L5 1744 aa13.16□□□□□ -0.3
TSPAN1-209ENST00000498443 TAF1LQ8IZX4 1826 aa13.16□□□□□ -0.3
TSPAN1-209ENST00000498443 PRELPP51888 382 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms