RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 LAS1LQ9Y4W2 734 aaKnown RBP23.8■■□□□ 1.4
RGP1-202ENST00000496906 CHL1O00533 1208 aa23.79■■□□□ 1.4
RGP1-202ENST00000496906 CABP4P57796 275 aa23.79■■□□□ 1.4
RGP1-202ENST00000496906 DUSP27Q5VZP5 1158 aa23.79■■□□□ 1.4
RGP1-202ENST00000496906 KRT27Q7Z3Y8 459 aa23.79■■□□□ 1.4
RGP1-202ENST00000496906 DOT1LQ8TEK3 1739 aa23.79■■□□□ 1.4
RGP1-202ENST00000496906 NFATC2IPQ8NCF5 419 aa23.78■■□□□ 1.4
RGP1-202ENST00000496906 BABAM1Q9NWV8 329 aa23.78■■□□□ 1.4
RGP1-202ENST00000496906 FANCIQ9NVI1 1328 aa23.78■■□□□ 1.4
RGP1-202ENST00000496906 TSR2Q969E8 191 aaKnown RBP23.78■■□□□ 1.4
RGP1-202ENST00000496906 MBIPQ9NS73 344 aa23.78■■□□□ 1.4
RGP1-202ENST00000496906 FAM182BQ5T319 152 aa23.77■■□□□ 1.4
RGP1-202ENST00000496906 MIS18AQ9NYP9 233 aa23.77■■□□□ 1.4
RGP1-202ENST00000496906 TSPYL4Q9UJ04 414 aa23.76■■□□□ 1.39
RGP1-202ENST00000496906 BTBD11A6QL63 1104 aa23.75■■□□□ 1.39
RGP1-202ENST00000496906 TMOD3Q9NYL9 352 aa23.75■■□□□ 1.39
RGP1-202ENST00000496906 ACSBG1Q96GR2 724 aa23.74■■□□□ 1.39
RGP1-202ENST00000496906 ITGB4P16144 1822 aa23.74■■□□□ 1.39
RGP1-202ENST00000496906 KDM3BQ7LBC6 1761 aa23.74■■□□□ 1.39
RGP1-202ENST00000496906 PRIM1P49642 420 aaKnown RBP23.74■■□□□ 1.39
RGP1-202ENST00000496906 PIGBQ92521 554 aa23.73■■□□□ 1.39
RGP1-202ENST00000496906 SYTL4Q96C24 671 aaPredicted RBP23.72■■□□□ 1.39
RGP1-202ENST00000496906 PAPPAQ13219 1627 aa23.7■■□□□ 1.39
RGP1-202ENST00000496906 FAM196AQ6ZSG2 479 aa23.7■■□□□ 1.38
RGP1-202ENST00000496906 NHSQ6T4R5 1651 aa23.7■■□□□ 1.38
RGP1-202ENST00000496906 KCNQ3O43525 872 aa23.69■■□□□ 1.38
RGP1-202ENST00000496906 KCNQ2O43526 872 aa23.69■■□□□ 1.38
RGP1-202ENST00000496906 SLC39A6Q13433 755 aa23.69■■□□□ 1.38
RGP1-202ENST00000496906 ZNF790Q6PG37 636 aa23.69■■□□□ 1.38
RGP1-202ENST00000496906 ILDR2Q71H61 639 aa23.69■■□□□ 1.38
RGP1-202ENST00000496906 EXOSC9Q06265 439 aaKnown RBP23.68■■□□□ 1.38
RGP1-202ENST00000496906 KAT6BQ8WYB5 2073 aa23.68■■□□□ 1.38
RGP1-202ENST00000496906 EIF4A1P60842 406 aaKnown RBP23.67■■□□□ 1.38
RGP1-202ENST00000496906 SBF2Q86WG5 1849 aa23.67■■□□□ 1.38
RGP1-202ENST00000496906 TTC5Q8N0Z6 440 aa23.66■■□□□ 1.38
RGP1-202ENST00000496906 CENPBP07199 599 aaPredicted RBP23.65■■□□□ 1.38
RGP1-202ENST00000496906 ATG3Q9NT62 314 aa23.65■■□□□ 1.38
RGP1-202ENST00000496906 ASAP1Q9ULH1 1129 aa23.65■■□□□ 1.38
RGP1-202ENST00000496906 KRT24Q2M2I5 525 aa23.65■■□□□ 1.38
RGP1-202ENST00000496906 PTF1AQ7RTS3 328 aa23.65■■□□□ 1.38
RGP1-202ENST00000496906 C8orf58Q8NAV2 365 aa23.65■■□□□ 1.38
RGP1-202ENST00000496906 UBR2Q8IWV8 1755 aa23.64■■□□□ 1.38
RGP1-202ENST00000496906 KCPQ6ZWJ8 1503 aa23.64■■□□□ 1.38
RGP1-202ENST00000496906 HEG1Q9ULI3 1381 aa23.64■■□□□ 1.37
RGP1-202ENST00000496906 TSPYL6Q8N831 410 aa23.63■■□□□ 1.37
RGP1-202ENST00000496906 EP400Q96L91 3159 aa23.62■■□□□ 1.37
RGP1-202ENST00000496906 ZNF496Q96IT1 587 aaPredicted RBP23.62■■□□□ 1.37
RGP1-202ENST00000496906 BCL11BQ9C0K0 894 aaPredicted RBP23.62■■□□□ 1.37
RGP1-202ENST00000496906 BTAF1O14981 1849 aa23.61■■□□□ 1.37
RGP1-202ENST00000496906 CT47B1P0C2W7 299 aaPredicted RBP23.61■■□□□ 1.37
RGP1-202ENST00000496906 TWISTNBQ3B726 338 aaPredicted RBP23.61■■□□□ 1.37
RGP1-202ENST00000496906 FMNL2Q96PY5 1086 aa23.61■■□□□ 1.37
RGP1-202ENST00000496906 ELL2O00472 640 aaPredicted RBP23.6■■□□□ 1.37
RGP1-202ENST00000496906 VAMP4O75379 141 aa23.59■■□□□ 1.37
RGP1-202ENST00000496906 SOS1Q07889 1333 aaPredicted RBP23.59■■□□□ 1.37
RGP1-202ENST00000496906 PALLDQ8WX93 1383 aa23.59■■□□□ 1.37
RGP1-202ENST00000496906 PTCD1O75127 700 aaKnown RBP23.58■■□□□ 1.37
RGP1-202ENST00000496906 GIGYF1O75420 1035 aaPredicted RBP23.58■■□□□ 1.37
RGP1-202ENST00000496906 TRIM37O94972 964 aa23.58■■□□□ 1.37
RGP1-202ENST00000496906 SMARCC1Q92922 1105 aaPredicted RBP23.58■■□□□ 1.37
RGP1-202ENST00000496906 HOXB7P09629 217 aa23.57■■□□□ 1.36
RGP1-202ENST00000496906 PRAMEF22A3QJZ6 481 aa23.55■■□□□ 1.36
RGP1-202ENST00000496906 SNRPA1P09661 255 aaKnown RBP23.55■■□□□ 1.36
RGP1-202ENST00000496906 RBM42Q9BTD8 480 aaKnown RBP23.55■■□□□ 1.36
RGP1-202ENST00000496906 VSIG10Q8N0Z9 540 aa23.54■■□□□ 1.36
RGP1-202ENST00000496906 ZNF428Q96B54 188 aa23.54■■□□□ 1.36
RGP1-202ENST00000496906 SLC4A9Q96Q91 983 aa23.54■■□□□ 1.36
RGP1-202ENST00000496906 RCAN3Q9UKA8 241 aa23.54■■□□□ 1.36
RGP1-202ENST00000496906 C5P01031 1676 aa23.54■■□□□ 1.36
RGP1-202ENST00000496906 LOC102724428A0A0B4J2F2 783 aa23.52■■□□□ 1.36
RGP1-202ENST00000496906 RARSP54136 660 aaKnown RBP23.52■■□□□ 1.36
RGP1-202ENST00000496906 SIK1P57059 783 aa23.52■■□□□ 1.36
RGP1-202ENST00000496906 HDGFL1Q5TGJ6 251 aa23.51■■□□□ 1.35
RGP1-202ENST00000496906 LAMB4A4D0S4 1761 aa23.5■■□□□ 1.35
RGP1-202ENST00000496906 TNS1Q9HBL0 1735 aaKnown RBP23.5■■□□□ 1.35
RGP1-202ENST00000496906 CICQ96RK0 1608 aaPredicted RBP23.5■■□□□ 1.35
RGP1-202ENST00000496906 USP16Q9Y5T5 823 aa23.5■■□□□ 1.35
RGP1-202ENST00000496906 EIF2S2P20042 333 aaKnown RBP23.49■■□□□ 1.35
RGP1-202ENST00000496906 ALDH1L2Q3SY69 923 aa23.49■■□□□ 1.35
RGP1-202ENST00000496906 SSH1Q8WYL5 1049 aa23.49■■□□□ 1.35
RGP1-202ENST00000496906 LY75O60449 1722 aa23.49■■□□□ 1.35
RGP1-202ENST00000496906 ZNF831Q5JPB2 1677 aa23.49■■□□□ 1.35
RGP1-202ENST00000496906 TJP1Q07157 1748 aa23.49■■□□□ 1.35
RGP1-202ENST00000496906 CCDC30Q5VVM6 783 aa23.48■■□□□ 1.35
RGP1-202ENST00000496906 DNAJC10Q8IXB1 793 aa23.48■■□□□ 1.35
RGP1-202ENST00000496906 ATP6V1AP38606 617 aa23.48■■□□□ 1.35
RGP1-202ENST00000496906 NECTIN2Q92692 538 aa23.48■■□□□ 1.35
RGP1-202ENST00000496906 TEX13AQ9BXU3 409 aaPredicted RBP23.48■■□□□ 1.35
RGP1-202ENST00000496906 CHMP4AQ9BY43 222 aa23.48■■□□□ 1.35
RGP1-202ENST00000496906 BCL2L13Q9BXK5 485 aa23.47■■□□□ 1.35
RGP1-202ENST00000496906 TCERG1O14776 1098 aaKnown RBP23.46■■□□□ 1.35
RGP1-202ENST00000496906 BCAR3O75815 825 aa23.46■■□□□ 1.35
RGP1-202ENST00000496906 APBA3O96018 575 aa23.46■■□□□ 1.35
RGP1-202ENST00000496906 SMC4Q9NTJ3 1288 aa23.46■■□□□ 1.35
RGP1-202ENST00000496906 ITPK1Q13572 414 aa23.45■■□□□ 1.34
RGP1-202ENST00000496906 PLSCR1O15162 318 aa23.44■■□□□ 1.34
RGP1-202ENST00000496906 CCNL1Q9UK58 526 aaPredicted RBP23.44■■□□□ 1.34
RGP1-202ENST00000496906 STARD3NLO95772 234 aa23.44■■□□□ 1.34
RGP1-202ENST00000496906 BRPF1P55201 1214 aaPredicted RBP23.44■■□□□ 1.34
RGP1-202ENST00000496906 MRPL50Q8N5N7 158 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms