RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 ZNF853P0CG23 659 aa18.22■□□□□ 0.51
ATPAF2-208ENST00000496852 TEFQ10587 303 aa18.22■□□□□ 0.51
ATPAF2-208ENST00000496852 CDCA7LQ96GN5 454 aa18.22■□□□□ 0.51
ATPAF2-208ENST00000496852 FAM182BQ5T319 152 aa18.22■□□□□ 0.51
ATPAF2-208ENST00000496852 CFAP44Q96MT7 982 aa18.22■□□□□ 0.51
ATPAF2-208ENST00000496852 IFT57Q9NWB7 429 aa18.22■□□□□ 0.51
ATPAF2-208ENST00000496852 GNAI1P63096 354 aa18.21■□□□□ 0.51
ATPAF2-208ENST00000496852 SLFN5Q08AF3 891 aa18.21■□□□□ 0.51
ATPAF2-208ENST00000496852 TAF7Q15545 349 aaPredicted RBP18.21■□□□□ 0.51
ATPAF2-208ENST00000496852 CABP4P57796 275 aa18.2■□□□□ 0.5
ATPAF2-208ENST00000496852 TRMT2AQ8IZ69 625 aaKnown RBP18.2■□□□□ 0.5
ATPAF2-208ENST00000496852 NFATC2IPQ8NCF5 419 aa18.2■□□□□ 0.5
ATPAF2-208ENST00000496852 E9PSI1 815 aa18.19■□□□□ 0.5
ATPAF2-208ENST00000496852 CHL1O00533 1208 aa18.19■□□□□ 0.5
ATPAF2-208ENST00000496852 BABAM1Q9NWV8 329 aa18.18■□□□□ 0.5
ATPAF2-208ENST00000496852 LAS1LQ9Y4W2 734 aaKnown RBP18.18■□□□□ 0.5
ATPAF2-208ENST00000496852 ACSBG1Q96GR2 724 aa18.18■□□□□ 0.5
ATPAF2-208ENST00000496852 TNS1Q9HBL0 1735 aaKnown RBP18.17■□□□□ 0.5
ATPAF2-208ENST00000496852 PRIM1P49642 420 aaKnown RBP18.17■□□□□ 0.5
ATPAF2-208ENST00000496852 MBIPQ9NS73 344 aa18.17■□□□□ 0.5
ATPAF2-208ENST00000496852 TMOD3Q9NYL9 352 aa18.17■□□□□ 0.5
ATPAF2-208ENST00000496852 MIS18AQ9NYP9 233 aa18.17■□□□□ 0.5
ATPAF2-208ENST00000496852 FANCIQ9NVI1 1328 aa18.17■□□□□ 0.5
ATPAF2-208ENST00000496852 BTBD11A6QL63 1104 aa18.16■□□□□ 0.5
ATPAF2-208ENST00000496852 DUSP27Q5VZP5 1158 aa18.16■□□□□ 0.5
ATPAF2-208ENST00000496852 FAM196AQ6ZSG2 479 aa18.16■□□□□ 0.5
ATPAF2-208ENST00000496852 PIGBQ92521 554 aa18.16■□□□□ 0.5
ATPAF2-208ENST00000496852 TSR2Q969E8 191 aaKnown RBP18.16■□□□□ 0.5
ATPAF2-208ENST00000496852 MYH16Q9H6N6 1097 aa18.16■□□□□ 0.5
ATPAF2-208ENST00000496852 LY75O60449 1722 aa18.16■□□□□ 0.5
ATPAF2-208ENST00000496852 C5P01031 1676 aa18.16■□□□□ 0.5
ATPAF2-208ENST00000496852 TSPYL4Q9UJ04 414 aa18.15■□□□□ 0.5
ATPAF2-208ENST00000496852 LAMB4A4D0S4 1761 aa18.15■□□□□ 0.5
ATPAF2-208ENST00000496852 KCNQ2O43526 872 aa18.15■□□□□ 0.5
ATPAF2-208ENST00000496852 SYTL4Q96C24 671 aaPredicted RBP18.15■□□□□ 0.5
ATPAF2-208ENST00000496852 EP400Q96L91 3159 aa18.14■□□□□ 0.5
ATPAF2-208ENST00000496852 KCPQ6ZWJ8 1503 aa18.14■□□□□ 0.5
ATPAF2-208ENST00000496852 ZNF831Q5JPB2 1677 aa18.14■□□□□ 0.49
ATPAF2-208ENST00000496852 CACNA1FO60840 1977 aa18.13■□□□□ 0.49
ATPAF2-208ENST00000496852 CICQ96RK0 1608 aaPredicted RBP18.13■□□□□ 0.49
ATPAF2-208ENST00000496852 KCNQ3O43525 872 aa18.12■□□□□ 0.49
ATPAF2-208ENST00000496852 SLC39A6Q13433 755 aa18.12■□□□□ 0.49
ATPAF2-208ENST00000496852 ZNF790Q6PG37 636 aa18.12■□□□□ 0.49
ATPAF2-208ENST00000496852 TJP1Q07157 1748 aa18.12■□□□□ 0.49
ATPAF2-208ENST00000496852 PTF1AQ7RTS3 328 aa18.12■□□□□ 0.49
ATPAF2-208ENST00000496852 TAF1LQ8IZX4 1826 aa18.11■□□□□ 0.49
ATPAF2-208ENST00000496852 ATG3Q9NT62 314 aa18.11■□□□□ 0.49
ATPAF2-208ENST00000496852 HEG1Q9ULI3 1381 aa18.1■□□□□ 0.49
ATPAF2-208ENST00000496852 RGPD3A6NKT7 1758 aaPredicted RBP18.1■□□□□ 0.49
ATPAF2-208ENST00000496852 RGPD4Q7Z3J3 1758 aa18.1■□□□□ 0.49
ATPAF2-208ENST00000496852 EIF4A1P60842 406 aaKnown RBP18.1■□□□□ 0.49
ATPAF2-208ENST00000496852 ASAP1Q9ULH1 1129 aa18.1■□□□□ 0.49
ATPAF2-208ENST00000496852 COL5A3P25940 1745 aaPredicted RBP18.09■□□□□ 0.49
ATPAF2-208ENST00000496852 EXOSC9Q06265 439 aaKnown RBP18.09■□□□□ 0.49
ATPAF2-208ENST00000496852 BCL11BQ9C0K0 894 aaPredicted RBP18.09■□□□□ 0.49
ATPAF2-208ENST00000496852 TTC5Q8N0Z6 440 aa18.09■□□□□ 0.49
ATPAF2-208ENST00000496852 KRT24Q2M2I5 525 aa18.08■□□□□ 0.48
ATPAF2-208ENST00000496852 ZNF496Q96IT1 587 aaPredicted RBP18.08■□□□□ 0.48
ATPAF2-208ENST00000496852 TRIM37O94972 964 aa18.07■□□□□ 0.48
ATPAF2-208ENST00000496852 C8orf58Q8NAV2 365 aa18.07■□□□□ 0.48
ATPAF2-208ENST00000496852 TSPYL6Q8N831 410 aa18.06■□□□□ 0.48
ATPAF2-208ENST00000496852 FMNL2Q96PY5 1086 aa18.06■□□□□ 0.48
ATPAF2-208ENST00000496852 PALLDQ8WX93 1383 aa18.06■□□□□ 0.48
ATPAF2-208ENST00000496852 SMARCC1Q92922 1105 aaPredicted RBP18.05■□□□□ 0.48
ATPAF2-208ENST00000496852 ELL2O00472 640 aaPredicted RBP18.04■□□□□ 0.48
ATPAF2-208ENST00000496852 PTCD1O75127 700 aaKnown RBP18.04■□□□□ 0.48
ATPAF2-208ENST00000496852 GIGYF1O75420 1035 aaPredicted RBP18.04■□□□□ 0.48
ATPAF2-208ENST00000496852 TWISTNBQ3B726 338 aaPredicted RBP18.04■□□□□ 0.48
ATPAF2-208ENST00000496852 MYH14Q7Z406 1995 aaKnown RBP18.03■□□□□ 0.48
ATPAF2-208ENST00000496852 SOS1Q07889 1333 aaPredicted RBP18.03■□□□□ 0.48
ATPAF2-208ENST00000496852 VAMP4O75379 141 aa18.03■□□□□ 0.48
ATPAF2-208ENST00000496852 HOXB7P09629 217 aa18.03■□□□□ 0.48
ATPAF2-208ENST00000496852 CT47B1P0C2W7 299 aaPredicted RBP18.03■□□□□ 0.48
ATPAF2-208ENST00000496852 VSIG10Q8N0Z9 540 aa18.03■□□□□ 0.48
ATPAF2-208ENST00000496852 SLC4A9Q96Q91 983 aa18.03■□□□□ 0.48
ATPAF2-208ENST00000496852 RREB1Q92766 1687 aa18.02■□□□□ 0.48
ATPAF2-208ENST00000496852 PRAMEF22A3QJZ6 481 aa18.02■□□□□ 0.47
ATPAF2-208ENST00000496852 RBM42Q9BTD8 480 aaKnown RBP18.02■□□□□ 0.47
ATPAF2-208ENST00000496852 SNRPA1P09661 255 aaKnown RBP18.01■□□□□ 0.47
ATPAF2-208ENST00000496852 LOC102724428A0A0B4J2F2 783 aa18■□□□□ 0.47
ATPAF2-208ENST00000496852 SIK1P57059 783 aa18■□□□□ 0.47
ATPAF2-208ENST00000496852 ZNF428Q96B54 188 aa17.99■□□□□ 0.47
ATPAF2-208ENST00000496852 PLSCR1O15162 318 aa17.98■□□□□ 0.47
ATPAF2-208ENST00000496852 USP16Q9Y5T5 823 aa17.98■□□□□ 0.47
ATPAF2-208ENST00000496852 APBA3O96018 575 aa17.97■□□□□ 0.47
ATPAF2-208ENST00000496852 ATP6V1AP38606 617 aa17.97■□□□□ 0.47
ATPAF2-208ENST00000496852 DNAJC10Q8IXB1 793 aa17.97■□□□□ 0.47
ATPAF2-208ENST00000496852 C4BP0C0L5 1744 aa17.97■□□□□ 0.47
ATPAF2-208ENST00000496852 TEX13AQ9BXU3 409 aaPredicted RBP17.96■□□□□ 0.47
ATPAF2-208ENST00000496852 EIF2S2P20042 333 aaKnown RBP17.96■□□□□ 0.47
ATPAF2-208ENST00000496852 RARSP54136 660 aaKnown RBP17.96■□□□□ 0.47
ATPAF2-208ENST00000496852 ITPK1Q13572 414 aa17.96■□□□□ 0.47
ATPAF2-208ENST00000496852 HDGFL1Q5TGJ6 251 aa17.96■□□□□ 0.47
ATPAF2-208ENST00000496852 RCAN3Q9UKA8 241 aa17.96■□□□□ 0.47
ATPAF2-208ENST00000496852 UBR3Q6ZT12 1888 aa17.96■□□□□ 0.47
ATPAF2-208ENST00000496852 ALDH1L2Q3SY69 923 aa17.95■□□□□ 0.46
ATPAF2-208ENST00000496852 CCDC30Q5VVM6 783 aa17.95■□□□□ 0.46
ATPAF2-208ENST00000496852 CCNL1Q9UK58 526 aaPredicted RBP17.95■□□□□ 0.46
ATPAF2-208ENST00000496852 NUP188Q5SRE5 1749 aa17.95■□□□□ 0.46
ATPAF2-208ENST00000496852 CYP19A1P11511 503 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms