RNA–Protein interactions for RNA: ENST00000496100.1

U2SURP-216, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 4

Gene U2SURP, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-216ENST00000496100 MTFR1Q15390 333 aa8.42□□□□□ -1.06
U2SURP-216ENST00000496100 OGFOD1Q8N543 542 aa8.42□□□□□ -1.06
U2SURP-216ENST00000496100 NLRP3Q96P20 1036 aa8.42□□□□□ -1.06
U2SURP-216ENST00000496100 FHDC1Q9C0D6 1143 aaPredicted RBP8.42□□□□□ -1.06
U2SURP-216ENST00000496100 DNAAF2Q9NVR5 837 aaKnown RBP8.42□□□□□ -1.06
U2SURP-216ENST00000496100 DNMT3LQ9UJW3 386 aa8.42□□□□□ -1.06
U2SURP-216ENST00000496100 SNRPBP14678 240 aaKnown RBP8.41□□□□□ -1.06
U2SURP-216ENST00000496100 PTK7Q13308 1070 aa8.41□□□□□ -1.06
U2SURP-216ENST00000496100 ELOAQ14241 798 aaKnown RBP8.41□□□□□ -1.06
U2SURP-216ENST00000496100 CRTC2Q53ET0 693 aaPredicted RBP8.41□□□□□ -1.06
U2SURP-216ENST00000496100 ZNF775Q96BV0 537 aaPredicted RBP8.41□□□□□ -1.06
U2SURP-216ENST00000496100 POLMQ9NP87 494 aaPredicted RBP8.41□□□□□ -1.06
U2SURP-216ENST00000496100 BACH1O14867 736 aa8.4□□□□□ -1.06
U2SURP-216ENST00000496100 RASA1P20936 1047 aa8.4□□□□□ -1.06
U2SURP-216ENST00000496100 CENPCQ03188 943 aa8.4□□□□□ -1.06
U2SURP-216ENST00000496100 CCDC102BQ68D86 513 aa8.4□□□□□ -1.06
U2SURP-216ENST00000496100 AEBP1Q8IUX7 1158 aa8.4□□□□□ -1.06
U2SURP-216ENST00000496100 NPAS3Q8IXF0 933 aa8.4□□□□□ -1.06
U2SURP-216ENST00000496100 ZMIZ1Q9ULJ6 1067 aa8.4□□□□□ -1.06
U2SURP-216ENST00000496100 USP17L15C9J2P7 530 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 USP17L10C9JJH3 530 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 USP17L13C9JLJ4 530 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 USP17L12C9JPN9 530 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 USP17L11C9JVI0 530 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 USP17L21D6R901 530 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 USP17L18D6R9N7 530 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 USP17L22D6RA61 530 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 USP17L17D6RBQ6 530 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 USP17L19D6RCP7 530 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 USP17L20D6RJB6 530 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 MAN1A2O60476 641 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 USP17L24Q0WX57 530 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 LARP1Q6PKG0 1096 aaKnown RBP8.39□□□□□ -1.07
U2SURP-216ENST00000496100 LYSMD3Q7Z3D4 306 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 STK32AQ8WU08 396 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 NOVA2Q9UNW9 492 aaKnown RBP8.39□□□□□ -1.07
U2SURP-216ENST00000496100 KIAA1024Q9UPX6 916 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 USTQ9Y2C2 406 aa8.39□□□□□ -1.07
U2SURP-216ENST00000496100 TMEM88BA6NKF7 163 aa8.38□□□□□ -1.07
U2SURP-216ENST00000496100 MEN1O00255 615 aa8.38□□□□□ -1.07
U2SURP-216ENST00000496100 SMTNP53814 917 aa8.38□□□□□ -1.07
U2SURP-216ENST00000496100 EPHA4P54764 986 aa8.38□□□□□ -1.07
U2SURP-216ENST00000496100 PPARGC1BQ86YN6 1023 aaKnown RBP8.38□□□□□ -1.07
U2SURP-216ENST00000496100 ZNF594Q96JF6 807 aaPredicted RBP8.38□□□□□ -1.07
U2SURP-216ENST00000496100 RAB6BQ9NRW1 208 aa8.38□□□□□ -1.07
U2SURP-216ENST00000496100 ZNF358Q9NW07 568 aa8.38□□□□□ -1.07
U2SURP-216ENST00000496100 PODXL2Q9NZ53 605 aa8.38□□□□□ -1.07
U2SURP-216ENST00000496100 TMEM164Q5U3C3 297 aa8.37□□□□□ -1.07
U2SURP-216ENST00000496100 TPCN2Q8NHX9 752 aa8.37□□□□□ -1.07
U2SURP-216ENST00000496100 CDK2AP1O14519 115 aa8.36□□□□□ -1.07
U2SURP-216ENST00000496100 FOXK2Q01167 660 aa8.36□□□□□ -1.07
U2SURP-216ENST00000496100 PSME1Q06323 249 aa8.36□□□□□ -1.07
U2SURP-216ENST00000496100 PDE4CQ08493 712 aa8.36□□□□□ -1.07
U2SURP-216ENST00000496100 ANKMY2Q8IV38 441 aa8.36□□□□□ -1.07
U2SURP-216ENST00000496100 ZNF295-AS1Q8N0V1 137 aa8.36□□□□□ -1.07
U2SURP-216ENST00000496100 ZSCAN10Q96SZ4 725 aaPredicted RBP8.36□□□□□ -1.07
U2SURP-216ENST00000496100 IQSEC3Q9UPP2 1182 aaPredicted RBP8.36□□□□□ -1.07
U2SURP-216ENST00000496100 ZBTB7CA1YPR0 619 aa8.35□□□□□ -1.07
U2SURP-216ENST00000496100 SLC35F4A4IF30 521 aa8.35□□□□□ -1.07
U2SURP-216ENST00000496100 A6NJY4 79 aa8.35□□□□□ -1.07
U2SURP-216ENST00000496100 SEC13P55735 322 aa8.35□□□□□ -1.07
U2SURP-216ENST00000496100 TLR1Q15399 786 aa8.35□□□□□ -1.07
U2SURP-216ENST00000496100 SLC27A3Q5K4L6 730 aa8.35□□□□□ -1.07
U2SURP-216ENST00000496100 POTEAQ6S8J7 498 aa8.35□□□□□ -1.07
U2SURP-216ENST00000496100 NBPF15Q8N660 670 aa8.35□□□□□ -1.07
U2SURP-216ENST00000496100 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.35□□□□□ -1.07
U2SURP-216ENST00000496100 RHBDD1Q8TEB9 315 aa8.35□□□□□ -1.07
U2SURP-216ENST00000496100 SCHIP1Q9P0W5 487 aaPredicted RBP8.35□□□□□ -1.07
U2SURP-216ENST00000496100 STAU1O95793 577 aaKnown RBP8.34□□□□□ -1.07
U2SURP-216ENST00000496100 DPYDQ12882 1025 aa8.34□□□□□ -1.07
U2SURP-216ENST00000496100 KCTD17Q8N5Z5 321 aa8.34□□□□□ -1.07
U2SURP-216ENST00000496100 GAS2L2Q8NHY3 880 aa8.34□□□□□ -1.07
U2SURP-216ENST00000496100 RBM19Q9Y4C8 960 aaKnown RBP8.34□□□□□ -1.07
U2SURP-216ENST00000496100 SENP3-EIF4A1A0A087X0R7 540 aa8.33□□□□□ -1.08
U2SURP-216ENST00000496100 FIGNL2A6NMB9 653 aa8.33□□□□□ -1.08
U2SURP-216ENST00000496100 PTSQ03393 145 aa8.33□□□□□ -1.08
U2SURP-216ENST00000496100 NBPF10Q6P3W6 841 aaKnown RBP8.33□□□□□ -1.08
U2SURP-216ENST00000496100 TAS1R3Q7RTX0 852 aa8.33□□□□□ -1.08
U2SURP-216ENST00000496100 FAM200AQ8TCP9 573 aa8.33□□□□□ -1.08
U2SURP-216ENST00000496100 NXF1Q9UBU9 619 aaKnown RBP8.33□□□□□ -1.08
U2SURP-216ENST00000496100 SOBPA7XYQ1 873 aa8.32□□□□□ -1.08
U2SURP-216ENST00000496100 GTF2E1P29083 439 aaPredicted RBP8.32□□□□□ -1.08
U2SURP-216ENST00000496100 SWI5Q1ZZU3 235 aa8.32□□□□□ -1.08
U2SURP-216ENST00000496100 GNASQ5JWF2 1037 aa8.32□□□□□ -1.08
U2SURP-216ENST00000496100 DYRK1BQ9Y463 629 aa8.32□□□□□ -1.08
U2SURP-216ENST00000496100 PRICKLE2Q7Z3G6 844 aa8.31□□□□□ -1.08
U2SURP-216ENST00000496100 STAG2Q8N3U4 1231 aa8.31□□□□□ -1.08
U2SURP-216ENST00000496100 NIFKQ9BYG3 293 aaKnown RBP8.31□□□□□ -1.08
U2SURP-216ENST00000496100 BRD1O95696 1058 aa8.3□□□□□ -1.08
U2SURP-216ENST00000496100 POU4F2Q12837 409 aa8.3□□□□□ -1.08
U2SURP-216ENST00000496100 C4orf17Q53FE4 359 aa8.3□□□□□ -1.08
U2SURP-216ENST00000496100 TMEM214Q6NUQ4 689 aaKnown RBP8.3□□□□□ -1.08
U2SURP-216ENST00000496100 C1orf216Q8TAB5 229 aa8.3□□□□□ -1.08
U2SURP-216ENST00000496100 NANOS1Q8WY41 292 aaKnown RBP8.3□□□□□ -1.08
U2SURP-216ENST00000496100 GMCL1Q96IK5 515 aa8.3□□□□□ -1.08
U2SURP-216ENST00000496100 SLAIN2Q9P270 581 aa8.3□□□□□ -1.08
U2SURP-216ENST00000496100 SERTAD1Q9UHV2 236 aa8.3□□□□□ -1.08
U2SURP-216ENST00000496100 A0A1B0GTH6 734 aa8.29□□□□□ -1.08
U2SURP-216ENST00000496100 SFI1A8K8P3 1242 aa8.29□□□□□ -1.08
U2SURP-216ENST00000496100 TERTO14746 1132 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms