RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 DDX54Q8TDD1 881 aaKnown RBP15.6■□□□□ 0.09
GAPVD1-220ENST00000497580 ZSCAN22P10073 491 aaPredicted RBP15.6■□□□□ 0.09
GAPVD1-220ENST00000497580 PDE1AP54750 535 aa15.6■□□□□ 0.09
GAPVD1-220ENST00000497580 STX6O43752 255 aa15.59■□□□□ 0.09
GAPVD1-220ENST00000497580 PLPPR3Q6T4P5 718 aa15.59■□□□□ 0.09
GAPVD1-220ENST00000497580 MAST1Q9Y2H9 1570 aa15.59■□□□□ 0.09
GAPVD1-220ENST00000497580 GNAI1P63096 354 aa15.59■□□□□ 0.09
GAPVD1-220ENST00000497580 ARHGAP45Q92619 1136 aa15.59■□□□□ 0.09
GAPVD1-220ENST00000497580 INTS4Q96HW7 963 aaKnown RBP15.59■□□□□ 0.09
GAPVD1-220ENST00000497580 CPA1P15085 419 aa15.59■□□□□ 0.09
GAPVD1-220ENST00000497580 CAPN2P17655 700 aa15.59■□□□□ 0.09
GAPVD1-220ENST00000497580 SYT1P21579 422 aa15.59■□□□□ 0.09
GAPVD1-220ENST00000497580 TMX1Q9H3N1 280 aa15.59■□□□□ 0.09
GAPVD1-220ENST00000497580 MORC2Q9Y6X9 1032 aaPredicted RBP15.59■□□□□ 0.09
GAPVD1-220ENST00000497580 EVC2Q86UK5 1308 aa15.59■□□□□ 0.09
GAPVD1-220ENST00000497580 GOLGA6L4A6NEF3 574 aa15.58■□□□□ 0.09
GAPVD1-220ENST00000497580 POLR3GO15318 223 aaPredicted RBP15.58■□□□□ 0.09
GAPVD1-220ENST00000497580 ZNF397Q8NF99 534 aaPredicted RBP15.58■□□□□ 0.09
GAPVD1-220ENST00000497580 SYTL4Q96C24 671 aaPredicted RBP15.58■□□□□ 0.09
GAPVD1-220ENST00000497580 FAM173BQ6P4H8 233 aa15.58■□□□□ 0.08
GAPVD1-220ENST00000497580 ATP10AO60312 1499 aa15.58■□□□□ 0.08
GAPVD1-220ENST00000497580 UNC13BO14795 1591 aa15.58■□□□□ 0.08
GAPVD1-220ENST00000497580 FBXO38Q6PIJ6 1188 aa15.58■□□□□ 0.08
GAPVD1-220ENST00000497580 NOL10Q9BSC4 688 aaKnown RBP15.58■□□□□ 0.08
GAPVD1-220ENST00000497580 ABCA8O94911 1581 aa15.57■□□□□ 0.08
GAPVD1-220ENST00000497580 IQGAP3Q86VI3 1631 aa15.57■□□□□ 0.08
GAPVD1-220ENST00000497580 FAM200AQ8TCP9 573 aa15.57■□□□□ 0.08
GAPVD1-220ENST00000497580 ANO6Q4KMQ2 910 aa15.57■□□□□ 0.08
GAPVD1-220ENST00000497580 CCDC83Q8IWF9 413 aa15.57■□□□□ 0.08
GAPVD1-220ENST00000497580 CLIP2Q9UDT6 1046 aa15.57■□□□□ 0.08
GAPVD1-220ENST00000497580 ERCC6L2Q5T890 1561 aa15.56■□□□□ 0.08
GAPVD1-220ENST00000497580 F13A1P00488 732 aa15.56■□□□□ 0.08
GAPVD1-220ENST00000497580 ZSCAN25Q6NSZ9 544 aa15.56■□□□□ 0.08
GAPVD1-220ENST00000497580 FILIP1Q7Z7B0 1213 aa15.56■□□□□ 0.08
GAPVD1-220ENST00000497580 MED14O60244 1454 aa15.56■□□□□ 0.08
GAPVD1-220ENST00000497580 ARID5BQ14865 1188 aa15.56■□□□□ 0.08
GAPVD1-220ENST00000497580 GORABQ5T7V8 394 aa15.56■□□□□ 0.08
GAPVD1-220ENST00000497580 RPAP2Q8IXW5 612 aaPredicted RBP15.56■□□□□ 0.08
GAPVD1-220ENST00000497580 FBXW7Q969H0 707 aa15.56■□□□□ 0.08
GAPVD1-220ENST00000497580 ZNF428Q96B54 188 aa15.56■□□□□ 0.08
GAPVD1-220ENST00000497580 PAXBP1Q9Y5B6 917 aa15.56■□□□□ 0.08
GAPVD1-220ENST00000497580 HNRNPH2P55795 449 aaKnown RBP15.56■□□□□ 0.08
GAPVD1-220ENST00000497580 MAP3K11Q16584 847 aa15.56■□□□□ 0.08
GAPVD1-220ENST00000497580 NUP62CLQ9H1M0 184 aa15.56■□□□□ 0.08
GAPVD1-220ENST00000497580 USP27XA6NNY8 438 aa15.55■□□□□ 0.08
GAPVD1-220ENST00000497580 TYRO3Q06418 890 aa15.55■□□□□ 0.08
GAPVD1-220ENST00000497580 CACTINQ8WUQ7 758 aaKnown RBP15.55■□□□□ 0.08
GAPVD1-220ENST00000497580 ATP6V1DQ9Y5K8 247 aa15.55■□□□□ 0.08
GAPVD1-220ENST00000497580 HMMRO75330 724 aa15.55■□□□□ 0.08
GAPVD1-220ENST00000497580 TCHHQ07283 1943 aa15.55■□□□□ 0.08
GAPVD1-220ENST00000497580 IRX3P78415 501 aaPredicted RBP15.55■□□□□ 0.08
GAPVD1-220ENST00000497580 PTPN14Q15678 1187 aa15.55■□□□□ 0.08
GAPVD1-220ENST00000497580 NFE2L2Q16236 605 aa15.55■□□□□ 0.08
GAPVD1-220ENST00000497580 NEK11Q8NG66 645 aa15.55■□□□□ 0.08
GAPVD1-220ENST00000497580 RIMBP3CA6NJZ7 1639 aa15.54■□□□□ 0.08
GAPVD1-220ENST00000497580 RIMBP3BA6NNM3 1639 aa15.54■□□□□ 0.08
GAPVD1-220ENST00000497580 RIMBP3Q9UFD9 1639 aa15.54■□□□□ 0.08
GAPVD1-220ENST00000497580 F6X3S4 739 aa15.54■□□□□ 0.08
GAPVD1-220ENST00000497580 TNMDQ9H2S6 317 aa15.54■□□□□ 0.08
GAPVD1-220ENST00000497580 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.54■□□□□ 0.08
GAPVD1-220ENST00000497580 NCBP3Q53F19 620 aaKnown RBP15.54■□□□□ 0.08
GAPVD1-220ENST00000497580 DUOX2Q9NRD8 1548 aa15.54■□□□□ 0.08
GAPVD1-220ENST00000497580 FYB1O15117 783 aa15.54■□□□□ 0.08
GAPVD1-220ENST00000497580 PRAM1Q96QH2 718 aa15.54■□□□□ 0.08
GAPVD1-220ENST00000497580 FUCA2Q9BTY2 467 aa15.54■□□□□ 0.08
GAPVD1-220ENST00000497580 CBX8Q9HC52 389 aa15.54■□□□□ 0.08
GAPVD1-220ENST00000497580 CABP1Q9NZU7 370 aa15.53■□□□□ 0.08
GAPVD1-220ENST00000497580 MSH6P52701 1360 aa15.53■□□□□ 0.08
GAPVD1-220ENST00000497580 RPAP1Q9BWH6 1393 aaPredicted RBP15.53■□□□□ 0.08
GAPVD1-220ENST00000497580 FCHSD2O94868 740 aa15.53■□□□□ 0.08
GAPVD1-220ENST00000497580 LIG1P18858 919 aa15.53■□□□□ 0.08
GAPVD1-220ENST00000497580 UNC5CLQ8IV45 518 aa15.53■□□□□ 0.08
GAPVD1-220ENST00000497580 IL1RAPL2Q9NP60 686 aa15.53■□□□□ 0.08
GAPVD1-220ENST00000497580 CHMLP26374 656 aa15.53■□□□□ 0.08
GAPVD1-220ENST00000497580 AK2P54819 239 aa15.53■□□□□ 0.08
GAPVD1-220ENST00000497580 DNAJC25Q9H1X3 360 aa15.53■□□□□ 0.08
GAPVD1-220ENST00000497580 GJB2P29033 226 aa15.52■□□□□ 0.08
GAPVD1-220ENST00000497580 RBM6P78332 1123 aaKnown RBP15.52■□□□□ 0.08
GAPVD1-220ENST00000497580 MLECQ14165 292 aa15.52■□□□□ 0.08
GAPVD1-220ENST00000497580 CHMP4CQ96CF2 233 aa15.52■□□□□ 0.08
GAPVD1-220ENST00000497580 TFIP11Q9UBB9 837 aaKnown RBP15.52■□□□□ 0.08
GAPVD1-220ENST00000497580 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.52■□□□□ 0.08
GAPVD1-220ENST00000497580 PTCH1Q13635 1447 aa15.52■□□□□ 0.08
GAPVD1-220ENST00000497580 CCDC144BQ3MJ40 725 aa15.52■□□□□ 0.07
GAPVD1-220ENST00000497580 CCDC144CPQ8IYA2 1237 aa15.52■□□□□ 0.07
GAPVD1-220ENST00000497580 MRVI1Q9Y6F6 885 aa15.52■□□□□ 0.07
GAPVD1-220ENST00000497580 NECTIN2Q92692 538 aa15.52■□□□□ 0.07
GAPVD1-220ENST00000497580 IL25Q9H293 177 aa15.52■□□□□ 0.07
GAPVD1-220ENST00000497580 DACT1Q9NYF0 836 aa15.52■□□□□ 0.07
GAPVD1-220ENST00000497580 ADGRL1O94910 1474 aa15.51■□□□□ 0.07
GAPVD1-220ENST00000497580 ZNF75DP51815 510 aa15.51■□□□□ 0.07
GAPVD1-220ENST00000497580 CLTCL1P53675 1640 aa15.51■□□□□ 0.07
GAPVD1-220ENST00000497580 A0A1W2PP64 1363 aa15.51■□□□□ 0.07
GAPVD1-220ENST00000497580 ERCC6LQ2NKX8 1250 aa15.51■□□□□ 0.07
GAPVD1-220ENST00000497580 BICD2Q8TD16 824 aa15.51■□□□□ 0.07
GAPVD1-220ENST00000497580 RAPGEF3O95398 923 aa15.5■□□□□ 0.07
GAPVD1-220ENST00000497580 BRPF1P55201 1214 aaPredicted RBP15.5■□□□□ 0.07
GAPVD1-220ENST00000497580 NECAB1Q8N987 351 aa15.5■□□□□ 0.07
GAPVD1-220ENST00000497580 TMEM87AQ8NBN3 555 aa15.5■□□□□ 0.07
GAPVD1-220ENST00000497580 CDC42BPBQ9Y5S2 1711 aa15.5■□□□□ 0.07
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