RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 GAS2L2Q8NHY3 880 aa6.11□□□□□ -1.43
CALD1-224ENST00000498254 TRIM47Q96LD4 638 aa6.11□□□□□ -1.43
CALD1-224ENST00000498254 HINFPQ9BQA5 517 aa6.11□□□□□ -1.43
CALD1-224ENST00000498254 MKNK1Q9BUB5 465 aa6.11□□□□□ -1.43
CALD1-224ENST00000498254 E9PSI1 815 aa6.1□□□□□ -1.43
CALD1-224ENST00000498254 DKK1O94907 266 aa6.1□□□□□ -1.43
CALD1-224ENST00000498254 NBPF20Q3BBV1 942 aa6.1□□□□□ -1.43
CALD1-224ENST00000498254 RNF20Q5VTR2 975 aa6.1□□□□□ -1.43
CALD1-224ENST00000498254 TRIM32Q13049 653 aa6.09□□□□□ -1.43
CALD1-224ENST00000498254 TSEN2Q8NCE0 465 aaKnown RBP6.09□□□□□ -1.43
CALD1-224ENST00000498254 MRGPRX2Q96LB1 330 aa6.09□□□□□ -1.43
CALD1-224ENST00000498254 PCDHGA11Q9Y5H2 935 aa6.09□□□□□ -1.43
CALD1-224ENST00000498254 H3BRB1 525 aa6.08□□□□□ -1.44
CALD1-224ENST00000498254 J3QL48 77 aa6.08□□□□□ -1.44
CALD1-224ENST00000498254 USP4Q13107 963 aa6.08□□□□□ -1.44
CALD1-224ENST00000498254 ARID5BQ14865 1188 aa6.08□□□□□ -1.44
CALD1-224ENST00000498254 GPAT2Q6NUI2 795 aa6.08□□□□□ -1.44
CALD1-224ENST00000498254 KIFC2Q96AC6 838 aa6.08□□□□□ -1.44
CALD1-224ENST00000498254 KCTD15Q96SI1 283 aaPredicted RBP6.08□□□□□ -1.44
CALD1-224ENST00000498254 C1QTNF2Q9BXJ5 285 aa6.08□□□□□ -1.44
CALD1-224ENST00000498254 TUT1Q9H6E5 874 aaKnown RBP6.08□□□□□ -1.44
CALD1-224ENST00000498254 CXXC1Q9P0U4 656 aaPredicted RBP6.08□□□□□ -1.44
CALD1-224ENST00000498254 UNCXA6NJT0 531 aa6.07□□□□□ -1.44
CALD1-224ENST00000498254 ESPNB1AK53 854 aa6.07□□□□□ -1.44
CALD1-224ENST00000498254 STAU1O95793 577 aaKnown RBP6.07□□□□□ -1.44
CALD1-224ENST00000498254 SCTRP47872 440 aa6.07□□□□□ -1.44
CALD1-224ENST00000498254 MARSP56192 900 aaKnown RBP6.07□□□□□ -1.44
CALD1-224ENST00000498254 OCLNQ16625 522 aa6.07□□□□□ -1.44
CALD1-224ENST00000498254 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.07□□□□□ -1.44
CALD1-224ENST00000498254 HPS1Q92902 700 aa6.07□□□□□ -1.44
CALD1-224ENST00000498254 SIRT1Q96EB6 747 aa6.07□□□□□ -1.44
CALD1-224ENST00000498254 AMOTL2Q9Y2J4 779 aa6.07□□□□□ -1.44
CALD1-224ENST00000498254 ERVH48-1M5A8F1 160 aa6.06□□□□□ -1.44
CALD1-224ENST00000498254 MYCP01106 439 aaPredicted RBP6.06□□□□□ -1.44
CALD1-224ENST00000498254 GMPRP36959 345 aa6.06□□□□□ -1.44
CALD1-224ENST00000498254 RASSF7Q02833 373 aa6.06□□□□□ -1.44
CALD1-224ENST00000498254 MTMR3Q13615 1198 aa6.06□□□□□ -1.44
CALD1-224ENST00000498254 INTS6LQ5JSJ4 861 aaKnown RBP6.06□□□□□ -1.44
CALD1-224ENST00000498254 DNAJC14Q6Y2X3 702 aaPredicted RBP6.06□□□□□ -1.44
CALD1-224ENST00000498254 CAPN12Q6ZSI9 719 aa6.06□□□□□ -1.44
CALD1-224ENST00000498254 VASH1Q7L8A9 365 aaPredicted RBP6.06□□□□□ -1.44
CALD1-224ENST00000498254 PURBQ96QR8 312 aaKnown RBP6.06□□□□□ -1.44
CALD1-224ENST00000498254 SEPT3Q9UH03 358 aa6.06□□□□□ -1.44
CALD1-224ENST00000498254 RNF225M0QZC1 329 aaPredicted RBP6.05□□□□□ -1.44
CALD1-224ENST00000498254 GSK3AP49840 483 aa6.05□□□□□ -1.44
CALD1-224ENST00000498254 SKOR1P84550 965 aa6.05□□□□□ -1.44
CALD1-224ENST00000498254 NOM1Q5C9Z4 860 aaKnown RBP6.05□□□□□ -1.44
CALD1-224ENST00000498254 GLYCTKQ8IVS8 523 aa6.05□□□□□ -1.44
CALD1-224ENST00000498254 TRMT44Q8IYL2 757 aaKnown RBP6.05□□□□□ -1.44
CALD1-224ENST00000498254 ESF1Q9H501 851 aaKnown RBP6.05□□□□□ -1.44
CALD1-224ENST00000498254 FSHRP23945 695 aa6.04□□□□□ -1.44
CALD1-224ENST00000498254 FKBP5Q13451 457 aaPredicted RBP6.04□□□□□ -1.44
CALD1-224ENST00000498254 NAA30Q147X3 362 aaPredicted RBP6.04□□□□□ -1.44
CALD1-224ENST00000498254 TAS1R3Q7RTX0 852 aa6.04□□□□□ -1.44
CALD1-224ENST00000498254 SEPT12Q8IYM1 358 aa6.04□□□□□ -1.44
CALD1-224ENST00000498254 C1orf216Q8TAB5 229 aa6.04□□□□□ -1.44
CALD1-224ENST00000498254 GTF3C2Q8WUA4 911 aaPredicted RBP6.04□□□□□ -1.44
CALD1-224ENST00000498254 CYLDQ9NQC7 956 aa6.04□□□□□ -1.44
CALD1-224ENST00000498254 TMPRSS4Q9NRS4 437 aa6.04□□□□□ -1.44
CALD1-224ENST00000498254 ZNF358Q9NW07 568 aa6.04□□□□□ -1.44
CALD1-224ENST00000498254 CDV3Q9UKY7 258 aaKnown RBP6.04□□□□□ -1.44
CALD1-224ENST00000498254 RC3H1Q5TC82 1133 aaKnown RBP6.03□□□□□ -1.44
CALD1-224ENST00000498254 EHBP1Q8NDI1 1231 aa6.03□□□□□ -1.44
CALD1-224ENST00000498254 BCL2L13Q9BXK5 485 aa6.03□□□□□ -1.44
CALD1-224ENST00000498254 SERTAD1Q9UHV2 236 aa6.03□□□□□ -1.44
CALD1-224ENST00000498254 DNMT3AQ9Y6K1 912 aaPredicted RBP6.03□□□□□ -1.44
CALD1-224ENST00000498254 TLL2Q9Y6L7 1015 aa6.03□□□□□ -1.44
CALD1-224ENST00000498254 ANKRD33BA6NCL7 494 aa6.02□□□□□ -1.45
CALD1-224ENST00000498254 ICMTO60725 284 aa6.02□□□□□ -1.45
CALD1-224ENST00000498254 MAPK1P28482 360 aa6.02□□□□□ -1.45
CALD1-224ENST00000498254 TNS4Q8IZW8 715 aa6.02□□□□□ -1.45
CALD1-224ENST00000498254 GIPC2Q8TF65 315 aa6.02□□□□□ -1.45
CALD1-224ENST00000498254 CHMP7Q8WUX9 453 aaPredicted RBP6.02□□□□□ -1.45
CALD1-224ENST00000498254 IRF7Q92985 503 aa6.02□□□□□ -1.45
CALD1-224ENST00000498254 NXF1Q9UBU9 619 aaKnown RBP6.02□□□□□ -1.45
CALD1-224ENST00000498254 TMEM229AB2RXF0 380 aa6.01□□□□□ -1.45
CALD1-224ENST00000498254 ADAM23O75077 832 aa6.01□□□□□ -1.45
CALD1-224ENST00000498254 VARSP26640 1264 aaKnown RBP6.01□□□□□ -1.45
CALD1-224ENST00000498254 WEE1P30291 646 aa6.01□□□□□ -1.45
CALD1-224ENST00000498254 GDF10P55107 478 aa6.01□□□□□ -1.45
CALD1-224ENST00000498254 WNT7BP56706 349 aa6.01□□□□□ -1.45
CALD1-224ENST00000498254 CC2D2BQ6DHV5 1058 aa6.01□□□□□ -1.45
CALD1-224ENST00000498254 Q8N3U1 123 aa6.01□□□□□ -1.45
CALD1-224ENST00000498254 SCG3Q8WXD2 468 aaKnown RBP6.01□□□□□ -1.45
CALD1-224ENST00000498254 RBM47A0AV96 593 aaKnown RBP6□□□□□ -1.45
CALD1-224ENST00000498254 C21orf2O43822 256 aa6□□□□□ -1.45
CALD1-224ENST00000498254 SCNN1DP51172 638 aa6□□□□□ -1.45
CALD1-224ENST00000498254 TBCELQ5QJ74 424 aa6□□□□□ -1.45
CALD1-224ENST00000498254 ZNF784Q8NCA9 323 aaPredicted RBP6□□□□□ -1.45
CALD1-224ENST00000498254 MRRFQ96E11 262 aaKnown RBP6□□□□□ -1.45
CALD1-224ENST00000498254 OSBPL3Q9H4L5 887 aa6□□□□□ -1.45
CALD1-224ENST00000498254 RAB6BQ9NRW1 208 aa6□□□□□ -1.45
CALD1-224ENST00000498254 EGFL7Q9UHF1 273 aa6□□□□□ -1.45
CALD1-224ENST00000498254 ALDH1A1P00352 501 aa5.99□□□□□ -1.45
CALD1-224ENST00000498254 ZNF16P17020 682 aaPredicted RBP5.99□□□□□ -1.45
CALD1-224ENST00000498254 ERVK-9P63128 1117 aa5.99□□□□□ -1.45
CALD1-224ENST00000498254 NPAS4Q8IUM7 802 aa5.99□□□□□ -1.45
CALD1-224ENST00000498254 NPAS3Q8IXF0 933 aa5.99□□□□□ -1.45
CALD1-224ENST00000498254 TSPAN10Q9H1Z9 355 aaPredicted RBP5.99□□□□□ -1.45
CALD1-224ENST00000498254 MAP4K5Q9Y4K4 846 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms