RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 ADD1P35611 737 aaKnown RBP10.02□□□□□ -0.81
MSH5-219ENST00000497269 Q6ZNB5 142 aa10.02□□□□□ -0.81
MSH5-219ENST00000497269 NFATC2IPQ8NCF5 419 aa10.02□□□□□ -0.81
MSH5-219ENST00000497269 KLF16Q9BXK1 252 aaPredicted RBP10.02□□□□□ -0.81
MSH5-219ENST00000497269 ABCC2Q92887 1545 aa10.02□□□□□ -0.81
MSH5-219ENST00000497269 DISP1Q96F81 1524 aa10.02□□□□□ -0.81
MSH5-219ENST00000497269 UACAQ9BZF9 1416 aa10.01□□□□□ -0.81
MSH5-219ENST00000497269 DGAT1O75907 488 aa10.01□□□□□ -0.81
MSH5-219ENST00000497269 STAU1O95793 577 aaKnown RBP10.01□□□□□ -0.81
MSH5-219ENST00000497269 ERVK-9P63128 1117 aa10.01□□□□□ -0.81
MSH5-219ENST00000497269 MKRN1Q9UHC7 482 aaKnown RBP10.01□□□□□ -0.81
MSH5-219ENST00000497269 CHIC2Q9UKJ5 165 aa10.01□□□□□ -0.81
MSH5-219ENST00000497269 RAPGEF2Q9Y4G8 1499 aa10.01□□□□□ -0.81
MSH5-219ENST00000497269 BMP1P13497 986 aa10□□□□□ -0.81
MSH5-219ENST00000497269 RELBQ01201 579 aa10□□□□□ -0.81
MSH5-219ENST00000497269 PSME1Q06323 249 aa10□□□□□ -0.81
MSH5-219ENST00000497269 USP4Q13107 963 aa10□□□□□ -0.81
MSH5-219ENST00000497269 LAPTM4AQ15012 233 aa10□□□□□ -0.81
MSH5-219ENST00000497269 NOD1Q9Y239 953 aa10□□□□□ -0.81
MSH5-219ENST00000497269 AXIN1O15169 862 aa9.99□□□□□ -0.81
MSH5-219ENST00000497269 OSBPL3Q9H4L5 887 aa9.99□□□□□ -0.81
MSH5-219ENST00000497269 ZNF395Q9H8N7 513 aaPredicted RBP9.99□□□□□ -0.81
MSH5-219ENST00000497269 RAB6BQ9NRW1 208 aa9.99□□□□□ -0.81
MSH5-219ENST00000497269 GTF2IP78347 998 aa9.98□□□□□ -0.81
MSH5-219ENST00000497269 C6orf118Q5T5N4 469 aa9.98□□□□□ -0.81
MSH5-219ENST00000497269 CCDC125Q86Z20 511 aa9.98□□□□□ -0.81
MSH5-219ENST00000497269 PLEKHM2Q8IWE5 1019 aa9.98□□□□□ -0.81
MSH5-219ENST00000497269 ZNF594Q96JF6 807 aaPredicted RBP9.98□□□□□ -0.81
MSH5-219ENST00000497269 AVPP01185 164 aa9.97□□□□□ -0.81
MSH5-219ENST00000497269 FAM9AQ8IZU1 332 aaPredicted RBP9.97□□□□□ -0.81
MSH5-219ENST00000497269 SIRT1Q96EB6 747 aa9.97□□□□□ -0.81
MSH5-219ENST00000497269 VRTNQ9H8Y1 702 aa9.97□□□□□ -0.81
MSH5-219ENST00000497269 PLB1Q6P1J6 1458 aa9.97□□□□□ -0.81
MSH5-219ENST00000497269 COL17A1Q9UMD9 1497 aaPredicted RBP9.97□□□□□ -0.81
MSH5-219ENST00000497269 ZCCHC11Q5TAX3 1644 aaKnown RBP9.96□□□□□ -0.81
MSH5-219ENST00000497269 PPRC1Q5VV67 1664 aaKnown RBP9.96□□□□□ -0.81
MSH5-219ENST00000497269 ADH1AP07327 375 aa9.96□□□□□ -0.82
MSH5-219ENST00000497269 RASA1P20936 1047 aa9.96□□□□□ -0.82
MSH5-219ENST00000497269 OGFOD1Q8N543 542 aa9.96□□□□□ -0.82
MSH5-219ENST00000497269 ARHGEF10LQ9HCE6 1279 aa9.96□□□□□ -0.82
MSH5-219ENST00000497269 ATP5J2-PTCD1G3V325 749 aa9.95□□□□□ -0.82
MSH5-219ENST00000497269 CLDN10P78369 228 aa9.95□□□□□ -0.82
MSH5-219ENST00000497269 CYP2U1Q7Z449 544 aa9.95□□□□□ -0.82
MSH5-219ENST00000497269 MEIOBQ8N635 442 aa9.95□□□□□ -0.82
MSH5-219ENST00000497269 DACH1Q9UI36 760 aa9.95□□□□□ -0.82
MSH5-219ENST00000497269 KIAA1024Q9UPX6 916 aa9.95□□□□□ -0.82
MSH5-219ENST00000497269 EPRSP07814 1512 aaKnown RBP9.95□□□□□ -0.82
MSH5-219ENST00000497269 KIAA0556O60303 1618 aa9.95□□□□□ -0.82
MSH5-219ENST00000497269 UGGT2Q9NYU1 1516 aa9.94□□□□□ -0.82
MSH5-219ENST00000497269 UHRF1BP1LA0JNW5 1464 aa9.94□□□□□ -0.82
MSH5-219ENST00000497269 BMP2P12643 396 aa9.94□□□□□ -0.82
MSH5-219ENST00000497269 CRTC2Q53ET0 693 aaPredicted RBP9.94□□□□□ -0.82
MSH5-219ENST00000497269 KANK4Q5T7N3 995 aaPredicted RBP9.94□□□□□ -0.82
MSH5-219ENST00000497269 LARP1Q6PKG0 1096 aaKnown RBP9.94□□□□□ -0.82
MSH5-219ENST00000497269 Q6ZVU0 165 aa9.94□□□□□ -0.82
MSH5-219ENST00000497269 PURBQ96QR8 312 aaKnown RBP9.94□□□□□ -0.82
MSH5-219ENST00000497269 AAASQ9NRG9 546 aa9.94□□□□□ -0.82
MSH5-219ENST00000497269 DNAAF2Q9NVR5 837 aaKnown RBP9.94□□□□□ -0.82
MSH5-219ENST00000497269 KDM5BQ9UGL1 1544 aa9.93□□□□□ -0.82
MSH5-219ENST00000497269 MEN1O00255 615 aa9.93□□□□□ -0.82
MSH5-219ENST00000497269 LZTS3O60299 673 aaPredicted RBP9.93□□□□□ -0.82
MSH5-219ENST00000497269 UPP2O95045 317 aa9.93□□□□□ -0.82
MSH5-219ENST00000497269 CTC1Q2NKJ3 1217 aa9.93□□□□□ -0.82
MSH5-219ENST00000497269 TRIM50Q86XT4 487 aa9.93□□□□□ -0.82
MSH5-219ENST00000497269 LINC00528Q8N1L1 170 aa9.93□□□□□ -0.82
MSH5-219ENST00000497269 TPCN2Q8NHX9 752 aa9.93□□□□□ -0.82
MSH5-219ENST00000497269 PBXIP1Q96AQ6 731 aa9.93□□□□□ -0.82
MSH5-219ENST00000497269 PCDHGA11Q9Y5H2 935 aa9.93□□□□□ -0.82
MSH5-219ENST00000497269 USP17L15C9J2P7 530 aa9.92□□□□□ -0.82
MSH5-219ENST00000497269 USP17L10C9JJH3 530 aa9.92□□□□□ -0.82
MSH5-219ENST00000497269 USP17L13C9JLJ4 530 aa9.92□□□□□ -0.82
MSH5-219ENST00000497269 USP17L12C9JPN9 530 aa9.92□□□□□ -0.82
MSH5-219ENST00000497269 USP17L11C9JVI0 530 aa9.92□□□□□ -0.82
MSH5-219ENST00000497269 USP17L21D6R901 530 aa9.92□□□□□ -0.82
MSH5-219ENST00000497269 USP17L18D6R9N7 530 aa9.92□□□□□ -0.82
MSH5-219ENST00000497269 USP17L22D6RA61 530 aa9.92□□□□□ -0.82
MSH5-219ENST00000497269 USP17L17D6RBQ6 530 aa9.92□□□□□ -0.82
MSH5-219ENST00000497269 USP17L19D6RCP7 530 aa9.92□□□□□ -0.82
MSH5-219ENST00000497269 USP17L20D6RJB6 530 aa9.92□□□□□ -0.82
MSH5-219ENST00000497269 USP17L24Q0WX57 530 aa9.92□□□□□ -0.82
MSH5-219ENST00000497269 MRPL14Q6P1L8 145 aaKnown RBP9.92□□□□□ -0.82
MSH5-219ENST00000497269 TRIM46Q7Z4K8 759 aa9.92□□□□□ -0.82
MSH5-219ENST00000497269 KDF1Q8NAX2 398 aaPredicted RBP9.92□□□□□ -0.82
MSH5-219ENST00000497269 TRIM52Q96A61 297 aa9.92□□□□□ -0.82
MSH5-219ENST00000497269 GLI2P10070 1586 aa9.92□□□□□ -0.82
MSH5-219ENST00000497269 CTTNBP2Q8WZ74 1663 aa9.91□□□□□ -0.82
MSH5-219ENST00000497269 LGR5O75473 907 aa9.91□□□□□ -0.82
MSH5-219ENST00000497269 PTGIRP43119 386 aa9.91□□□□□ -0.82
MSH5-219ENST00000497269 ATP1A2P50993 1020 aa9.91□□□□□ -0.82
MSH5-219ENST00000497269 SERTAD1Q9UHV2 236 aa9.91□□□□□ -0.82
MSH5-219ENST00000497269 ADGRL1O94910 1474 aa9.91□□□□□ -0.82
MSH5-219ENST00000497269 MAP3K4Q9Y6R4 1608 aa9.9□□□□□ -0.82
MSH5-219ENST00000497269 A0A1W2PRU2 124 aa9.9□□□□□ -0.82
MSH5-219ENST00000497269 GDF10P55107 478 aa9.9□□□□□ -0.82
MSH5-219ENST00000497269 CCDC102BQ68D86 513 aa9.9□□□□□ -0.82
MSH5-219ENST00000497269 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.9□□□□□ -0.82
MSH5-219ENST00000497269 INSM2Q96T92 566 aaPredicted RBP9.9□□□□□ -0.82
MSH5-219ENST00000497269 ETNK1Q9HBU6 452 aa9.9□□□□□ -0.82
MSH5-219ENST00000497269 POLMQ9NP87 494 aaPredicted RBP9.9□□□□□ -0.82
MSH5-219ENST00000497269 ZBTB7BO15156 539 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms