RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 MRC1P22897 1456 aa27.7■■■□□ 2.02
COL9A2-211ENST00000496215 LOC102724428A0A0B4J2F2 783 aa27.69■■■□□ 2.02
COL9A2-211ENST00000496215 SIK1P57059 783 aa27.69■■■□□ 2.02
COL9A2-211ENST00000496215 CABP4P57796 275 aa27.68■■■□□ 2.02
COL9A2-211ENST00000496215 ITPK1Q13572 414 aa27.68■■■□□ 2.02
COL9A2-211ENST00000496215 COL23A1Q86Y22 540 aaPredicted RBP27.68■■■□□ 2.02
COL9A2-211ENST00000496215 LINC00116Q8NCU8 138 aa27.67■■■□□ 2.02
COL9A2-211ENST00000496215 SLC4A9Q96Q91 983 aa27.67■■■□□ 2.02
COL9A2-211ENST00000496215 NUDCQ9Y266 331 aa27.67■■■□□ 2.02
COL9A2-211ENST00000496215 DDX10Q13206 875 aaKnown RBP27.66■■■□□ 2.02
COL9A2-211ENST00000496215 SMIM5Q71RC9 77 aa27.66■■■□□ 2.02
COL9A2-211ENST00000496215 COL5A3P25940 1745 aaPredicted RBP27.66■■■□□ 2.02
COL9A2-211ENST00000496215 MTHFSDQ2M296 383 aaKnown RBP27.65■■■□□ 2.02
COL9A2-211ENST00000496215 SLC16A10Q8TF71 515 aa27.64■■■□□ 2.02
COL9A2-211ENST00000496215 LGR6Q9HBX8 967 aa27.63■■■□□ 2.01
COL9A2-211ENST00000496215 CICQ96RK0 1608 aaPredicted RBP27.63■■■□□ 2.01
COL9A2-211ENST00000496215 NFATC2IPQ8NCF5 419 aa27.62■■■□□ 2.01
COL9A2-211ENST00000496215 FHDC1Q9C0D6 1143 aaPredicted RBP27.62■■■□□ 2.01
COL9A2-211ENST00000496215 MAP3K5Q99683 1374 aa27.61■■■□□ 2.01
COL9A2-211ENST00000496215 ATP6V1AP38606 617 aa27.61■■■□□ 2.01
COL9A2-211ENST00000496215 AK7Q96M32 723 aa27.61■■■□□ 2.01
COL9A2-211ENST00000496215 TJP1Q07157 1748 aa27.61■■■□□ 2.01
COL9A2-211ENST00000496215 U2AF1L5P0DN76 240 aaPredicted RBP27.6■■■□□ 2.01
COL9A2-211ENST00000496215 PRKAR2BP31323 418 aa27.6■■■□□ 2.01
COL9A2-211ENST00000496215 U2AF1Q01081 240 aaKnown RBP eCLIP27.6■■■□□ 2.01
COL9A2-211ENST00000496215 GAS2L2Q8NHY3 880 aa27.6■■■□□ 2.01
COL9A2-211ENST00000496215 ARXQ96QS3 562 aa27.6■■■□□ 2.01
COL9A2-211ENST00000496215 RSPH6AQ9H0K4 717 aa27.6■■■□□ 2.01
COL9A2-211ENST00000496215 RNMTO43148 476 aaKnown RBP27.58■■■□□ 2.01
COL9A2-211ENST00000496215 RALBP1Q15311 655 aa27.58■■■□□ 2.01
COL9A2-211ENST00000496215 MSH5O43196 834 aa27.57■■■□□ 2
COL9A2-211ENST00000496215 MSL1Q68DK7 614 aa27.57■■■□□ 2
COL9A2-211ENST00000496215 SYT17Q9BSW7 474 aa27.57■■■□□ 2
COL9A2-211ENST00000496215 RBM42Q9BTD8 480 aaKnown RBP27.57■■■□□ 2
COL9A2-211ENST00000496215 SLC52A2Q9HAB3 445 aa27.57■■■□□ 2
COL9A2-211ENST00000496215 MYH14Q7Z406 1995 aaKnown RBP27.57■■■□□ 2
COL9A2-211ENST00000496215 SIPA1L3O60292 1781 aaPredicted RBP27.56■■■□□ 2
COL9A2-211ENST00000496215 PHF14O94880 888 aa27.55■■■□□ 2
COL9A2-211ENST00000496215 FLAD1Q8NFF5 587 aa27.55■■■□□ 2
COL9A2-211ENST00000496215 UBR2Q8IWV8 1755 aa27.55■■■□□ 2
COL9A2-211ENST00000496215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.54■■■□□ 2
COL9A2-211ENST00000496215 UTRNP46939 3433 aa27.54■■■□□ 2
COL9A2-211ENST00000496215 PHACTR3Q96KR7 559 aa27.54■■■□□ 2
COL9A2-211ENST00000496215 KCPQ6ZWJ8 1503 aa27.53■■■□□ 2
COL9A2-211ENST00000496215 GNAT3A8MTJ3 354 aa27.53■■■□□ 2
COL9A2-211ENST00000496215 PTCD1O75127 700 aaKnown RBP27.53■■■□□ 2
COL9A2-211ENST00000496215 GNPATO15228 680 aa27.52■■■□□ 2
COL9A2-211ENST00000496215 FCHSD2O94868 740 aa27.52■■■□□ 2
COL9A2-211ENST00000496215 SSFA2P28290 1259 aa27.51■■□□□ 1.99
COL9A2-211ENST00000496215 MYBBP1AQ9BQG0 1328 aaKnown RBP27.5■■□□□ 1.99
COL9A2-211ENST00000496215 POLD1P28340 1107 aa27.5■■□□□ 1.99
COL9A2-211ENST00000496215 C4AP0C0L4 1744 aa27.5■■□□□ 1.99
COL9A2-211ENST00000496215 GOLGB1Q14789 3259 aaKnown RBP27.49■■□□□ 1.99
COL9A2-211ENST00000496215 SLC39A6Q13433 755 aa27.49■■□□□ 1.99
COL9A2-211ENST00000496215 CNTNAP4Q9C0A0 1308 aa27.48■■□□□ 1.99
COL9A2-211ENST00000496215 IL17REQ8NFR9 667 aa27.48■■□□□ 1.99
COL9A2-211ENST00000496215 TEFQ10587 303 aa27.47■■□□□ 1.99
COL9A2-211ENST00000496215 CEMIPQ8WUJ3 1361 aa27.46■■□□□ 1.99
COL9A2-211ENST00000496215 NEFMP07197 916 aa27.45■■□□□ 1.98
COL9A2-211ENST00000496215 RC3H1Q5TC82 1133 aaKnown RBP27.45■■□□□ 1.98
COL9A2-211ENST00000496215 DLG5Q8TDM6 1919 aa27.45■■□□□ 1.98
COL9A2-211ENST00000496215 KLHL34Q8N239 644 aa27.44■■□□□ 1.98
COL9A2-211ENST00000496215 NLGN2Q8NFZ4 835 aa27.44■■□□□ 1.98
COL9A2-211ENST00000496215 CRKLP46109 303 aaKnown RBP27.42■■□□□ 1.98
COL9A2-211ENST00000496215 TTC5Q8N0Z6 440 aa27.42■■□□□ 1.98
COL9A2-211ENST00000496215 RTCBQ9Y3I0 505 aaKnown RBP27.42■■□□□ 1.98
COL9A2-211ENST00000496215 DNAJC10Q8IXB1 793 aa27.41■■□□□ 1.98
COL9A2-211ENST00000496215 RTF1Q92541 710 aaKnown RBP27.41■■□□□ 1.98
COL9A2-211ENST00000496215 RPS6KA4O75676 772 aa27.4■■□□□ 1.98
COL9A2-211ENST00000496215 ARHGEF1Q92888 912 aaKnown RBP27.4■■□□□ 1.98
COL9A2-211ENST00000496215 INTS5Q6P9B9 1019 aaKnown RBP27.39■■□□□ 1.98
COL9A2-211ENST00000496215 PNNQ9H307 717 aaKnown RBP27.39■■□□□ 1.98
COL9A2-211ENST00000496215 MAPK8IP3Q9UPT6 1336 aa27.39■■□□□ 1.97
COL9A2-211ENST00000496215 ADRA2BP18089 450 aa27.38■■□□□ 1.97
COL9A2-211ENST00000496215 PRKRIP1Q9H875 184 aaPredicted RBP27.38■■□□□ 1.97
COL9A2-211ENST00000496215 TRAPPC3LQ5T215 181 aa27.37■■□□□ 1.97
COL9A2-211ENST00000496215 MCM10Q7L590 875 aa27.36■■□□□ 1.97
COL9A2-211ENST00000496215 VSIG10Q8N0Z9 540 aa27.36■■□□□ 1.97
COL9A2-211ENST00000496215 PLEKHF1Q96S99 279 aa27.36■■□□□ 1.97
COL9A2-211ENST00000496215 HTATSF1O43719 755 aaKnown RBP27.35■■□□□ 1.97
COL9A2-211ENST00000496215 CYP19A1P11511 503 aaPredicted RBP27.35■■□□□ 1.97
COL9A2-211ENST00000496215 ZNF790Q6PG37 636 aa27.35■■□□□ 1.97
COL9A2-211ENST00000496215 ZNF316A6NFI3 1004 aaPredicted RBP27.34■■□□□ 1.97
COL9A2-211ENST00000496215 DCAF8L1A6NGE4 600 aa27.33■■□□□ 1.97
COL9A2-211ENST00000496215 BTBD11A6QL63 1104 aa27.33■■□□□ 1.97
COL9A2-211ENST00000496215 GYS1P13807 737 aa27.33■■□□□ 1.97
COL9A2-211ENST00000496215 ZNF496Q96IT1 587 aaPredicted RBP27.33■■□□□ 1.97
COL9A2-211ENST00000496215 CCDC87Q9NVE4 849 aa27.33■■□□□ 1.97
COL9A2-211ENST00000496215 KCNQ3O43525 872 aa27.32■■□□□ 1.96
COL9A2-211ENST00000496215 DCTN1Q14203 1278 aa27.32■■□□□ 1.96
COL9A2-211ENST00000496215 SRP68Q9UHB9 627 aaKnown RBP27.32■■□□□ 1.96
COL9A2-211ENST00000496215 KIAA1551Q9HCM1 1747 aa27.32■■□□□ 1.96
COL9A2-211ENST00000496215 HEG1Q9ULI3 1381 aa27.32■■□□□ 1.96
COL9A2-211ENST00000496215 KDM3BQ7LBC6 1761 aa27.31■■□□□ 1.96
COL9A2-211ENST00000496215 RFC4P35249 363 aa27.31■■□□□ 1.96
COL9A2-211ENST00000496215 NFE2L2Q16236 605 aa27.31■■□□□ 1.96
COL9A2-211ENST00000496215 KIF13BQ9NQT8 1826 aa27.31■■□□□ 1.96
COL9A2-211ENST00000496215 MMP10P09238 476 aa27.3■■□□□ 1.96
COL9A2-211ENST00000496215 WDR43Q15061 677 aaKnown RBP eCLIP27.3■■□□□ 1.96
COL9A2-211ENST00000496215 FMNL2Q96PY5 1086 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms