RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 CNKSR1Q969H4 720 aa8.48□□□□□ -1.05
PTPRK-215ENST00000498284 PURBQ96QR8 312 aaKnown RBP8.48□□□□□ -1.05
PTPRK-215ENST00000498284 ARXQ96QS3 562 aa8.48□□□□□ -1.05
PTPRK-215ENST00000498284 INSM2Q96T92 566 aaPredicted RBP8.48□□□□□ -1.05
PTPRK-215ENST00000498284 ESYT1Q9BSJ8 1104 aa8.48□□□□□ -1.05
PTPRK-215ENST00000498284 ZNF358Q9NW07 568 aa8.48□□□□□ -1.05
PTPRK-215ENST00000498284 DACH1Q9UI36 760 aa8.48□□□□□ -1.05
PTPRK-215ENST00000498284 ZMIZ1Q9ULJ6 1067 aa8.48□□□□□ -1.05
PTPRK-215ENST00000498284 SFI1A8K8P3 1242 aa8.47□□□□□ -1.05
PTPRK-215ENST00000498284 SEC13P55735 322 aa8.47□□□□□ -1.05
PTPRK-215ENST00000498284 NLRP3Q96P20 1036 aa8.47□□□□□ -1.05
PTPRK-215ENST00000498284 ATP13A2Q9NQ11 1180 aa8.47□□□□□ -1.05
PTPRK-215ENST00000498284 SERTAD1Q9UHV2 236 aa8.47□□□□□ -1.05
PTPRK-215ENST00000498284 CSB-PGBD3P0DP91 1061 aa8.46□□□□□ -1.06
PTPRK-215ENST00000498284 STK32AQ8WU08 396 aa8.46□□□□□ -1.06
PTPRK-215ENST00000498284 HRH3Q9Y5N1 445 aa8.46□□□□□ -1.06
PTPRK-215ENST00000498284 M0R2N6 131 aa8.45□□□□□ -1.06
PTPRK-215ENST00000498284 BACH1O14867 736 aa8.45□□□□□ -1.06
PTPRK-215ENST00000498284 ZFP42Q96MM3 310 aa8.45□□□□□ -1.06
PTPRK-215ENST00000498284 SLC4A9Q96Q91 983 aa8.45□□□□□ -1.06
PTPRK-215ENST00000498284 POLMQ9NP87 494 aaPredicted RBP8.45□□□□□ -1.06
PTPRK-215ENST00000498284 CTSOP43234 321 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-215ENST00000498284 CENPCQ03188 943 aa8.44□□□□□ -1.06
PTPRK-215ENST00000498284 TMEM164Q5U3C3 297 aa8.44□□□□□ -1.06
PTPRK-215ENST00000498284 RETREG2Q8NC44 543 aa8.44□□□□□ -1.06
PTPRK-215ENST00000498284 GPC1P35052 558 aa8.43□□□□□ -1.06
PTPRK-215ENST00000498284 RNF144AP50876 292 aaPredicted RBP8.43□□□□□ -1.06
PTPRK-215ENST00000498284 SMTNP53814 917 aa8.43□□□□□ -1.06
PTPRK-215ENST00000498284 TLR1Q15399 786 aa8.43□□□□□ -1.06
PTPRK-215ENST00000498284 TSEN2Q8NCE0 465 aaKnown RBP8.43□□□□□ -1.06
PTPRK-215ENST00000498284 TTLL8A6PVC2 850 aa8.42□□□□□ -1.06
PTPRK-215ENST00000498284 LCE2AQ5TA79 106 aaPredicted RBP8.42□□□□□ -1.06
PTPRK-215ENST00000498284 FOXD4L5Q5VV16 416 aaPredicted RBP8.42□□□□□ -1.06
PTPRK-215ENST00000498284 TNS4Q8IZW8 715 aa8.42□□□□□ -1.06
PTPRK-215ENST00000498284 HINFPQ9BQA5 517 aa8.42□□□□□ -1.06
PTPRK-215ENST00000498284 FHDC1Q9C0D6 1143 aaPredicted RBP8.42□□□□□ -1.06
PTPRK-215ENST00000498284 SOS2Q07890 1332 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-215ENST00000498284 A6NJY4 79 aa8.41□□□□□ -1.06
PTPRK-215ENST00000498284 EPHA4P54764 986 aa8.41□□□□□ -1.06
PTPRK-215ENST00000498284 FAM69CQ0P6D2 419 aa8.41□□□□□ -1.06
PTPRK-215ENST00000498284 SLC27A3Q5K4L6 730 aa8.41□□□□□ -1.06
PTPRK-215ENST00000498284 ZSCAN10Q96SZ4 725 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-215ENST00000498284 GRIP2Q9C0E4 1043 aa8.41□□□□□ -1.06
PTPRK-215ENST00000498284 TMEM88BA6NKF7 163 aa8.4□□□□□ -1.06
PTPRK-215ENST00000498284 MTFR1Q15390 333 aa8.4□□□□□ -1.06
PTPRK-215ENST00000498284 SWI5Q1ZZU3 235 aa8.4□□□□□ -1.06
PTPRK-215ENST00000498284 RNF217Q8TC41 542 aa8.4□□□□□ -1.06
PTPRK-215ENST00000498284 SENP2Q9HC62 589 aa8.4□□□□□ -1.06
PTPRK-215ENST00000498284 SCHIP1Q9P0W5 487 aaPredicted RBP8.4□□□□□ -1.06
PTPRK-215ENST00000498284 GMPR2Q9P2T1 348 aaKnown RBP8.4□□□□□ -1.06
PTPRK-215ENST00000498284 USTQ9Y2C2 406 aa8.4□□□□□ -1.06
PTPRK-215ENST00000498284 FIGNL2A6NMB9 653 aa8.39□□□□□ -1.07
PTPRK-215ENST00000498284 CDK2AP1O14519 115 aa8.39□□□□□ -1.07
PTPRK-215ENST00000498284 LGR5O75473 907 aa8.39□□□□□ -1.07
PTPRK-215ENST00000498284 CARNS1A5YM72 827 aa8.38□□□□□ -1.07
PTPRK-215ENST00000498284 GTF2E1P29083 439 aaPredicted RBP8.38□□□□□ -1.07
PTPRK-215ENST00000498284 FOXK2Q01167 660 aa8.38□□□□□ -1.07
PTPRK-215ENST00000498284 PDE4CQ08493 712 aa8.38□□□□□ -1.07
PTPRK-215ENST00000498284 TMEM214Q6NUQ4 689 aaKnown RBP8.38□□□□□ -1.07
PTPRK-215ENST00000498284 PPARGC1BQ86YN6 1023 aaKnown RBP8.38□□□□□ -1.07
PTPRK-215ENST00000498284 KIFC2Q96AC6 838 aa8.38□□□□□ -1.07
PTPRK-215ENST00000498284 IQSEC3Q9UPP2 1182 aaPredicted RBP8.38□□□□□ -1.07
PTPRK-215ENST00000498284 MAN1A2O60476 641 aa8.37□□□□□ -1.07
PTPRK-215ENST00000498284 LYSMD3Q7Z3D4 306 aa8.37□□□□□ -1.07
PTPRK-215ENST00000498284 PRICKLE2Q7Z3G6 844 aa8.37□□□□□ -1.07
PTPRK-215ENST00000498284 SLC9A9Q8IVB4 645 aa8.37□□□□□ -1.07
PTPRK-215ENST00000498284 CLP1Q92989 425 aaKnown RBP8.37□□□□□ -1.07
PTPRK-215ENST00000498284 TRIM47Q96LD4 638 aa8.37□□□□□ -1.07
PTPRK-215ENST00000498284 TSPAN10Q9H1Z9 355 aaPredicted RBP8.37□□□□□ -1.07
PTPRK-215ENST00000498284 DNMT3LQ9UJW3 386 aa8.37□□□□□ -1.07
PTPRK-215ENST00000498284 USP3Q9Y6I4 520 aa8.37□□□□□ -1.07
PTPRK-215ENST00000498284 POU4F2Q12837 409 aa8.36□□□□□ -1.07
PTPRK-215ENST00000498284 GNASQ5JWF2 1037 aa8.36□□□□□ -1.07
PTPRK-215ENST00000498284 TBCELQ5QJ74 424 aa8.36□□□□□ -1.07
PTPRK-215ENST00000498284 TREML4Q6UXN2 200 aa8.36□□□□□ -1.07
PTPRK-215ENST00000498284 NBPF15Q8N660 670 aa8.36□□□□□ -1.07
PTPRK-215ENST00000498284 SCG3Q8WXD2 468 aaKnown RBP8.36□□□□□ -1.07
PTPRK-215ENST00000498284 SLAIN2Q9P270 581 aa8.36□□□□□ -1.07
PTPRK-215ENST00000498284 SOBPA7XYQ1 873 aa8.35□□□□□ -1.07
PTPRK-215ENST00000498284 SPATA31C2B4DYI2 1134 aa8.35□□□□□ -1.07
PTPRK-215ENST00000498284 C21orf2O43822 256 aa8.35□□□□□ -1.07
PTPRK-215ENST00000498284 PRMT3O60678 531 aa8.35□□□□□ -1.07
PTPRK-215ENST00000498284 WEE1P30291 646 aa8.35□□□□□ -1.07
PTPRK-215ENST00000498284 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.35□□□□□ -1.072e-6■□□□□ 8.1
PTPRK-215ENST00000498284 RHBDD1Q8TEB9 315 aa8.35□□□□□ -1.07
PTPRK-215ENST00000498284 PRIMPOLQ96LW4 560 aa8.35□□□□□ -1.07
PTPRK-215ENST00000498284 NIFKQ9BYG3 293 aaKnown RBP8.35□□□□□ -1.07
PTPRK-215ENST00000498284 ATAD2Q6PL18 1390 aa8.35□□□□□ -1.07
PTPRK-215ENST00000498284 C11orf95C9JLR9 678 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-215ENST00000498284 SNRPBP14678 240 aaKnown RBP8.34□□□□□ -1.07
PTPRK-215ENST00000498284 IGFBP4P22692 258 aa8.34□□□□□ -1.07
PTPRK-215ENST00000498284 TAS1R3Q7RTX0 852 aa8.34□□□□□ -1.07
PTPRK-215ENST00000498284 HOMEZQ8IX15 550 aa8.34□□□□□ -1.07
PTPRK-215ENST00000498284 ZNF295-AS1Q8N0V1 137 aa8.34□□□□□ -1.07
PTPRK-215ENST00000498284 GAS2L2Q8NHY3 880 aa8.34□□□□□ -1.07
PTPRK-215ENST00000498284 CABP1Q9NZU7 370 aa8.34□□□□□ -1.07
PTPRK-215ENST00000498284 PPP1R12BO60237 982 aaPredicted RBP8.33□□□□□ -1.08
PTPRK-215ENST00000498284 RHOQP17081 205 aa8.33□□□□□ -1.08
PTPRK-215ENST00000498284 PSMA6P60900 246 aaKnown RBP8.33□□□□□ -1.08
PTPRK-215ENST00000498284 OCLNQ16625 522 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms