RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 ANO8Q9HCE9 1232 aaPredicted RBP18.49■□□□□ 0.55
VPS26A-209ENST00000497564 MAP3K5Q99683 1374 aa18.48■□□□□ 0.55
VPS26A-209ENST00000497564 CYP27B1O15528 508 aa18.48■□□□□ 0.55
VPS26A-209ENST00000497564 PRIM1P49642 420 aaKnown RBP18.48■□□□□ 0.55
VPS26A-209ENST00000497564 TXNRD1Q16881 649 aa18.48■□□□□ 0.55
VPS26A-209ENST00000497564 PLEKHO1Q53GL0 409 aaPredicted RBP18.48■□□□□ 0.55
VPS26A-209ENST00000497564 MYH16Q9H6N6 1097 aa18.48■□□□□ 0.55
VPS26A-209ENST00000497564 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.47■□□□□ 0.55
VPS26A-209ENST00000497564 GNAT3A8MTJ3 354 aa18.46■□□□□ 0.55
VPS26A-209ENST00000497564 SYTL4Q96C24 671 aaPredicted RBP18.46■□□□□ 0.55
VPS26A-209ENST00000497564 IFT57Q9NWB7 429 aa18.45■□□□□ 0.54
VPS26A-209ENST00000497564 PCDH11XQ9BZA7 1347 aa18.45■□□□□ 0.54
VPS26A-209ENST00000497564 PCDH11YQ9BZA8 1340 aa18.45■□□□□ 0.54
VPS26A-209ENST00000497564 KDM3BQ7LBC6 1761 aa18.45■□□□□ 0.54
VPS26A-209ENST00000497564 ZNF853P0CG23 659 aa18.44■□□□□ 0.54
VPS26A-209ENST00000497564 TOGARAM1Q9Y4F4 1720 aa18.43■□□□□ 0.54
VPS26A-209ENST00000497564 GNAI1P63096 354 aa18.43■□□□□ 0.54
VPS26A-209ENST00000497564 AKAP4Q5JQC9 854 aa18.43■□□□□ 0.54
VPS26A-209ENST00000497564 NBPF14Q5TI25 921 aa18.43■□□□□ 0.54
VPS26A-209ENST00000497564 RTF1Q92541 710 aaKnown RBP18.43■□□□□ 0.54
VPS26A-209ENST00000497564 FANCIQ9NVI1 1328 aa18.43■□□□□ 0.54
VPS26A-209ENST00000497564 CEMIPQ8WUJ3 1361 aa18.42■□□□□ 0.54
VPS26A-209ENST00000497564 KCNQ4P56696 695 aa18.42■□□□□ 0.54
VPS26A-209ENST00000497564 ZNF530Q6P9A1 599 aaPredicted RBP18.42■□□□□ 0.54
VPS26A-209ENST00000497564 CFAP44Q96MT7 982 aa18.42■□□□□ 0.54
VPS26A-209ENST00000497564 PDGFDQ9GZP0 370 aaPredicted RBP18.42■□□□□ 0.54
VPS26A-209ENST00000497564 LRRC4BQ9NT99 713 aa18.42■□□□□ 0.54
VPS26A-209ENST00000497564 RNF123Q5XPI4 1314 aa18.42■□□□□ 0.54
VPS26A-209ENST00000497564 THUMPD2Q9BTF0 503 aaKnown RBP18.41■□□□□ 0.54
VPS26A-209ENST00000497564 RCAN3Q9UKA8 241 aa18.41■□□□□ 0.54
VPS26A-209ENST00000497564 SPG7Q9UQ90 795 aa18.41■□□□□ 0.54
VPS26A-209ENST00000497564 CACNA1FO60840 1977 aa18.41■□□□□ 0.54
VPS26A-209ENST00000497564 CT47B1P0C2W7 299 aaPredicted RBP18.4■□□□□ 0.54
VPS26A-209ENST00000497564 DCTN1Q14203 1278 aa18.4■□□□□ 0.54
VPS26A-209ENST00000497564 MCM10Q7L590 875 aa18.4■□□□□ 0.54
VPS26A-209ENST00000497564 LRP5O75197 1615 aa18.4■□□□□ 0.54
VPS26A-209ENST00000497564 PAPPAQ13219 1627 aa18.4■□□□□ 0.54
VPS26A-209ENST00000497564 C1orf141Q5JVX7 400 aa18.39■□□□□ 0.53
VPS26A-209ENST00000497564 SUPT16HQ9Y5B9 1047 aaKnown RBP18.39■□□□□ 0.53
VPS26A-209ENST00000497564 IL17REQ8NFR9 667 aa18.38■□□□□ 0.53
VPS26A-209ENST00000497564 BABAM1Q9NWV8 329 aa18.38■□□□□ 0.53
VPS26A-209ENST00000497564 MRC1P22897 1456 aa18.38■□□□□ 0.53
VPS26A-209ENST00000497564 ITGB4P16144 1822 aa18.37■□□□□ 0.53
VPS26A-209ENST00000497564 CHL1O00533 1208 aa18.37■□□□□ 0.53
VPS26A-209ENST00000497564 PHKG2P15735 406 aa18.37■□□□□ 0.53
VPS26A-209ENST00000497564 NKX1-1Q15270 411 aaPredicted RBP18.37■□□□□ 0.53
VPS26A-209ENST00000497564 ZNF827Q17R98 1081 aa18.37■□□□□ 0.53
VPS26A-209ENST00000497564 MPRIPQ6WCQ1 1025 aa18.37■□□□□ 0.53
VPS26A-209ENST00000497564 TSR2Q969E8 191 aaKnown RBP18.37■□□□□ 0.53
VPS26A-209ENST00000497564 LY75O60449 1722 aa18.36■□□□□ 0.53
VPS26A-209ENST00000497564 SLC15A2Q16348 729 aa18.36■□□□□ 0.53
VPS26A-209ENST00000497564 IFNL2Q8IZJ0 200 aa18.36■□□□□ 0.53
VPS26A-209ENST00000497564 MBIPQ9NS73 344 aa18.36■□□□□ 0.53
VPS26A-209ENST00000497564 CASZ1Q86V15 1759 aa18.35■□□□□ 0.53
VPS26A-209ENST00000497564 STK32BQ9NY57 414 aa18.35■□□□□ 0.53
VPS26A-209ENST00000497564 KDM6AO15550 1401 aaPredicted RBP18.34■□□□□ 0.53
VPS26A-209ENST00000497564 RNMTO43148 476 aaKnown RBP18.34■□□□□ 0.53
VPS26A-209ENST00000497564 HSP90AB1P08238 724 aaKnown RBP18.34■□□□□ 0.53
VPS26A-209ENST00000497564 EXOSC9Q06265 439 aaKnown RBP18.34■□□□□ 0.53
VPS26A-209ENST00000497564 PIGBQ92521 554 aa18.34■□□□□ 0.53
VPS26A-209ENST00000497564 TAF7Q15545 349 aaPredicted RBP18.33■□□□□ 0.52
VPS26A-209ENST00000497564 LAS1LQ9Y4W2 734 aaKnown RBP18.33■□□□□ 0.52
VPS26A-209ENST00000497564 SLC27A3Q5K4L6 730 aa18.32■□□□□ 0.52
VPS26A-209ENST00000497564 ZNF428Q96B54 188 aa18.32■□□□□ 0.52
VPS26A-209ENST00000497564 LGR6Q9HBX8 967 aa18.32■□□□□ 0.52
VPS26A-209ENST00000497564 PALLDQ8WX93 1383 aa18.31■□□□□ 0.52
VPS26A-209ENST00000497564 AKT1S1Q96B36 256 aa18.31■□□□□ 0.52
VPS26A-209ENST00000497564 CCNL1Q9UK58 526 aaPredicted RBP18.31■□□□□ 0.52
VPS26A-209ENST00000497564 UBR2Q8IWV8 1755 aa18.3■□□□□ 0.52
VPS26A-209ENST00000497564 ZBTB7AO95365 584 aa18.3■□□□□ 0.52
VPS26A-209ENST00000497564 NEFLP07196 543 aa18.3■□□□□ 0.52
VPS26A-209ENST00000497564 RRP1P56182 461 aaKnown RBP18.3■□□□□ 0.52
VPS26A-209ENST00000497564 DCAF5Q96JK2 942 aa18.3■□□□□ 0.52
VPS26A-209ENST00000497564 GTF3C3Q9Y5Q9 886 aa18.3■□□□□ 0.52
VPS26A-209ENST00000497564 TUBGCP6Q96RT7 1819 aa18.29■□□□□ 0.52
VPS26A-209ENST00000497564 RARSP54136 660 aaKnown RBP18.29■□□□□ 0.52
VPS26A-209ENST00000497564 TEFQ10587 303 aa18.29■□□□□ 0.52
VPS26A-209ENST00000497564 TSPYL4Q9UJ04 414 aa18.29■□□□□ 0.52
VPS26A-209ENST00000497564 TMOD3Q9NYL9 352 aa18.28■□□□□ 0.52
VPS26A-209ENST00000497564 ASAP1Q9ULH1 1129 aa18.28■□□□□ 0.52
VPS26A-209ENST00000497564 SOS1Q07889 1333 aaPredicted RBP18.27■□□□□ 0.52
VPS26A-209ENST00000497564 SPON1Q9HCB6 807 aa18.27■□□□□ 0.52
VPS26A-209ENST00000497564 ATF5Q9Y2D1 282 aaPredicted RBP18.27■□□□□ 0.52
VPS26A-209ENST00000497564 VAMP4O75379 141 aa18.26■□□□□ 0.51
VPS26A-209ENST00000497564 ALDH1L2Q3SY69 923 aa18.26■□□□□ 0.51
VPS26A-209ENST00000497564 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.26■□□□□ 0.51
VPS26A-209ENST00000497564 PNPLA7Q6ZV29 1317 aa18.25■□□□□ 0.51
VPS26A-209ENST00000497564 C5P01031 1676 aa18.25■□□□□ 0.51
VPS26A-209ENST00000497564 LAMB4A4D0S4 1761 aa18.25■□□□□ 0.51
VPS26A-209ENST00000497564 TWISTNBQ3B726 338 aaPredicted RBP18.25■□□□□ 0.51
VPS26A-209ENST00000497564 ERICH6BQ5W0A0 696 aa18.25■□□□□ 0.51
VPS26A-209ENST00000497564 C8orf58Q8NAV2 365 aa18.25■□□□□ 0.51
VPS26A-209ENST00000497564 SLC52A2Q9HAB3 445 aa18.25■□□□□ 0.51
VPS26A-209ENST00000497564 ATG3Q9NT62 314 aa18.25■□□□□ 0.51
VPS26A-209ENST00000497564 TAF1LQ8IZX4 1826 aa18.25■□□□□ 0.51
VPS26A-209ENST00000497564 ERVV-2B6SEH9 535 aa18.24■□□□□ 0.51
VPS26A-209ENST00000497564 PTGER2P43116 358 aa18.24■□□□□ 0.51
VPS26A-209ENST00000497564 BRPF1P55201 1214 aaPredicted RBP18.24■□□□□ 0.51
VPS26A-209ENST00000497564 TSPYL6Q8N831 410 aa18.24■□□□□ 0.51
VPS26A-209ENST00000497564 SMARCC1Q92922 1105 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms