RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 TMPRSS3P57727 454 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 RDH13Q8NBN7 331 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 PCSK9Q8NBP7 692 aaKnown RBP1.93□□□□□ -2.1
XRN1-214ENST00000498077 REPIN1Q9BWE0 567 aaKnown RBP1.93□□□□□ -2.1
XRN1-214ENST00000498077 PCDHA3Q9Y5H8 950 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 NEURL4Q96JN8 1562 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 CEP170BQ9Y4F5 1589 aaPredicted RBP1.93□□□□□ -2.1
XRN1-214ENST00000498077 RAPGEF3O95398 923 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 MST1RQ04912 1400 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 ABCA3Q99758 1704 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 TMEM131LA2VDJ0 1609 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 A2ML1A8K2U0 1454 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 NCOA3Q9Y6Q9 1424 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 ACTN1P12814 892 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 MCCD1P59942 119 aaPredicted RBP1.92□□□□□ -2.1
XRN1-214ENST00000498077 Q6ZNB5 142 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 C1QTNF1Q9BXJ1 281 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 ADAMTS12P58397 1594 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 A0A1W2PPC1 479 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 IBSPP21815 317 aaPredicted RBP1.92□□□□□ -2.1
XRN1-214ENST00000498077 EXOSC10Q01780 885 aaKnown RBP1.92□□□□□ -2.1
XRN1-214ENST00000498077 NUP88Q99567 741 aaPredicted RBP1.92□□□□□ -2.1
XRN1-214ENST00000498077 ZNF330Q9Y3S2 320 aaPredicted RBP1.92□□□□□ -2.1
XRN1-214ENST00000498077 ZCCHC11Q5TAX3 1644 aaKnown RBP1.92□□□□□ -2.1
XRN1-214ENST00000498077 PLEKHG3A1L390 1219 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 FAM177BA6PVY3 158 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 GTPBP6O43824 516 aaPredicted RBP1.92□□□□□ -2.1
XRN1-214ENST00000498077 UPP2O95045 317 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 SCARF1Q14162 830 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 ZBED2Q9BTP6 218 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 CARD14Q9BXL6 1004 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 RGPD3A6NKT7 1758 aaPredicted RBP1.92□□□□□ -2.1
XRN1-214ENST00000498077 RGPD4Q7Z3J3 1758 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 PIK3R2O00459 728 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 VEGFBP49765 207 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 TMEM132EQ6IEE7 984 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 TIFABQ6ZNK6 161 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 USP48Q86UV5 1035 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 C16orf71Q8IYS4 520 aaPredicted RBP1.92□□□□□ -2.1
XRN1-214ENST00000498077 CFAP57Q96MR6 1250 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 RXFP3Q9NSD7 469 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 NRKQ7Z2Y5 1582 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 ABCA5Q8WWZ7 1642 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 CICQ96RK0 1608 aaPredicted RBP1.92□□□□□ -2.1
XRN1-214ENST00000498077 ZSCAN5CA6NGD5 496 aaPredicted RBP1.92□□□□□ -2.1
XRN1-214ENST00000498077 RIPPLY3P57055 190 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 TMEM130Q8N3G9 435 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 CCDC102AQ96A19 550 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 COL25A1Q9BXS0 654 aaPredicted RBP1.92□□□□□ -2.1
XRN1-214ENST00000498077 CSRNP2Q9H175 543 aa1.92□□□□□ -2.1
XRN1-214ENST00000498077 POLA1P09884 1462 aaPredicted RBP1.91□□□□□ -2.1
XRN1-214ENST00000498077 MYO3AQ8NEV4 1616 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 USP32Q8NFA0 1604 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 INSM1Q01101 510 aaPredicted RBP1.91□□□□□ -2.1
XRN1-214ENST00000498077 ZFRQ96KR1 1074 aaKnown RBP1.91□□□□□ -2.1
XRN1-214ENST00000498077 AK7Q96M32 723 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 GJA3Q9Y6H8 435 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 ATP7AQ04656 1500 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 EFCAB6Q5THR3 1501 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 MROH1Q8NDA8 1641 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 DPYSL4O14531 572 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 LMNB1P20700 586 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 CAMK2BQ13554 666 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 ZFYVE1Q9HBF4 777 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 DENND4BO75064 1496 aaPredicted RBP1.91□□□□□ -2.1
XRN1-214ENST00000498077 TTC24A2A3L6 582 aaPredicted RBP1.91□□□□□ -2.1
XRN1-214ENST00000498077 CA12O43570 354 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 PIK3CAP42336 1068 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 ELF2Q15723 593 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 FOXR1Q6PIV2 292 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 RIPOR1Q6ZS17 1223 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 SLC6A16Q9GZN6 736 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 ATP10AO60312 1499 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 FHAD1B1AJZ9 1412 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 RFX1P22670 979 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 INTS6LQ5JSJ4 861 aaKnown RBP1.91□□□□□ -2.1
XRN1-214ENST00000498077 ZNF787Q6DD87 383 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 UIMC1Q96RL1 719 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 ABT1Q9ULW3 272 aaKnown RBP1.91□□□□□ -2.1
XRN1-214ENST00000498077 SCINQ9Y6U3 715 aa1.91□□□□□ -2.1
XRN1-214ENST00000498077 NTRK1P04629 796 aa1.9□□□□□ -2.1
XRN1-214ENST00000498077 TNIP1Q15025 636 aa1.9□□□□□ -2.1
XRN1-214ENST00000498077 EP400NLQ6ZTU2 488 aa1.9□□□□□ -2.1
XRN1-214ENST00000498077 GPIHBP1Q8IV16 184 aa1.9□□□□□ -2.1
XRN1-214ENST00000498077 CDCA7LQ96GN5 454 aa1.9□□□□□ -2.1
XRN1-214ENST00000498077 FGD5Q6ZNL6 1462 aa1.9□□□□□ -2.1
XRN1-214ENST00000498077 DHX57Q6P158 1386 aaKnown RBP1.9□□□□□ -2.1
XRN1-214ENST00000498077 MAGEB6P1A0A0J9YX57 407 aa1.9□□□□□ -2.1
XRN1-214ENST00000498077 A0A1W2PQ27 194 aa1.9□□□□□ -2.1
XRN1-214ENST00000498077 A0A1W2PQ64 194 aa1.9□□□□□ -2.1
XRN1-214ENST00000498077 A0A1W2PQC6 194 aa1.9□□□□□ -2.1
XRN1-214ENST00000498077 A0A1W2PQD8 194 aa1.9□□□□□ -2.1
XRN1-214ENST00000498077 PDIA6Q15084 440 aa1.9□□□□□ -2.1
XRN1-214ENST00000498077 DMRTA1Q5VZB9 504 aa1.9□□□□□ -2.1
XRN1-214ENST00000498077 KAZNQ674X7 775 aa1.9□□□□□ -2.1
XRN1-214ENST00000498077 STXBP5LQ9Y2K9 1186 aa1.9□□□□□ -2.1
XRN1-214ENST00000498077 RPRD2Q5VT52 1461 aaKnown RBP1.9□□□□□ -2.11
XRN1-214ENST00000498077 FMN1Q68DA7 1419 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 HIC1Q14526 733 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 KRT28Q7Z3Y7 464 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms