RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 AKAP4Q5JQC9 854 aa16.56■□□□□ 0.24
MRPL55-233ENST00000495899 LRRC4BQ9NT99 713 aa16.56■□□□□ 0.24
MRPL55-233ENST00000495899 DOT1LQ8TEK3 1739 aa16.56■□□□□ 0.24
MRPL55-233ENST00000495899 SLC15A2Q16348 729 aa16.55■□□□□ 0.24
MRPL55-233ENST00000495899 ANO8Q9HCE9 1232 aaPredicted RBP16.55■□□□□ 0.24
MRPL55-233ENST00000495899 FCHSD2O94868 740 aa16.54■□□□□ 0.24
MRPL55-233ENST00000495899 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
MRPL55-233ENST00000495899 CCNL1Q9UK58 526 aaPredicted RBP16.54■□□□□ 0.24
MRPL55-233ENST00000495899 ZNF316A6NFI3 1004 aaPredicted RBP16.53■□□□□ 0.24
MRPL55-233ENST00000495899 U2AF1L5P0DN76 240 aaPredicted RBP16.53■□□□□ 0.24
MRPL55-233ENST00000495899 U2AF1Q01081 240 aaKnown RBP eCLIP16.53■□□□□ 0.24
MRPL55-233ENST00000495899 MTHFSDQ2M296 383 aaKnown RBP16.53■□□□□ 0.24
MRPL55-233ENST00000495899 PALLDQ8WX93 1383 aa16.52■□□□□ 0.24
MRPL55-233ENST00000495899 CABP4P57796 275 aa16.52■□□□□ 0.24
MRPL55-233ENST00000495899 RSPH6AQ9H0K4 717 aa16.52■□□□□ 0.24
MRPL55-233ENST00000495899 SRCAPQ6ZRS2 3230 aa16.51■□□□□ 0.23
MRPL55-233ENST00000495899 GAS2L2Q8NHY3 880 aa16.51■□□□□ 0.23
MRPL55-233ENST00000495899 AKT1S1Q96B36 256 aa16.51■□□□□ 0.23
MRPL55-233ENST00000495899 KDM6AO15550 1401 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-233ENST00000495899 MYBBP1AQ9BQG0 1328 aaKnown RBP16.5■□□□□ 0.23
MRPL55-233ENST00000495899 PRKAR2BP31323 418 aa16.5■□□□□ 0.23
MRPL55-233ENST00000495899 ATG3Q9NT62 314 aa16.5■□□□□ 0.23
MRPL55-233ENST00000495899 ASAP1Q9ULH1 1129 aa16.5■□□□□ 0.23
MRPL55-233ENST00000495899 TOGARAM1Q9Y4F4 1720 aa16.5■□□□□ 0.23
MRPL55-233ENST00000495899 KAT6BQ8WYB5 2073 aa16.49■□□□□ 0.23
MRPL55-233ENST00000495899 KCNQ4P56696 695 aa16.49■□□□□ 0.23
MRPL55-233ENST00000495899 NFATC2IPQ8NCF5 419 aa16.49■□□□□ 0.23
MRPL55-233ENST00000495899 LOC102724428A0A0B4J2F2 783 aa16.48■□□□□ 0.23
MRPL55-233ENST00000495899 GNAT3A8MTJ3 354 aa16.48■□□□□ 0.23
MRPL55-233ENST00000495899 RNMTO43148 476 aaKnown RBP16.48■□□□□ 0.23
MRPL55-233ENST00000495899 SIK1P57059 783 aa16.48■□□□□ 0.23
MRPL55-233ENST00000495899 ZNF827Q17R98 1081 aa16.48■□□□□ 0.23
MRPL55-233ENST00000495899 PHACTR3Q96KR7 559 aa16.48■□□□□ 0.23
MRPL55-233ENST00000495899 PNNQ9H307 717 aaKnown RBP16.48■□□□□ 0.23
MRPL55-233ENST00000495899 PRKRIP1Q9H875 184 aaPredicted RBP16.48■□□□□ 0.23
MRPL55-233ENST00000495899 LGR6Q9HBX8 967 aa16.48■□□□□ 0.23
MRPL55-233ENST00000495899 SLC52A2Q9HAB3 445 aa16.47■□□□□ 0.23
MRPL55-233ENST00000495899 TFCP2L1Q9NZI6 479 aa16.47■□□□□ 0.23
MRPL55-233ENST00000495899 PAPPAQ13219 1627 aa16.47■□□□□ 0.23
MRPL55-233ENST00000495899 LY75O60449 1722 aa16.47■□□□□ 0.23
MRPL55-233ENST00000495899 SPON1Q9HCB6 807 aa16.46■□□□□ 0.23
MRPL55-233ENST00000495899 ITGB4P16144 1822 aa16.45■□□□□ 0.22
MRPL55-233ENST00000495899 NEFMP07197 916 aa16.45■□□□□ 0.22
MRPL55-233ENST00000495899 MAP3K5Q99683 1374 aa16.45■□□□□ 0.22
MRPL55-233ENST00000495899 ATP6V1AP38606 617 aa16.44■□□□□ 0.22
MRPL55-233ENST00000495899 SLC16A10Q8TF71 515 aa16.44■□□□□ 0.22
MRPL55-233ENST00000495899 PDGFDQ9GZP0 370 aaPredicted RBP16.44■□□□□ 0.22
MRPL55-233ENST00000495899 HTATSF1O43719 755 aaKnown RBP16.43■□□□□ 0.22
MRPL55-233ENST00000495899 FLAD1Q8NFF5 587 aa16.43■□□□□ 0.22
MRPL55-233ENST00000495899 IL17REQ8NFR9 667 aa16.43■□□□□ 0.22
MRPL55-233ENST00000495899 LRP5O75197 1615 aa16.43■□□□□ 0.22
MRPL55-233ENST00000495899 PLEKHF1Q96S99 279 aa16.42■□□□□ 0.22
MRPL55-233ENST00000495899 MTFR1LQ9H019 292 aa16.42■□□□□ 0.22
MRPL55-233ENST00000495899 PNPLA7Q6ZV29 1317 aa16.42■□□□□ 0.22
MRPL55-233ENST00000495899 MRC1P22897 1456 aa16.42■□□□□ 0.22
MRPL55-233ENST00000495899 TEFQ10587 303 aa16.41■□□□□ 0.22
MRPL55-233ENST00000495899 ITPK1Q13572 414 aa16.41■□□□□ 0.22
MRPL55-233ENST00000495899 RTF1Q92541 710 aaKnown RBP16.41■□□□□ 0.22
MRPL55-233ENST00000495899 CEMIPQ8WUJ3 1361 aa16.4■□□□□ 0.22
MRPL55-233ENST00000495899 PTCD1O75127 700 aaKnown RBP16.4■□□□□ 0.22
MRPL55-233ENST00000495899 ZBTB7AO95365 584 aa16.4■□□□□ 0.22
MRPL55-233ENST00000495899 VASPP50552 380 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-233ENST00000495899 LINC00116Q8NCU8 138 aa16.4■□□□□ 0.22
MRPL55-233ENST00000495899 AK7Q96M32 723 aa16.4■□□□□ 0.22
MRPL55-233ENST00000495899 SLC4A9Q96Q91 983 aa16.4■□□□□ 0.22
MRPL55-233ENST00000495899 ADAMTS7Q9UKP4 1686 aa16.4■□□□□ 0.22
MRPL55-233ENST00000495899 CASZ1Q86V15 1759 aa16.39■□□□□ 0.21
MRPL55-233ENST00000495899 RC3H1Q5TC82 1133 aaKnown RBP16.39■□□□□ 0.21
MRPL55-233ENST00000495899 SCN11AQ9UI33 1791 aa16.38■□□□□ 0.21
MRPL55-233ENST00000495899 COL23A1Q86Y22 540 aaPredicted RBP16.38■□□□□ 0.21
MRPL55-233ENST00000495899 MAPK8IP3Q9UPT6 1336 aa16.38■□□□□ 0.21
MRPL55-233ENST00000495899 SSFA2P28290 1259 aa16.37■□□□□ 0.21
MRPL55-233ENST00000495899 PTGER2P43116 358 aa16.37■□□□□ 0.21
MRPL55-233ENST00000495899 WDR43Q15061 677 aaKnown RBP eCLIP16.37■□□□□ 0.21
MRPL55-233ENST00000495899 NFE2L2Q16236 605 aa16.37■□□□□ 0.21
MRPL55-233ENST00000495899 VSIG10Q8N0Z9 540 aa16.37■□□□□ 0.21
MRPL55-233ENST00000495899 C5P01031 1676 aa16.37■□□□□ 0.21
MRPL55-233ENST00000495899 ZNF831Q5JPB2 1677 aa16.37■□□□□ 0.21
MRPL55-233ENST00000495899 SLC39A6Q13433 755 aa16.36■□□□□ 0.21
MRPL55-233ENST00000495899 TTC5Q8N0Z6 440 aa16.36■□□□□ 0.21
MRPL55-233ENST00000495899 PPP1R1BQ9UD71 204 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-233ENST00000495899 CNTNAP4Q9C0A0 1308 aa16.36■□□□□ 0.21
MRPL55-233ENST00000495899 ZNF790Q6PG37 636 aa16.35■□□□□ 0.21
MRPL55-233ENST00000495899 MCM10Q7L590 875 aa16.35■□□□□ 0.21
MRPL55-233ENST00000495899 SGIP1Q9BQI5 828 aa16.35■□□□□ 0.21
MRPL55-233ENST00000495899 C4BP0C0L5 1744 aa16.35■□□□□ 0.21
MRPL55-233ENST00000495899 QSER1Q2KHR3 1735 aa16.35■□□□□ 0.21
MRPL55-233ENST00000495899 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.34■□□□□ 0.21
MRPL55-233ENST00000495899 GNPATO15228 680 aa16.34■□□□□ 0.21
MRPL55-233ENST00000495899 ANP32CO43423 234 aa16.34■□□□□ 0.21
MRPL55-233ENST00000495899 RTCBQ9Y3I0 505 aaKnown RBP16.34■□□□□ 0.21
MRPL55-233ENST00000495899 BTBD11A6QL63 1104 aa16.33■□□□□ 0.2
MRPL55-233ENST00000495899 RPS6KA4O75676 772 aa16.33■□□□□ 0.2
MRPL55-233ENST00000495899 POLD1P28340 1107 aa16.33■□□□□ 0.2
MRPL55-233ENST00000495899 TRAPPC3LQ5T215 181 aa16.33■□□□□ 0.2
MRPL55-233ENST00000495899 ADAMTS8Q9UP79 889 aa16.33■□□□□ 0.2
MRPL55-233ENST00000495899 TAF1LQ8IZX4 1826 aa16.33■□□□□ 0.2
MRPL55-233ENST00000495899 CRKLP46109 303 aaKnown RBP16.32■□□□□ 0.2
MRPL55-233ENST00000495899 DCTN1Q14203 1278 aa16.32■□□□□ 0.2
MRPL55-233ENST00000495899 TAF7Q15545 349 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms