RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 THRAP3Q9Y2W1 955 aaKnown RBP19.65■□□□□ 0.74
GAPDH-210ENST00000496049 RRP7AQ9Y3A4 280 aaKnown RBP19.65■□□□□ 0.74
GAPDH-210ENST00000496049 RIPK4P57078 832 aa19.64■□□□□ 0.73
GAPDH-210ENST00000496049 CCDC27Q2M243 656 aa19.64■□□□□ 0.73
GAPDH-210ENST00000496049 ZNF526Q8TF50 670 aaPredicted RBP19.64■□□□□ 0.73
GAPDH-210ENST00000496049 CDCA7Q9BWT1 371 aaPredicted RBP19.64■□□□□ 0.73
GAPDH-210ENST00000496049 SALL2Q9Y467 1007 aaPredicted RBP19.64■□□□□ 0.73
GAPDH-210ENST00000496049 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.63■□□□□ 0.73
GAPDH-210ENST00000496049 CALD1Q05682 793 aaKnown RBP19.62■□□□□ 0.73
GAPDH-210ENST00000496049 MTHFSDQ2M296 383 aaKnown RBP19.62■□□□□ 0.73
GAPDH-210ENST00000496049 C1orf141Q5JVX7 400 aa19.62■□□□□ 0.73
GAPDH-210ENST00000496049 CENPBP07199 599 aaPredicted RBP19.61■□□□□ 0.73
GAPDH-210ENST00000496049 ZNF530Q6P9A1 599 aaPredicted RBP19.61■□□□□ 0.73
GAPDH-210ENST00000496049 NLGN2Q8NFZ4 835 aa19.61■□□□□ 0.73
GAPDH-210ENST00000496049 RTF1Q92541 710 aaKnown RBP19.61■□□□□ 0.73
GAPDH-210ENST00000496049 PCDH11XQ9BZA7 1347 aa19.6■□□□□ 0.73
GAPDH-210ENST00000496049 PCDH11YQ9BZA8 1340 aa19.6■□□□□ 0.73
GAPDH-210ENST00000496049 YBX3P16989 372 aaKnown RBP eCLIP19.6■□□□□ 0.738e-62■□□□□ 10
GAPDH-210ENST00000496049 DDB1Q16531 1140 aa19.6■□□□□ 0.73
GAPDH-210ENST00000496049 COL13A1Q5TAT6 717 aaPredicted RBP19.6■□□□□ 0.73
GAPDH-210ENST00000496049 PAPPAQ13219 1627 aa19.6■□□□□ 0.73
GAPDH-210ENST00000496049 GNAT3A8MTJ3 354 aa19.58■□□□□ 0.72
GAPDH-210ENST00000496049 HTATSF1O43719 755 aaKnown RBP19.58■□□□□ 0.72
GAPDH-210ENST00000496049 AKAP4Q5JQC9 854 aa19.58■□□□□ 0.72
GAPDH-210ENST00000496049 WWC1Q8IX03 1113 aa19.58■□□□□ 0.72
GAPDH-210ENST00000496049 TNS2Q63HR2 1409 aa19.58■□□□□ 0.72
GAPDH-210ENST00000496049 WDR63Q8IWG1 891 aa19.57■□□□□ 0.72
GAPDH-210ENST00000496049 ZCRB1Q8TBF4 217 aaKnown RBP19.57■□□□□ 0.72
GAPDH-210ENST00000496049 ZNF521Q96K83 1311 aa19.56■□□□□ 0.72
GAPDH-210ENST00000496049 HSP90AB1P08238 724 aaKnown RBP19.56■□□□□ 0.72
GAPDH-210ENST00000496049 GOLGA2Q08379 1002 aa19.56■□□□□ 0.72
GAPDH-210ENST00000496049 MARCH10Q8NA82 808 aaPredicted RBP19.56■□□□□ 0.72
GAPDH-210ENST00000496049 VIRMAQ69YN4 1812 aaKnown RBP19.55■□□□□ 0.72
GAPDH-210ENST00000496049 GRIN3BO60391 1043 aa19.55■□□□□ 0.72
GAPDH-210ENST00000496049 IFNL2Q8IZJ0 200 aa19.55■□□□□ 0.72
GAPDH-210ENST00000496049 TRIM35Q9UPQ4 493 aa19.55■□□□□ 0.72
GAPDH-210ENST00000496049 COL24A1Q17RW2 1714 aa19.54■□□□□ 0.72
GAPDH-210ENST00000496049 IL16Q14005 1332 aa19.53■□□□□ 0.72
GAPDH-210ENST00000496049 KAT6BQ8WYB5 2073 aa19.53■□□□□ 0.72
GAPDH-210ENST00000496049 POLD1P28340 1107 aa19.53■□□□□ 0.72
GAPDH-210ENST00000496049 PRELPP51888 382 aa19.53■□□□□ 0.72
GAPDH-210ENST00000496049 ZNF827Q17R98 1081 aa19.53■□□□□ 0.72
GAPDH-210ENST00000496049 TNS4Q8IZW8 715 aa19.53■□□□□ 0.72
GAPDH-210ENST00000496049 ADAMTS7Q9UKP4 1686 aa19.52■□□□□ 0.72
GAPDH-210ENST00000496049 SCN11AQ9UI33 1791 aa19.52■□□□□ 0.72
GAPDH-210ENST00000496049 E9PSI1 815 aa19.52■□□□□ 0.72
GAPDH-210ENST00000496049 PHKG2P15735 406 aa19.52■□□□□ 0.72
GAPDH-210ENST00000496049 TUBGCP6Q96RT7 1819 aa19.51■□□□□ 0.71
GAPDH-210ENST00000496049 EXOC5O00471 708 aa19.51■□□□□ 0.71
GAPDH-210ENST00000496049 SLC34A2O95436 690 aa19.51■□□□□ 0.71
GAPDH-210ENST00000496049 APLP1P51693 650 aa19.51■□□□□ 0.71
GAPDH-210ENST00000496049 MYH16Q9H6N6 1097 aa19.51■□□□□ 0.71
GAPDH-210ENST00000496049 ADCY9O60503 1353 aa19.51■□□□□ 0.71
GAPDH-210ENST00000496049 NHSQ6T4R5 1651 aa19.51■□□□□ 0.71
GAPDH-210ENST00000496049 MCM10Q7L590 875 aa19.5■□□□□ 0.71
GAPDH-210ENST00000496049 BCL9O00512 1426 aa19.5■□□□□ 0.71
GAPDH-210ENST00000496049 QSER1Q2KHR3 1735 aa19.49■□□□□ 0.71
GAPDH-210ENST00000496049 DNAJC5GQ8N7S2 189 aa19.49■□□□□ 0.71
GAPDH-210ENST00000496049 DCAF5Q96JK2 942 aa19.49■□□□□ 0.71
GAPDH-210ENST00000496049 CEMIPQ8WUJ3 1361 aa19.48■□□□□ 0.71
GAPDH-210ENST00000496049 CYP27B1O15528 508 aa19.48■□□□□ 0.71
GAPDH-210ENST00000496049 GNAI1P63096 354 aa19.48■□□□□ 0.71
GAPDH-210ENST00000496049 DDX54Q8TDD1 881 aaKnown RBP19.48■□□□□ 0.71
GAPDH-210ENST00000496049 IFT57Q9NWB7 429 aa19.48■□□□□ 0.71
GAPDH-210ENST00000496049 BTAF1O14981 1849 aa19.48■□□□□ 0.71
GAPDH-210ENST00000496049 MRC1P22897 1456 aa19.48■□□□□ 0.71
GAPDH-210ENST00000496049 TEFQ10587 303 aa19.47■□□□□ 0.71
GAPDH-210ENST00000496049 DCTN1Q14203 1278 aa19.47■□□□□ 0.71
GAPDH-210ENST00000496049 MPRIPQ6WCQ1 1025 aa19.47■□□□□ 0.71
GAPDH-210ENST00000496049 THUMPD2Q9BTF0 503 aaKnown RBP19.47■□□□□ 0.71
GAPDH-210ENST00000496049 KDM6AO15550 1401 aaPredicted RBP19.47■□□□□ 0.71
GAPDH-210ENST00000496049 WDR90Q96KV7 1748 aa19.47■□□□□ 0.71
GAPDH-210ENST00000496049 RNMTO43148 476 aaKnown RBP19.46■□□□□ 0.71
GAPDH-210ENST00000496049 SLFN5Q08AF3 891 aa19.46■□□□□ 0.71
GAPDH-210ENST00000496049 LAS1LQ9Y4W2 734 aaKnown RBP19.46■□□□□ 0.71
GAPDH-210ENST00000496049 SIPA1L3O60292 1781 aaPredicted RBP19.45■□□□□ 0.7
GAPDH-210ENST00000496049 CFAP44Q96MT7 982 aa19.45■□□□□ 0.7
GAPDH-210ENST00000496049 KIF3CO14782 793 aa19.44■□□□□ 0.7
GAPDH-210ENST00000496049 NKX1-1Q15270 411 aaPredicted RBP19.44■□□□□ 0.7
GAPDH-210ENST00000496049 IL17REQ8NFR9 667 aa19.44■□□□□ 0.7
GAPDH-210ENST00000496049 CDCA7LQ96GN5 454 aa19.44■□□□□ 0.7
GAPDH-210ENST00000496049 DOT1LQ8TEK3 1739 aa19.44■□□□□ 0.7
GAPDH-210ENST00000496049 TOGARAM1Q9Y4F4 1720 aa19.43■□□□□ 0.7
GAPDH-210ENST00000496049 ACSBG1Q96GR2 724 aa19.43■□□□□ 0.7
GAPDH-210ENST00000496049 BABAM1Q9NWV8 329 aa19.43■□□□□ 0.7
GAPDH-210ENST00000496049 FANCIQ9NVI1 1328 aa19.43■□□□□ 0.7
GAPDH-210ENST00000496049 SLC16A10Q8TF71 515 aa19.42■□□□□ 0.7
GAPDH-210ENST00000496049 KDM3BQ7LBC6 1761 aa19.42■□□□□ 0.7
GAPDH-210ENST00000496049 ERVV-2B6SEH9 535 aa19.41■□□□□ 0.7
GAPDH-210ENST00000496049 CABP4P57796 275 aa19.41■□□□□ 0.7
GAPDH-210ENST00000496049 TAF7Q15545 349 aaPredicted RBP19.41■□□□□ 0.7
GAPDH-210ENST00000496049 DUSP27Q5VZP5 1158 aa19.41■□□□□ 0.7
GAPDH-210ENST00000496049 LGR6Q9HBX8 967 aa19.41■□□□□ 0.7
GAPDH-210ENST00000496049 TSPYL4Q9UJ04 414 aa19.41■□□□□ 0.7
GAPDH-210ENST00000496049 SLC52A2Q9HAB3 445 aa19.4■□□□□ 0.7
GAPDH-210ENST00000496049 LRRC4BQ9NT99 713 aa19.4■□□□□ 0.7
GAPDH-210ENST00000496049 PNPLA7Q6ZV29 1317 aa19.4■□□□□ 0.7
GAPDH-210ENST00000496049 ZNF853P0CG23 659 aa19.39■□□□□ 0.69
GAPDH-210ENST00000496049 TRMT2AQ8IZ69 625 aaKnown RBP19.39■□□□□ 0.69
GAPDH-210ENST00000496049 TSR2Q969E8 191 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms