RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 C4BP0C0L5 1744 aa13.9□□□□□ -0.18
SMARCAL1-213ENST00000496037 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.9□□□□□ -0.18
SMARCAL1-213ENST00000496037 FCHSD2O94868 740 aa13.9□□□□□ -0.18
SMARCAL1-213ENST00000496037 TGFB2P61812 414 aa13.9□□□□□ -0.18
SMARCAL1-213ENST00000496037 PALLDQ8WX93 1383 aa13.9□□□□□ -0.18
SMARCAL1-213ENST00000496037 LTN1O94822 1766 aa13.9□□□□□ -0.18
SMARCAL1-213ENST00000496037 PKD1L3Q7Z443 1732 aa13.9□□□□□ -0.18
SMARCAL1-213ENST00000496037 KIAA1210Q9ULL0 1709 aa13.9□□□□□ -0.18
SMARCAL1-213ENST00000496037 FAM208AQ9UK61 1670 aaKnown RBP13.89□□□□□ -0.19
SMARCAL1-213ENST00000496037 KTN1Q86UP2 1357 aaKnown RBP13.89□□□□□ -0.19
SMARCAL1-213ENST00000496037 PLCD3Q8N3E9 789 aa13.89□□□□□ -0.19
SMARCAL1-213ENST00000496037 ZCRB1Q8TBF4 217 aaKnown RBP13.89□□□□□ -0.19
SMARCAL1-213ENST00000496037 EVC2Q86UK5 1308 aa13.89□□□□□ -0.19
SMARCAL1-213ENST00000496037 C19orf67A6NJJ6 358 aa13.88□□□□□ -0.19
SMARCAL1-213ENST00000496037 SSFA2P28290 1259 aa13.88□□□□□ -0.19
SMARCAL1-213ENST00000496037 HOMEZQ8IX15 550 aa13.88□□□□□ -0.19
SMARCAL1-213ENST00000496037 PRDM10Q9NQV6 1147 aa13.88□□□□□ -0.19
SMARCAL1-213ENST00000496037 RNF181Q9P0P0 153 aa13.88□□□□□ -0.19
SMARCAL1-213ENST00000496037 TOGARAM1Q9Y4F4 1720 aa13.87□□□□□ -0.19
SMARCAL1-213ENST00000496037 A0A0G2JLW4 131 aa13.87□□□□□ -0.19
SMARCAL1-213ENST00000496037 MMP10P09238 476 aa13.87□□□□□ -0.19
SMARCAL1-213ENST00000496037 AMIGO3Q86WK7 504 aa13.87□□□□□ -0.19
SMARCAL1-213ENST00000496037 LTV1Q96GA3 475 aaPredicted RBP13.87□□□□□ -0.19
SMARCAL1-213ENST00000496037 TAF1LQ8IZX4 1826 aa13.87□□□□□ -0.19
SMARCAL1-213ENST00000496037 USP31Q70CQ4 1352 aa13.86□□□□□ -0.19
SMARCAL1-213ENST00000496037 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMARCAL1-213ENST00000496037 N4BP2Q86UW6 1770 aaPredicted RBP13.86□□□□□ -0.19
SMARCAL1-213ENST00000496037 KIAA1551Q9HCM1 1747 aa13.85□□□□□ -0.19
SMARCAL1-213ENST00000496037 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
SMARCAL1-213ENST00000496037 AIDAQ96BJ3 306 aa13.85□□□□□ -0.19
SMARCAL1-213ENST00000496037 UBR3Q6ZT12 1888 aa13.84□□□□□ -0.19
SMARCAL1-213ENST00000496037 FOXN1O15353 648 aa13.84□□□□□ -0.19
SMARCAL1-213ENST00000496037 DPEP1P16444 411 aa13.84□□□□□ -0.19
SMARCAL1-213ENST00000496037 MLLT1Q03111 559 aaPredicted RBP13.84□□□□□ -0.19
SMARCAL1-213ENST00000496037 NBPF1Q3BBV0 1214 aa13.84□□□□□ -0.19
SMARCAL1-213ENST00000496037 SMIM5Q71RC9 77 aa13.84□□□□□ -0.19
SMARCAL1-213ENST00000496037 KIF13BQ9NQT8 1826 aa13.84□□□□□ -0.19
SMARCAL1-213ENST00000496037 MEGF6O75095 1541 aa13.84□□□□□ -0.19
SMARCAL1-213ENST00000496037 CTCFP49711 727 aaPredicted RBP13.83□□□□□ -0.2
SMARCAL1-213ENST00000496037 SMARCC1Q92922 1105 aaPredicted RBP13.83□□□□□ -0.2
SMARCAL1-213ENST00000496037 VEGFAP15692 232 aaPredicted RBP13.82□□□□□ -0.2
SMARCAL1-213ENST00000496037 MPRIPQ6WCQ1 1025 aa13.82□□□□□ -0.2
SMARCAL1-213ENST00000496037 NME9Q86XW9 330 aa13.82□□□□□ -0.2
SMARCAL1-213ENST00000496037 CCDC87Q9NVE4 849 aa13.82□□□□□ -0.2
SMARCAL1-213ENST00000496037 MKRN1Q9UHC7 482 aaKnown RBP13.82□□□□□ -0.2
SMARCAL1-213ENST00000496037 MON2Q7Z3U7 1717 aa13.81□□□□□ -0.2
SMARCAL1-213ENST00000496037 IP6K1Q92551 441 aa13.81□□□□□ -0.2
SMARCAL1-213ENST00000496037 ABHD8Q96I13 439 aa13.81□□□□□ -0.2
SMARCAL1-213ENST00000496037 ZC3H4Q9UPT8 1303 aaKnown RBP13.81□□□□□ -0.2
SMARCAL1-213ENST00000496037 GNPATO15228 680 aa13.8□□□□□ -0.2
SMARCAL1-213ENST00000496037 CD44P16070 742 aaKnown RBP13.8□□□□□ -0.2
SMARCAL1-213ENST00000496037 SP7Q8TDD2 431 aaPredicted RBP13.8□□□□□ -0.2
SMARCAL1-213ENST00000496037 DCAF5Q96JK2 942 aa13.8□□□□□ -0.2
SMARCAL1-213ENST00000496037 CGNL1Q0VF96 1302 aa13.8□□□□□ -0.2
SMARCAL1-213ENST00000496037 ARFGEF1Q9Y6D6 1849 aa13.79□□□□□ -0.2
SMARCAL1-213ENST00000496037 EVX2Q03828 476 aa13.79□□□□□ -0.2
SMARCAL1-213ENST00000496037 DALRD3Q5D0E6 543 aaKnown RBP13.79□□□□□ -0.2
SMARCAL1-213ENST00000496037 PIM2Q9P1W9 311 aa13.79□□□□□ -0.2
SMARCAL1-213ENST00000496037 ZBTB47Q9UFB7 747 aaPredicted RBP13.79□□□□□ -0.2
SMARCAL1-213ENST00000496037 BRCA1P38398 1863 aaKnown RBP13.78□□□□□ -0.2
SMARCAL1-213ENST00000496037 NLGN1Q8N2Q7 840 aa13.78□□□□□ -0.2
SMARCAL1-213ENST00000496037 RAPGEF4Q8WZA2 1011 aa13.78□□□□□ -0.2
SMARCAL1-213ENST00000496037 PCDH11XQ9BZA7 1347 aa13.78□□□□□ -0.2
SMARCAL1-213ENST00000496037 PCDH11YQ9BZA8 1340 aa13.78□□□□□ -0.2
SMARCAL1-213ENST00000496037 VASPP50552 380 aaPredicted RBP13.77□□□□□ -0.21
SMARCAL1-213ENST00000496037 LINC00116Q8NCU8 138 aa13.77□□□□□ -0.21
SMARCAL1-213ENST00000496037 GTF3C3Q9Y5Q9 886 aa13.77□□□□□ -0.21
SMARCAL1-213ENST00000496037 SBNO2Q9Y2G9 1366 aa13.76□□□□□ -0.21
SMARCAL1-213ENST00000496037 GLTPD2A6NH11 291 aa13.76□□□□□ -0.21
SMARCAL1-213ENST00000496037 TMF1P82094 1093 aa13.76□□□□□ -0.21
SMARCAL1-213ENST00000496037 PARP3Q9Y6F1 533 aa13.76□□□□□ -0.21
SMARCAL1-213ENST00000496037 C4AP0C0L4 1744 aa13.76□□□□□ -0.21
SMARCAL1-213ENST00000496037 CNTNAP1P78357 1384 aa13.75□□□□□ -0.21
SMARCAL1-213ENST00000496037 LOC102724428A0A0B4J2F2 783 aa13.75□□□□□ -0.21
SMARCAL1-213ENST00000496037 CCDC85CA6NKD9 419 aa13.75□□□□□ -0.21
SMARCAL1-213ENST00000496037 LBX1P52954 281 aa13.75□□□□□ -0.21
SMARCAL1-213ENST00000496037 SIK1P57059 783 aa13.75□□□□□ -0.21
SMARCAL1-213ENST00000496037 RAB3GAP2Q9H2M9 1393 aa13.74□□□□□ -0.21
SMARCAL1-213ENST00000496037 TATP17735 454 aaPredicted RBP13.74□□□□□ -0.21
SMARCAL1-213ENST00000496037 KCNA3P22001 575 aa13.74□□□□□ -0.21
SMARCAL1-213ENST00000496037 AMPHP49418 695 aa13.74□□□□□ -0.21
SMARCAL1-213ENST00000496037 HOXC9P31274 260 aa13.73□□□□□ -0.21
SMARCAL1-213ENST00000496037 TRAPPC3LQ5T215 181 aa13.73□□□□□ -0.21
SMARCAL1-213ENST00000496037 HDGFL2Q7Z4V5 671 aaPredicted RBP13.73□□□□□ -0.21
SMARCAL1-213ENST00000496037 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
SMARCAL1-213ENST00000496037 SMG6Q86US8 1419 aaKnown RBP13.73□□□□□ -0.21
SMARCAL1-213ENST00000496037 RGS19P49795 217 aa13.72□□□□□ -0.21
SMARCAL1-213ENST00000496037 RASSF7Q02833 373 aa13.72□□□□□ -0.21
SMARCAL1-213ENST00000496037 RTCBQ9Y3I0 505 aaKnown RBP13.72□□□□□ -0.21
SMARCAL1-213ENST00000496037 CD163L1Q9NR16 1453 aa13.72□□□□□ -0.21
SMARCAL1-213ENST00000496037 MAP3K19Q56UN5 1328 aa13.71□□□□□ -0.21
SMARCAL1-213ENST00000496037 LMNB1P20700 586 aa13.71□□□□□ -0.21
SMARCAL1-213ENST00000496037 ATP6V1AP38606 617 aa13.71□□□□□ -0.21
SMARCAL1-213ENST00000496037 USHBP1Q8N6Y0 703 aa13.71□□□□□ -0.21
SMARCAL1-213ENST00000496037 KDM6AO15550 1401 aaPredicted RBP13.71□□□□□ -0.22
SMARCAL1-213ENST00000496037 RGPD2P0DJD1 1756 aa13.71□□□□□ -0.22
SMARCAL1-213ENST00000496037 NBPF6Q5VWK0 638 aa13.7□□□□□ -0.22
SMARCAL1-213ENST00000496037 TMC1Q8TDI8 760 aa13.7□□□□□ -0.22
SMARCAL1-213ENST00000496037 PIGBQ92521 554 aa13.7□□□□□ -0.22
SMARCAL1-213ENST00000496037 NBPF4Q96M43 638 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms