RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 PTCD1O75127 700 aaKnown RBP5.28□□□□□ -1.56
COPS3-211ENST00000495640 STAU1O95793 577 aaKnown RBP5.28□□□□□ -1.56
COPS3-211ENST00000495640 SKOR1P84550 965 aa5.28□□□□□ -1.56
COPS3-211ENST00000495640 PRR20EP86478 221 aa5.28□□□□□ -1.56
COPS3-211ENST00000495640 PRR20CP86479 221 aa5.28□□□□□ -1.56
COPS3-211ENST00000495640 PRR20DP86480 221 aa5.28□□□□□ -1.56
COPS3-211ENST00000495640 PRR20BP86481 221 aa5.28□□□□□ -1.56
COPS3-211ENST00000495640 PRR20AP86496 221 aa5.28□□□□□ -1.56
COPS3-211ENST00000495640 COL19A1Q14993 1142 aa5.28□□□□□ -1.56
COPS3-211ENST00000495640 PLA2G2CQ5R387 149 aa5.28□□□□□ -1.56
COPS3-211ENST00000495640 LCE2AQ5TA79 106 aaPredicted RBP5.28□□□□□ -1.56
COPS3-211ENST00000495640 OSBPL3Q9H4L5 887 aa5.28□□□□□ -1.56
COPS3-211ENST00000495640 PPEF1O14829 653 aaPredicted RBP5.27□□□□□ -1.57
COPS3-211ENST00000495640 FOXO3O43524 673 aa5.27□□□□□ -1.57
COPS3-211ENST00000495640 MAPK1P28482 360 aa5.27□□□□□ -1.57
COPS3-211ENST00000495640 GGCXP38435 758 aa5.27□□□□□ -1.57
COPS3-211ENST00000495640 TRIM32Q13049 653 aa5.27□□□□□ -1.57
COPS3-211ENST00000495640 SPRYD7Q5W111 196 aa5.27□□□□□ -1.57
COPS3-211ENST00000495640 RGL4Q8IZJ4 473 aa5.27□□□□□ -1.57
COPS3-211ENST00000495640 GDF9O60383 454 aa5.26□□□□□ -1.57
COPS3-211ENST00000495640 RECKO95980 971 aa5.26□□□□□ -1.57
COPS3-211ENST00000495640 MYCP01106 439 aaPredicted RBP5.26□□□□□ -1.57
COPS3-211ENST00000495640 TCF3P15923 654 aa5.26□□□□□ -1.57
COPS3-211ENST00000495640 VARSP26640 1264 aaKnown RBP5.26□□□□□ -1.57
COPS3-211ENST00000495640 SLC19A1P41440 591 aa5.26□□□□□ -1.57
COPS3-211ENST00000495640 WNT7BP56706 349 aa5.26□□□□□ -1.57
COPS3-211ENST00000495640 RAB15P59190 212 aa5.26□□□□□ -1.57
COPS3-211ENST00000495640 ZNF326Q5BKZ1 582 aaKnown RBP5.26□□□□□ -1.57
COPS3-211ENST00000495640 CC2D2BQ6DHV5 1058 aa5.26□□□□□ -1.57
COPS3-211ENST00000495640 LIAT1Q6ZQX7 453 aa5.26□□□□□ -1.57
COPS3-211ENST00000495640 CDK15Q96Q40 435 aa5.26□□□□□ -1.57
COPS3-211ENST00000495640 SLC4A9Q96Q91 983 aa5.26□□□□□ -1.57
COPS3-211ENST00000495640 IGHA2P01877 340 aa5.25□□□□□ -1.57
COPS3-211ENST00000495640 INHAP05111 366 aa5.25□□□□□ -1.57
COPS3-211ENST00000495640 GRM5P41594 1212 aa5.25□□□□□ -1.57
COPS3-211ENST00000495640 GDF10P55107 478 aa5.25□□□□□ -1.57
COPS3-211ENST00000495640 FOXK2Q01167 660 aa5.25□□□□□ -1.57
COPS3-211ENST00000495640 NAA30Q147X3 362 aaPredicted RBP5.25□□□□□ -1.57
COPS3-211ENST00000495640 VASH1Q7L8A9 365 aaPredicted RBP5.25□□□□□ -1.57
COPS3-211ENST00000495640 ZNF598Q86UK7 904 aaKnown RBP5.25□□□□□ -1.57
COPS3-211ENST00000495640 TNS4Q8IZW8 715 aa5.25□□□□□ -1.57
COPS3-211ENST00000495640 ANKLE1Q8NAG6 615 aa5.25□□□□□ -1.57
COPS3-211ENST00000495640 SCG3Q8WXD2 468 aaKnown RBP5.25□□□□□ -1.57
COPS3-211ENST00000495640 RBCK1Q9BYM8 510 aa5.25□□□□□ -1.57
COPS3-211ENST00000495640 SAP130Q9H0E3 1048 aa5.25□□□□□ -1.57
COPS3-211ENST00000495640 TSPAN10Q9H1Z9 355 aaPredicted RBP5.25□□□□□ -1.57
COPS3-211ENST00000495640 ETNK1Q9HBU6 452 aa5.25□□□□□ -1.57
COPS3-211ENST00000495640 ATAD2Q6PL18 1390 aa5.25□□□□□ -1.57
COPS3-211ENST00000495640 LILRA1O75019 489 aa5.24□□□□□ -1.57
COPS3-211ENST00000495640 DGAT1O75907 488 aa5.24□□□□□ -1.57
COPS3-211ENST00000495640 POTEAQ6S8J7 498 aa5.24□□□□□ -1.57
COPS3-211ENST00000495640 ZSCAN29Q8IWY8 852 aaPredicted RBP5.24□□□□□ -1.57
COPS3-211ENST00000495640 TMPRSS4Q9NRS4 437 aa5.24□□□□□ -1.57
COPS3-211ENST00000495640 A0A1W2PRU2 124 aa5.23□□□□□ -1.57
COPS3-211ENST00000495640 TNFRSF10BO14763 440 aa5.23□□□□□ -1.57
COPS3-211ENST00000495640 TREHO43280 583 aa5.23□□□□□ -1.57
COPS3-211ENST00000495640 FAM13AO94988 1023 aa5.23□□□□□ -1.57
COPS3-211ENST00000495640 P4HBP07237 508 aaKnown RBP5.23□□□□□ -1.57
COPS3-211ENST00000495640 MPSTP25325 297 aa5.23□□□□□ -1.57
COPS3-211ENST00000495640 FMR1Q06787 632 aaKnown RBP eCLIP5.23□□□□□ -1.57
COPS3-211ENST00000495640 MRPL58Q14197 206 aaKnown RBP5.23□□□□□ -1.57
COPS3-211ENST00000495640 MTFR1Q15390 333 aa5.23□□□□□ -1.57
COPS3-211ENST00000495640 LDLRAD1Q5T700 205 aa5.23□□□□□ -1.57
COPS3-211ENST00000495640 TMC7Q7Z402 723 aa5.23□□□□□ -1.57
COPS3-211ENST00000495640 STAG2Q8N3U4 1231 aa5.23□□□□□ -1.57
COPS3-211ENST00000495640 MPNDQ8N594 471 aa5.23□□□□□ -1.57
COPS3-211ENST00000495640 ZNF784Q8NCA9 323 aaPredicted RBP5.23□□□□□ -1.57
COPS3-211ENST00000495640 SHROOM4Q9ULL8 1493 aa5.23□□□□□ -1.57
COPS3-211ENST00000495640 BACH1O14867 736 aa5.22□□□□□ -1.57
COPS3-211ENST00000495640 SIAH2O43255 324 aa5.22□□□□□ -1.57
COPS3-211ENST00000495640 FZD6O60353 706 aa5.22□□□□□ -1.57
COPS3-211ENST00000495640 FSHRP23945 695 aa5.22□□□□□ -1.57
COPS3-211ENST00000495640 DSC3Q14574 896 aa5.22□□□□□ -1.57
COPS3-211ENST00000495640 EAPPQ56P03 285 aaPredicted RBP5.22□□□□□ -1.57
COPS3-211ENST00000495640 ZNF697Q5TEC3 545 aa5.22□□□□□ -1.57
COPS3-211ENST00000495640 C16orf46Q6P387 395 aa5.22□□□□□ -1.57
COPS3-211ENST00000495640 C8orf37Q96NL8 207 aa5.22□□□□□ -1.57
COPS3-211ENST00000495640 C2orf49Q9BVC5 232 aaPredicted RBP5.22□□□□□ -1.57
COPS3-211ENST00000495640 CYLDQ9NQC7 956 aa5.22□□□□□ -1.57
COPS3-211ENST00000495640 SCHIP1Q9P0W5 487 aaPredicted RBP5.22□□□□□ -1.57
COPS3-211ENST00000495640 ZBTB24O43167 697 aaPredicted RBP5.21□□□□□ -1.58
COPS3-211ENST00000495640 GNRH1P01148 92 aa5.21□□□□□ -1.58
COPS3-211ENST00000495640 ADD1P35611 737 aaKnown RBP5.21□□□□□ -1.58
COPS3-211ENST00000495640 PKDCCQ504Y2 493 aa5.21□□□□□ -1.58
COPS3-211ENST00000495640 FAM26DQ5JW98 314 aa5.21□□□□□ -1.58
COPS3-211ENST00000495640 COX20Q5RI15 118 aa5.21□□□□□ -1.58
COPS3-211ENST00000495640 QTRT2Q9H974 415 aaKnown RBP5.21□□□□□ -1.58
COPS3-211ENST00000495640 USP35Q9P2H5 1018 aa5.21□□□□□ -1.58
COPS3-211ENST00000495640 SERTAD1Q9UHV2 236 aa5.21□□□□□ -1.58
COPS3-211ENST00000495640 LRFN2Q9ULH4 789 aa5.21□□□□□ -1.58
COPS3-211ENST00000495640 IQSEC3Q9UPP2 1182 aaPredicted RBP5.21□□□□□ -1.58
COPS3-211ENST00000495640 HRH3Q9Y5N1 445 aa5.21□□□□□ -1.58
COPS3-211ENST00000495640 FAM187AA6NFU0 413 aa5.2□□□□□ -1.58
COPS3-211ENST00000495640 A6NJY4 79 aa5.2□□□□□ -1.58
COPS3-211ENST00000495640 TNFRSF10AO00220 468 aa5.2□□□□□ -1.58
COPS3-211ENST00000495640 ST8SIA5O15466 376 aa5.2□□□□□ -1.58
COPS3-211ENST00000495640 EIF1AXP47813 144 aaKnown RBP5.2□□□□□ -1.58
COPS3-211ENST00000495640 RPIAP49247 311 aa5.2□□□□□ -1.58
COPS3-211ENST00000495640 DHX9Q08211 1270 aaKnown RBP5.2□□□□□ -1.58
COPS3-211ENST00000495640 RC3H1Q5TC82 1133 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms