RNA–Protein interactions for RNA: ENST00000495228.1

DUBR-205, DPPA2 upstream binding RNA, humanhuman

TSL 2 BASIC

Gene DUBR, Length 411 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-205ENST00000495228 SPDYE16A6NNV3 312 aaPredicted RBP7.79□□□□□ -1.16
DUBR-205ENST00000495228 HDGFP51858 240 aaKnown RBP7.79□□□□□ -1.16
DUBR-205ENST00000495228 NOL8Q76FK4 1167 aaKnown RBP7.79□□□□□ -1.16
DUBR-205ENST00000495228 VRTNQ9H8Y1 702 aa7.79□□□□□ -1.16
DUBR-205ENST00000495228 NOS1P29475 1434 aa7.78□□□□□ -1.16
DUBR-205ENST00000495228 GNPATO15228 680 aa7.78□□□□□ -1.16
DUBR-205ENST00000495228 NEFLP07196 543 aa7.78□□□□□ -1.16
DUBR-205ENST00000495228 KCNA6P17658 529 aa7.78□□□□□ -1.16
DUBR-205ENST00000495228 FAM50AQ14320 339 aaKnown RBP7.78□□□□□ -1.16
DUBR-205ENST00000495228 HIRIP3Q9BW71 556 aaPredicted RBP7.78□□□□□ -1.16
DUBR-205ENST00000495228 EFCAB6Q5THR3 1501 aa7.78□□□□□ -1.16
DUBR-205ENST00000495228 TET3O43151 1660 aa7.77□□□□□ -1.17
DUBR-205ENST00000495228 RPRD2Q5VT52 1461 aaKnown RBP7.77□□□□□ -1.17
DUBR-205ENST00000495228 SF3A1Q15459 793 aaKnown RBP7.77□□□□□ -1.17
DUBR-205ENST00000495228 PKDCCQ504Y2 493 aa7.77□□□□□ -1.17
DUBR-205ENST00000495228 LCE2AQ5TA79 106 aaPredicted RBP7.77□□□□□ -1.17
DUBR-205ENST00000495228 NUDT18Q6ZVK8 323 aa7.77□□□□□ -1.17
DUBR-205ENST00000495228 ANKRD50Q9ULJ7 1429 aa7.77□□□□□ -1.17
DUBR-205ENST00000495228 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.76□□□□□ -1.17
DUBR-205ENST00000495228 ZPR1O75312 459 aa7.76□□□□□ -1.17
DUBR-205ENST00000495228 DGAT1O75907 488 aa7.76□□□□□ -1.17
DUBR-205ENST00000495228 SLC19A1P41440 591 aa7.76□□□□□ -1.17
DUBR-205ENST00000495228 ZC3H6P61129 1189 aaKnown RBP7.76□□□□□ -1.17
DUBR-205ENST00000495228 SIRT1Q96EB6 747 aa7.76□□□□□ -1.17
DUBR-205ENST00000495228 MYO5BQ9ULV0 1848 aa7.75□□□□□ -1.17
DUBR-205ENST00000495228 RNF223E7ERA6 249 aa7.75□□□□□ -1.17
DUBR-205ENST00000495228 ZNF16P17020 682 aaPredicted RBP7.75□□□□□ -1.17
DUBR-205ENST00000495228 B4GALNT3Q6L9W6 998 aa7.75□□□□□ -1.17
DUBR-205ENST00000495228 SLC26A8Q96RN1 970 aa7.75□□□□□ -1.17
DUBR-205ENST00000495228 CDHR5Q9HBB8 845 aa7.75□□□□□ -1.17
DUBR-205ENST00000495228 SNRKQ9NRH2 765 aa7.75□□□□□ -1.17
DUBR-205ENST00000495228 GCC2Q8IWJ2 1684 aa7.75□□□□□ -1.17
DUBR-205ENST00000495228 FAM135BQ49AJ0 1406 aa7.75□□□□□ -1.17
DUBR-205ENST00000495228 CHD2O14647 1828 aaKnown RBP7.75□□□□□ -1.17
DUBR-205ENST00000495228 MED1Q15648 1581 aaPredicted RBP7.75□□□□□ -1.17
DUBR-205ENST00000495228 ROCK1Q13464 1354 aa7.74□□□□□ -1.17
DUBR-205ENST00000495228 NUTM2FA1L443 756 aa7.74□□□□□ -1.17
DUBR-205ENST00000495228 SRPK2P78362 688 aaKnown RBP7.74□□□□□ -1.17
DUBR-205ENST00000495228 PRR20EP86478 221 aa7.74□□□□□ -1.17
DUBR-205ENST00000495228 PRR20CP86479 221 aa7.74□□□□□ -1.17
DUBR-205ENST00000495228 PRR20DP86480 221 aa7.74□□□□□ -1.17
DUBR-205ENST00000495228 PRR20BP86481 221 aa7.74□□□□□ -1.17
DUBR-205ENST00000495228 PRR20AP86496 221 aa7.74□□□□□ -1.17
DUBR-205ENST00000495228 HIC1Q14526 733 aa7.74□□□□□ -1.17
DUBR-205ENST00000495228 SWT1Q5T5J6 900 aaKnown RBP7.74□□□□□ -1.17
DUBR-205ENST00000495228 GDPD2Q9HCC8 539 aa7.74□□□□□ -1.17
DUBR-205ENST00000495228 ADGRB3O60242 1522 aa7.73□□□□□ -1.17
DUBR-205ENST00000495228 SPRYD7Q5W111 196 aa7.73□□□□□ -1.17
DUBR-205ENST00000495228 TREML4Q6UXN2 200 aa7.73□□□□□ -1.17
DUBR-205ENST00000495228 PROCA1Q8NCQ7 364 aaPredicted RBP7.73□□□□□ -1.17
DUBR-205ENST00000495228 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.73□□□□□ -1.17
DUBR-205ENST00000495228 PRM3Q9NNZ6 103 aa7.73□□□□□ -1.17
DUBR-205ENST00000495228 TBX22Q9Y458 520 aa7.73□□□□□ -1.17
DUBR-205ENST00000495228 TMEM131LA2VDJ0 1609 aa7.73□□□□□ -1.17
DUBR-205ENST00000495228 TMEM94Q12767 1356 aa7.72□□□□□ -1.17
DUBR-205ENST00000495228 UNC13BO14795 1591 aa7.72□□□□□ -1.17
DUBR-205ENST00000495228 ZFYVE9O95405 1425 aa7.72□□□□□ -1.17
DUBR-205ENST00000495228 CARNS1A5YM72 827 aa7.72□□□□□ -1.17
DUBR-205ENST00000495228 POM121CA8CG34 1229 aa7.72□□□□□ -1.17
DUBR-205ENST00000495228 MARCH6O60337 910 aa7.72□□□□□ -1.17
DUBR-205ENST00000495228 ZNF598Q86UK7 904 aaKnown RBP7.72□□□□□ -1.17
DUBR-205ENST00000495228 ZNF526Q8TF50 670 aaPredicted RBP7.72□□□□□ -1.17
DUBR-205ENST00000495228 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.72□□□□□ -1.17
DUBR-205ENST00000495228 RBM27Q9P2N5 1060 aaKnown RBP7.72□□□□□ -1.17
DUBR-205ENST00000495228 E9PCH4 1651 aa7.72□□□□□ -1.17
DUBR-205ENST00000495228 PLEKHG1Q9ULL1 1385 aa7.71□□□□□ -1.17
DUBR-205ENST00000495228 NKTRP30414 1462 aaKnown RBP7.71□□□□□ -1.18
DUBR-205ENST00000495228 RFX1P22670 979 aa7.71□□□□□ -1.18
DUBR-205ENST00000495228 TMEM259Q4ZIN3 620 aa7.71□□□□□ -1.18
DUBR-205ENST00000495228 CFAP70Q5T0N1 1121 aa7.71□□□□□ -1.18
DUBR-205ENST00000495228 TMED8Q6PL24 325 aaPredicted RBP7.71□□□□□ -1.18
DUBR-205ENST00000495228 DNAJC14Q6Y2X3 702 aaPredicted RBP7.71□□□□□ -1.18
DUBR-205ENST00000495228 SLF2Q8IX21 1173 aa7.71□□□□□ -1.18
DUBR-205ENST00000495228 PRDM16Q9HAZ2 1276 aa7.71□□□□□ -1.18
DUBR-205ENST00000495228 SLAIN2Q9P270 581 aa7.71□□□□□ -1.18
DUBR-205ENST00000495228 RIPOR2Q9Y4F9 1068 aa7.71□□□□□ -1.18
DUBR-205ENST00000495228 IQGAP3Q86VI3 1631 aa7.7□□□□□ -1.18
DUBR-205ENST00000495228 RIMS2Q9UQ26 1411 aa7.7□□□□□ -1.18
DUBR-205ENST00000495228 NCOA3Q9Y6Q9 1424 aa7.7□□□□□ -1.18
DUBR-205ENST00000495228 LOC102724159A0A0B4J2E5 919 aa7.7□□□□□ -1.18
DUBR-205ENST00000495228 GRXCR2A6NFK2 248 aa7.7□□□□□ -1.18
DUBR-205ENST00000495228 FAM187AA6NFU0 413 aa7.7□□□□□ -1.18
DUBR-205ENST00000495228 VAMP1P23763 118 aa7.7□□□□□ -1.18
DUBR-205ENST00000495228 PWP2Q15269 919 aaKnown RBP7.7□□□□□ -1.18
DUBR-205ENST00000495228 TTC13Q8NBP0 860 aa7.7□□□□□ -1.18
DUBR-205ENST00000495228 BCL2L13Q9BXK5 485 aa7.7□□□□□ -1.18
DUBR-205ENST00000495228 PPP1R1BQ9UD71 204 aaPredicted RBP7.7□□□□□ -1.18
DUBR-205ENST00000495228 NWD1Q149M9 1564 aa7.7□□□□□ -1.18
DUBR-205ENST00000495228 NUP155O75694 1391 aa7.7□□□□□ -1.18
DUBR-205ENST00000495228 MSH6P52701 1360 aa7.7□□□□□ -1.18
DUBR-205ENST00000495228 ROBO1Q9Y6N7 1651 aa7.7□□□□□ -1.18
DUBR-205ENST00000495228 TMEM88BA6NKF7 163 aa7.69□□□□□ -1.18
DUBR-205ENST00000495228 ST8SIA5O15466 376 aa7.69□□□□□ -1.18
DUBR-205ENST00000495228 TLL1O43897 1013 aa7.69□□□□□ -1.18
DUBR-205ENST00000495228 FCHSD2O94868 740 aa7.69□□□□□ -1.18
DUBR-205ENST00000495228 RFC5P40937 340 aa7.69□□□□□ -1.18
DUBR-205ENST00000495228 ABL2P42684 1182 aa7.69□□□□□ -1.18
DUBR-205ENST00000495228 BLOC1S3Q6QNY0 202 aa7.69□□□□□ -1.18
DUBR-205ENST00000495228 LIAT1Q6ZQX7 453 aa7.69□□□□□ -1.18
DUBR-205ENST00000495228 CCER1Q8TC90 406 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms