RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 PDZRN3Q9UPQ7 1066 aa10.95□□□□□ -0.66
VPS13B-206ENST00000496144 TRMT2AQ8IZ69 625 aaKnown RBP10.95□□□□□ -0.66
VPS13B-206ENST00000496144 DUSP27Q5VZP5 1158 aa10.94□□□□□ -0.66
VPS13B-206ENST00000496144 AXIN2Q9Y2T1 843 aa10.94□□□□□ -0.66
VPS13B-206ENST00000496144 ADRA2BP18089 450 aa10.94□□□□□ -0.66
VPS13B-206ENST00000496144 AKAP4Q5JQC9 854 aa10.94□□□□□ -0.66
VPS13B-206ENST00000496144 CCDC146Q8IYE0 955 aa10.94□□□□□ -0.66
VPS13B-206ENST00000496144 ABCC6O95255 1503 aa10.94□□□□□ -0.66
VPS13B-206ENST00000496144 SOGA3Q5TF21 947 aa10.93□□□□□ -0.66
VPS13B-206ENST00000496144 NBPF6Q5VWK0 638 aa10.93□□□□□ -0.66
VPS13B-206ENST00000496144 NBPF4Q96M43 638 aa10.93□□□□□ -0.66
VPS13B-206ENST00000496144 GLI3P10071 1580 aa10.93□□□□□ -0.66
VPS13B-206ENST00000496144 SLFN5Q08AF3 891 aa10.93□□□□□ -0.66
VPS13B-206ENST00000496144 FHDC1Q9C0D6 1143 aaPredicted RBP10.93□□□□□ -0.66
VPS13B-206ENST00000496144 GNAT3A8MTJ3 354 aa10.93□□□□□ -0.66
VPS13B-206ENST00000496144 HMOX1P09601 288 aa10.93□□□□□ -0.66
VPS13B-206ENST00000496144 ZNF622Q969S3 477 aaKnown RBP eCLIP10.93□□□□□ -0.669e-7■■■□□ 17.7
VPS13B-206ENST00000496144 CCDC136Q96JN2 1154 aa10.93□□□□□ -0.66
VPS13B-206ENST00000496144 LAS1LQ9Y4W2 734 aaKnown RBP10.93□□□□□ -0.66
VPS13B-206ENST00000496144 NRKQ7Z2Y5 1582 aa10.93□□□□□ -0.66
VPS13B-206ENST00000496144 LOC102724428A0A0B4J2F2 783 aa10.93□□□□□ -0.66
VPS13B-206ENST00000496144 SIK1P57059 783 aa10.93□□□□□ -0.66
VPS13B-206ENST00000496144 GOLGA2Q08379 1002 aa10.93□□□□□ -0.66
VPS13B-206ENST00000496144 BICDL1Q6ZP65 573 aa10.93□□□□□ -0.66
VPS13B-206ENST00000496144 NGEFQ8N5V2 710 aa10.93□□□□□ -0.66
VPS13B-206ENST00000496144 DPY19L2Q6NUT2 758 aa10.92□□□□□ -0.66
VPS13B-206ENST00000496144 EXOC6Q8TAG9 804 aa10.92□□□□□ -0.66
VPS13B-206ENST00000496144 CD2APQ9Y5K6 639 aa10.92□□□□□ -0.66
VPS13B-206ENST00000496144 H0YIN7 160 aa10.92□□□□□ -0.66
VPS13B-206ENST00000496144 FMNL2Q96PY5 1086 aa10.92□□□□□ -0.66
VPS13B-206ENST00000496144 KDM2BQ8NHM5 1336 aa10.91□□□□□ -0.66
VPS13B-206ENST00000496144 KAT6BQ8WYB5 2073 aa10.91□□□□□ -0.66
VPS13B-206ENST00000496144 DALRD3Q5D0E6 543 aaKnown RBP10.91□□□□□ -0.66
VPS13B-206ENST00000496144 FANCIQ9NVI1 1328 aa10.91□□□□□ -0.66
VPS13B-206ENST00000496144 CAMTA1Q9Y6Y1 1673 aa10.9□□□□□ -0.66
VPS13B-206ENST00000496144 BTBD11A6QL63 1104 aa10.9□□□□□ -0.66
VPS13B-206ENST00000496144 SLIT3O75094 1523 aa10.9□□□□□ -0.66
VPS13B-206ENST00000496144 CANXP27824 592 aaKnown RBP10.9□□□□□ -0.66
VPS13B-206ENST00000496144 SETDB2Q96T68 719 aa10.9□□□□□ -0.66
VPS13B-206ENST00000496144 EYA1Q99502 592 aa10.9□□□□□ -0.66
VPS13B-206ENST00000496144 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.9□□□□□ -0.67
VPS13B-206ENST00000496144 PDE6BP35913 854 aa10.9□□□□□ -0.67
VPS13B-206ENST00000496144 PHRF1Q9P1Y6 1649 aaKnown RBP10.89□□□□□ -0.67
VPS13B-206ENST00000496144 DISP2A7MBM2 1401 aa10.89□□□□□ -0.67
VPS13B-206ENST00000496144 PHKG2P15735 406 aa10.89□□□□□ -0.67
VPS13B-206ENST00000496144 EIF4A2Q14240 407 aaKnown RBP10.89□□□□□ -0.67
VPS13B-206ENST00000496144 ZNF526Q8TF50 670 aaPredicted RBP10.89□□□□□ -0.67
VPS13B-206ENST00000496144 PIM2Q9P1W9 311 aa10.89□□□□□ -0.67
VPS13B-206ENST00000496144 RGPD8O14715 1765 aaPredicted RBP10.89□□□□□ -0.67
VPS13B-206ENST00000496144 E9PSI1 815 aa10.88□□□□□ -0.67
VPS13B-206ENST00000496144 APAF1O14727 1248 aa10.88□□□□□ -0.67
VPS13B-206ENST00000496144 RPGRQ92834 1020 aaKnown RBP10.88□□□□□ -0.67
VPS13B-206ENST00000496144 RUNDC1Q96C34 613 aa10.88□□□□□ -0.67
VPS13B-206ENST00000496144 NCBP3Q53F19 620 aaKnown RBP10.88□□□□□ -0.67
VPS13B-206ENST00000496144 LMOD1P29536 600 aaPredicted RBP10.88□□□□□ -0.67
VPS13B-206ENST00000496144 NYXQ9GZU5 481 aa10.88□□□□□ -0.67
VPS13B-206ENST00000496144 PLIN1O60240 522 aa10.87□□□□□ -0.67
VPS13B-206ENST00000496144 CRBNQ96SW2 442 aa10.87□□□□□ -0.67
VPS13B-206ENST00000496144 SYT17Q9BSW7 474 aa10.87□□□□□ -0.67
VPS13B-206ENST00000496144 CLEC11AQ9Y240 323 aa10.87□□□□□ -0.67
VPS13B-206ENST00000496144 ALS2Q96Q42 1657 aa10.87□□□□□ -0.67
VPS13B-206ENST00000496144 AIDAQ96BJ3 306 aa10.86□□□□□ -0.67
VPS13B-206ENST00000496144 PAXIP1Q6ZW49 1069 aaPredicted RBP10.86□□□□□ -0.67
VPS13B-206ENST00000496144 SPINK5Q9NQ38 1064 aaPredicted RBP10.86□□□□□ -0.67
VPS13B-206ENST00000496144 POLKQ9UBT6 870 aa10.86□□□□□ -0.67
VPS13B-206ENST00000496144 NBPF5PQ86XG9 351 aaPredicted RBP10.86□□□□□ -0.67
VPS13B-206ENST00000496144 BEGAINQ9BUH8 593 aa10.86□□□□□ -0.67
VPS13B-206ENST00000496144 TGFB2P61812 414 aa10.86□□□□□ -0.67
VPS13B-206ENST00000496144 WWC1Q8IX03 1113 aa10.86□□□□□ -0.67
VPS13B-206ENST00000496144 CCDC27Q2M243 656 aa10.85□□□□□ -0.67
VPS13B-206ENST00000496144 MAP3K5Q99683 1374 aa10.85□□□□□ -0.67
VPS13B-206ENST00000496144 TRPM3Q9HCF6 1732 aaPredicted RBP10.85□□□□□ -0.67
VPS13B-206ENST00000496144 RPS6KA4O75676 772 aa10.85□□□□□ -0.67
VPS13B-206ENST00000496144 MMP10P09238 476 aa10.85□□□□□ -0.67
VPS13B-206ENST00000496144 HSP90AB3PQ58FF7 597 aa10.85□□□□□ -0.67
VPS13B-206ENST00000496144 RC3H1Q5TC82 1133 aaKnown RBP10.85□□□□□ -0.67
VPS13B-206ENST00000496144 WWC3Q9ULE0 1092 aa10.85□□□□□ -0.67
VPS13B-206ENST00000496144 MAP2P11137 1827 aaKnown RBP10.84□□□□□ -0.67
VPS13B-206ENST00000496144 JDP2Q8WYK2 163 aa10.84□□□□□ -0.67
VPS13B-206ENST00000496144 IGSF1Q8N6C5 1336 aa10.84□□□□□ -0.67
VPS13B-206ENST00000496144 C2CD5Q86YS7 1000 aa10.84□□□□□ -0.67
VPS13B-206ENST00000496144 CNKSR1Q969H4 720 aa10.84□□□□□ -0.67
VPS13B-206ENST00000496144 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.84□□□□□ -0.67
VPS13B-206ENST00000496144 DDX58O95786 925 aaKnown RBP10.83□□□□□ -0.67
VPS13B-206ENST00000496144 PRKAR2BP31323 418 aa10.83□□□□□ -0.67
VPS13B-206ENST00000496144 C20orf194Q5TEA3 1177 aa10.83□□□□□ -0.67
VPS13B-206ENST00000496144 CNBD1Q8NA66 436 aa10.83□□□□□ -0.67
VPS13B-206ENST00000496144 NFATC2IPQ8NCF5 419 aa10.83□□□□□ -0.67
VPS13B-206ENST00000496144 STK31Q9BXU1 1019 aa10.83□□□□□ -0.67
VPS13B-206ENST00000496144 RNMTO43148 476 aaKnown RBP10.83□□□□□ -0.68
VPS13B-206ENST00000496144 PIGBQ92521 554 aa10.83□□□□□ -0.68
VPS13B-206ENST00000496144 TSPYL4Q9UJ04 414 aa10.83□□□□□ -0.68
VPS13B-206ENST00000496144 FBLN1P23142 703 aa10.83□□□□□ -0.68
VPS13B-206ENST00000496144 TPTE2Q6XPS3 522 aa10.83□□□□□ -0.68
VPS13B-206ENST00000496144 ZNF219Q9P2Y4 722 aaPredicted RBP10.83□□□□□ -0.68
VPS13B-206ENST00000496144 NEUROD2Q15784 382 aa10.83□□□□□ -0.68
VPS13B-206ENST00000496144 WDR63Q8IWG1 891 aa10.83□□□□□ -0.68
VPS13B-206ENST00000496144 PLEKHF1Q96S99 279 aa10.83□□□□□ -0.68
VPS13B-206ENST00000496144 SLC52A2Q9HAB3 445 aa10.83□□□□□ -0.68
VPS13B-206ENST00000496144 VIRMAQ69YN4 1812 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms