RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 EVC2Q86UK5 1308 aa8.75□□□□□ -1.01
SIK3-213ENST00000497049 DLC1Q96QB1 1528 aa8.75□□□□□ -1.01
SIK3-213ENST00000497049 ROBO2Q9HCK4 1378 aa8.74□□□□□ -1.01
SIK3-213ENST00000497049 STRCQ7RTU9 1775 aa8.74□□□□□ -1.01
SIK3-213ENST00000497049 NCOA3Q9Y6Q9 1424 aa8.74□□□□□ -1.01
SIK3-213ENST00000497049 KCNC4Q03721 635 aa8.74□□□□□ -1.01
SIK3-213ENST00000497049 C19orf44Q9H6X5 657 aa8.74□□□□□ -1.01
SIK3-213ENST00000497049 ASXL1Q8IXJ9 1541 aa8.74□□□□□ -1.01
SIK3-213ENST00000497049 WASLO00401 505 aaPredicted RBP8.73□□□□□ -1.01
SIK3-213ENST00000497049 SAFB2Q14151 953 aaKnown RBP eCLIP8.73□□□□□ -1.01
SIK3-213ENST00000497049 DDRGK1Q96HY6 314 aa8.73□□□□□ -1.01
SIK3-213ENST00000497049 MTRQ99707 1265 aa8.73□□□□□ -1.01
SIK3-213ENST00000497049 REPIN1Q9BWE0 567 aaKnown RBP8.73□□□□□ -1.01
SIK3-213ENST00000497049 CDK19Q9BWU1 502 aa8.73□□□□□ -1.01
SIK3-213ENST00000497049 PTCH1Q13635 1447 aa8.72□□□□□ -1.01
SIK3-213ENST00000497049 IQGAP1P46940 1657 aa8.72□□□□□ -1.01
SIK3-213ENST00000497049 SETD1AO15047 1707 aaKnown RBP8.72□□□□□ -1.01
SIK3-213ENST00000497049 BEGAINQ9BUH8 593 aa8.72□□□□□ -1.01
SIK3-213ENST00000497049 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
SIK3-213ENST00000497049 WASHC2AQ641Q2 1341 aa8.72□□□□□ -1.01
SIK3-213ENST00000497049 PLEKHH1Q9ULM0 1364 aa8.72□□□□□ -1.01
SIK3-213ENST00000497049 FUT2Q10981 343 aa8.71□□□□□ -1.02
SIK3-213ENST00000497049 Q3C1V9 767 aa8.71□□□□□ -1.02
SIK3-213ENST00000497049 TJAP1Q5JTD0 557 aa8.71□□□□□ -1.02
SIK3-213ENST00000497049 KDM4CQ9H3R0 1056 aa8.71□□□□□ -1.02
SIK3-213ENST00000497049 KIF7Q2M1P5 1343 aa8.71□□□□□ -1.02
SIK3-213ENST00000497049 ZNF335Q9H4Z2 1342 aaPredicted RBP8.71□□□□□ -1.02
SIK3-213ENST00000497049 CHD2O14647 1828 aaKnown RBP8.7□□□□□ -1.02
SIK3-213ENST00000497049 GJA5P36382 358 aa8.7□□□□□ -1.02
SIK3-213ENST00000497049 RSPH6AQ9H0K4 717 aa8.7□□□□□ -1.02
SIK3-213ENST00000497049 SALL2Q9Y467 1007 aaPredicted RBP8.7□□□□□ -1.02
SIK3-213ENST00000497049 POLR1AO95602 1720 aaPredicted RBP8.7□□□□□ -1.02
SIK3-213ENST00000497049 CCDC7Q96M83 1385 aa8.7□□□□□ -1.02
SIK3-213ENST00000497049 PLEKHG3A1L390 1219 aa8.69□□□□□ -1.02
SIK3-213ENST00000497049 ZPR1O75312 459 aa8.69□□□□□ -1.02
SIK3-213ENST00000497049 MS4A1P11836 297 aa8.69□□□□□ -1.02
SIK3-213ENST00000497049 SRPK2P78362 688 aaKnown RBP8.69□□□□□ -1.02
SIK3-213ENST00000497049 NEUROD2Q15784 382 aa8.69□□□□□ -1.02
SIK3-213ENST00000497049 MORN1Q5T089 497 aa8.69□□□□□ -1.02
SIK3-213ENST00000497049 BLOC1S3Q6QNY0 202 aa8.69□□□□□ -1.02
SIK3-213ENST00000497049 NUDT16Q96DE0 195 aaKnown RBP8.69□□□□□ -1.02
SIK3-213ENST00000497049 HOXA2O43364 376 aa8.68□□□□□ -1.02
SIK3-213ENST00000497049 COPS2P61201 443 aa8.68□□□□□ -1.02
SIK3-213ENST00000497049 DDX10Q13206 875 aaKnown RBP8.68□□□□□ -1.02
SIK3-213ENST00000497049 C14orf37Q86TY3 774 aa8.68□□□□□ -1.02
SIK3-213ENST00000497049 SLC12A5Q9H2X9 1139 aa8.68□□□□□ -1.02
SIK3-213ENST00000497049 TMEM94Q12767 1356 aa8.68□□□□□ -1.02
SIK3-213ENST00000497049 DISP3Q9P2K9 1392 aa8.68□□□□□ -1.02
SIK3-213ENST00000497049 NKTRP30414 1462 aaKnown RBP8.68□□□□□ -1.02
SIK3-213ENST00000497049 CPS1P31327 1500 aa8.68□□□□□ -1.02
SIK3-213ENST00000497049 ATF3P18847 181 aa8.67□□□□□ -1.02
SIK3-213ENST00000497049 GGCXP38435 758 aa8.67□□□□□ -1.02
SIK3-213ENST00000497049 ATAD2Q6PL18 1390 aa8.67□□□□□ -1.02
SIK3-213ENST00000497049 CABP1Q9NZU7 370 aa8.67□□□□□ -1.02
SIK3-213ENST00000497049 XRN1Q8IZH2 1706 aaKnown RBP8.66□□□□□ -1.02
SIK3-213ENST00000497049 NWD1Q149M9 1564 aa8.66□□□□□ -1.02
SIK3-213ENST00000497049 NINLQ9Y2I6 1382 aa8.66□□□□□ -1.02
SIK3-213ENST00000497049 PER1O15534 1290 aaPredicted RBP8.66□□□□□ -1.02
SIK3-213ENST00000497049 SCUBE3Q8IX30 993 aa8.66□□□□□ -1.02
SIK3-213ENST00000497049 SPIRE2Q8WWL2 714 aa8.66□□□□□ -1.02
SIK3-213ENST00000497049 PANK3Q9H999 370 aa8.66□□□□□ -1.02
SIK3-213ENST00000497049 KNDC1Q76NI1 1749 aa8.66□□□□□ -1.02
SIK3-213ENST00000497049 FMNL1O95466 1100 aaPredicted RBP8.65□□□□□ -1.02
SIK3-213ENST00000497049 TMC1Q8TDI8 760 aa8.65□□□□□ -1.02
SIK3-213ENST00000497049 POLR3GLQ9BT43 218 aa8.65□□□□□ -1.02
SIK3-213ENST00000497049 TBC1D2Q9BYX2 928 aa8.65□□□□□ -1.02
SIK3-213ENST00000497049 GPBP1L1Q9HC44 474 aaPredicted RBP8.65□□□□□ -1.02
SIK3-213ENST00000497049 TERF2IPQ9NYB0 399 aa8.65□□□□□ -1.02
SIK3-213ENST00000497049 SLAIN2Q9P270 581 aa8.65□□□□□ -1.02
SIK3-213ENST00000497049 ARHGEF28Q8N1W1 1705 aaKnown RBP8.65□□□□□ -1.03
SIK3-213ENST00000497049 LRRC7Q96NW7 1537 aa8.64□□□□□ -1.03
SIK3-213ENST00000497049 ADGRL3Q9HAR2 1447 aa8.64□□□□□ -1.03
SIK3-213ENST00000497049 MSH6P52701 1360 aa8.64□□□□□ -1.03
SIK3-213ENST00000497049 PRR36Q9H6K5 1346 aa8.64□□□□□ -1.03
SIK3-213ENST00000497049 PRKCSHP14314 528 aaPredicted RBP8.64□□□□□ -1.03
SIK3-213ENST00000497049 BRPF1P55201 1214 aaPredicted RBP8.64□□□□□ -1.03
SIK3-213ENST00000497049 PUS10Q3MIT2 529 aaKnown RBP8.64□□□□□ -1.03
SIK3-213ENST00000497049 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.63□□□□□ -1.03
SIK3-213ENST00000497049 ADH1BP00325 375 aa8.63□□□□□ -1.03
SIK3-213ENST00000497049 HDGFL2Q7Z4V5 671 aaPredicted RBP8.63□□□□□ -1.03
SIK3-213ENST00000497049 CARD14Q9BXL6 1004 aa8.63□□□□□ -1.03
SIK3-213ENST00000497049 SLC27A5Q9Y2P5 690 aa8.63□□□□□ -1.03
SIK3-213ENST00000497049 DCCP43146 1447 aa8.63□□□□□ -1.03
SIK3-213ENST00000497049 ANKARQ7Z5J8 1434 aa8.63□□□□□ -1.03
SIK3-213ENST00000497049 SPDYE5A6NIY4 337 aa8.62□□□□□ -1.03
SIK3-213ENST00000497049 FDX1P10109 184 aa8.62□□□□□ -1.03
SIK3-213ENST00000497049 TUSC1Q2TAM9 212 aa8.62□□□□□ -1.03
SIK3-213ENST00000497049 ESCO1Q5FWF5 840 aa8.62□□□□□ -1.03
SIK3-213ENST00000497049 SPSB2Q99619 263 aa8.62□□□□□ -1.03
SIK3-213ENST00000497049 GOPCQ9HD26 462 aa8.62□□□□□ -1.03
SIK3-213ENST00000497049 KNSTRNQ9Y448 316 aa8.62□□□□□ -1.03
SIK3-213ENST00000497049 LTBP4Q8N2S1 1624 aa8.62□□□□□ -1.03
SIK3-213ENST00000497049 STRCP1A6NGW2 1772 aa8.61□□□□□ -1.03
SIK3-213ENST00000497049 ACEP12821 1306 aa8.61□□□□□ -1.03
SIK3-213ENST00000497049 TULP4Q9NRJ4 1543 aa8.61□□□□□ -1.03
SIK3-213ENST00000497049 TOM1O60784 492 aa8.61□□□□□ -1.03
SIK3-213ENST00000497049 SH3D19Q5HYK7 790 aa8.61□□□□□ -1.03
SIK3-213ENST00000497049 NGDNQ8NEJ9 315 aaKnown RBP8.61□□□□□ -1.03
SIK3-213ENST00000497049 ORAI2Q96SN7 254 aa8.61□□□□□ -1.03
SIK3-213ENST00000497049 QRICH2Q9H0J4 1663 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms