RNA–Protein interactions for RNA: ENST00000495220.5

ARRDC1-211, Transcript of arrestin domain containing 1, humanhuman

TSL 2

Gene ARRDC1, Length 747 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1-211ENST00000495220 TMOD3Q9NYL9 352 aa26.61■■□□□ 1.85
ARRDC1-211ENST00000495220 CCDC27Q2M243 656 aa26.6■■□□□ 1.85
ARRDC1-211ENST00000495220 TRIM35Q9UPQ4 493 aa26.6■■□□□ 1.85
ARRDC1-211ENST00000495220 MRC1P22897 1456 aa26.6■■□□□ 1.85
ARRDC1-211ENST00000495220 ITGB4P16144 1822 aa26.6■■□□□ 1.85
ARRDC1-211ENST00000495220 TEFQ10587 303 aa26.59■■□□□ 1.85
ARRDC1-211ENST00000495220 MCM10Q7L590 875 aa26.59■■□□□ 1.85
ARRDC1-211ENST00000495220 PIGBQ92521 554 aa26.59■■□□□ 1.85
ARRDC1-211ENST00000495220 VIRMAQ69YN4 1812 aaKnown RBP26.59■■□□□ 1.85
ARRDC1-211ENST00000495220 NFATC2IPQ8NCF5 419 aa26.58■■□□□ 1.85
ARRDC1-211ENST00000495220 DCTN1Q14203 1278 aa26.57■■□□□ 1.84
ARRDC1-211ENST00000495220 NBPF14Q5TI25 921 aa26.57■■□□□ 1.84
ARRDC1-211ENST00000495220 PTF1AQ7RTS3 328 aa26.57■■□□□ 1.84
ARRDC1-211ENST00000495220 PLSCR1O15162 318 aa26.54■■□□□ 1.84
ARRDC1-211ENST00000495220 BTAF1O14981 1849 aa26.53■■□□□ 1.84
ARRDC1-211ENST00000495220 TAF7Q15545 349 aaPredicted RBP26.53■■□□□ 1.84
ARRDC1-211ENST00000495220 SMARCC1Q92922 1105 aaPredicted RBP26.53■■□□□ 1.84
ARRDC1-211ENST00000495220 CALD1Q05682 793 aaKnown RBP26.52■■□□□ 1.84
ARRDC1-211ENST00000495220 WWC1Q8IX03 1113 aa26.51■■□□□ 1.83
ARRDC1-211ENST00000495220 SIPA1L3O60292 1781 aaPredicted RBP26.51■■□□□ 1.83
ARRDC1-211ENST00000495220 THUMPD2Q9BTF0 503 aaKnown RBP26.5■■□□□ 1.83
ARRDC1-211ENST00000495220 BABAM1Q9NWV8 329 aa26.5■■□□□ 1.83
ARRDC1-211ENST00000495220 ATG3Q9NT62 314 aa26.49■■□□□ 1.83
ARRDC1-211ENST00000495220 ASAP1Q9ULH1 1129 aa26.48■■□□□ 1.83
ARRDC1-211ENST00000495220 RREB1Q92766 1687 aa26.47■■□□□ 1.83
ARRDC1-211ENST00000495220 BTBD11A6QL63 1104 aa26.47■■□□□ 1.83
ARRDC1-211ENST00000495220 WDR63Q8IWG1 891 aa26.47■■□□□ 1.83
ARRDC1-211ENST00000495220 RGPD3A6NKT7 1758 aaPredicted RBP26.46■■□□□ 1.83
ARRDC1-211ENST00000495220 RGPD4Q7Z3J3 1758 aa26.46■■□□□ 1.83
ARRDC1-211ENST00000495220 SENP3-EIF4A1A0A087X0R7 540 aa26.45■■□□□ 1.82
ARRDC1-211ENST00000495220 SALL2Q9Y467 1007 aaPredicted RBP26.45■■□□□ 1.82
ARRDC1-211ENST00000495220 PALLDQ8WX93 1383 aa26.45■■□□□ 1.82
ARRDC1-211ENST00000495220 IL16Q14005 1332 aa26.44■■□□□ 1.82
ARRDC1-211ENST00000495220 ZNF790Q6PG37 636 aa26.44■■□□□ 1.82
ARRDC1-211ENST00000495220 CHL1O00533 1208 aa26.43■■□□□ 1.82
ARRDC1-211ENST00000495220 CFAP44Q96MT7 982 aa26.43■■□□□ 1.82
ARRDC1-211ENST00000495220 PAPPAQ13219 1627 aa26.43■■□□□ 1.82
ARRDC1-211ENST00000495220 ZNF521Q96K83 1311 aa26.42■■□□□ 1.82
ARRDC1-211ENST00000495220 SLC39A6Q13433 755 aa26.42■■□□□ 1.82
ARRDC1-211ENST00000495220 TTC5Q8N0Z6 440 aa26.42■■□□□ 1.82
ARRDC1-211ENST00000495220 IFT57Q9NWB7 429 aa26.42■■□□□ 1.82
ARRDC1-211ENST00000495220 NUP188Q5SRE5 1749 aa26.42■■□□□ 1.82
ARRDC1-211ENST00000495220 ZNF853P0CG23 659 aa26.41■■□□□ 1.82
ARRDC1-211ENST00000495220 HMGB2P26583 209 aaKnown RBP26.41■■□□□ 1.82
ARRDC1-211ENST00000495220 GNAI1P63096 354 aa26.41■■□□□ 1.82
ARRDC1-211ENST00000495220 SLC27A3Q5K4L6 730 aa26.41■■□□□ 1.82
ARRDC1-211ENST00000495220 LY75O60449 1722 aa26.4■■□□□ 1.82
ARRDC1-211ENST00000495220 LOC102724428A0A0B4J2F2 783 aa26.39■■□□□ 1.82
ARRDC1-211ENST00000495220 SIK1P57059 783 aa26.39■■□□□ 1.82
ARRDC1-211ENST00000495220 HNRNPUQ00839 825 aaKnown RBP eCLIP26.39■■□□□ 1.82
ARRDC1-211ENST00000495220 TXNRD1Q16881 649 aa26.39■■□□□ 1.82
ARRDC1-211ENST00000495220 MIS18AQ9NYP9 233 aa26.39■■□□□ 1.82
ARRDC1-211ENST00000495220 TSPYL4Q9UJ04 414 aa26.39■■□□□ 1.82
ARRDC1-211ENST00000495220 PROM2Q8N271 834 aa26.38■■□□□ 1.81
ARRDC1-211ENST00000495220 PTCD1O75127 700 aaKnown RBP26.37■■□□□ 1.81
ARRDC1-211ENST00000495220 VSIG10Q8N0Z9 540 aa26.37■■□□□ 1.81
ARRDC1-211ENST00000495220 FMNL2Q96PY5 1086 aa26.37■■□□□ 1.81
ARRDC1-211ENST00000495220 RBM42Q9BTD8 480 aaKnown RBP26.37■■□□□ 1.81
ARRDC1-211ENST00000495220 LAS1LQ9Y4W2 734 aaKnown RBP26.37■■□□□ 1.81
ARRDC1-211ENST00000495220 UBR2Q8IWV8 1755 aa26.37■■□□□ 1.81
ARRDC1-211ENST00000495220 ZNF831Q5JPB2 1677 aa26.37■■□□□ 1.81
ARRDC1-211ENST00000495220 KDM3BQ7LBC6 1761 aa26.36■■□□□ 1.81
ARRDC1-211ENST00000495220 KCPQ6ZWJ8 1503 aa26.36■■□□□ 1.81
ARRDC1-211ENST00000495220 KCNQ3O43525 872 aa26.36■■□□□ 1.81
ARRDC1-211ENST00000495220 SPON1Q9HCB6 807 aa26.36■■□□□ 1.81
ARRDC1-211ENST00000495220 CCNL1Q9UK58 526 aaPredicted RBP26.36■■□□□ 1.81
ARRDC1-211ENST00000495220 ZNF496Q96IT1 587 aaPredicted RBP26.35■■□□□ 1.81
ARRDC1-211ENST00000495220 EIF4A1P60842 406 aaKnown RBP26.34■■□□□ 1.81
ARRDC1-211ENST00000495220 GOLGA2Q08379 1002 aa26.34■■□□□ 1.81
ARRDC1-211ENST00000495220 MBIPQ9NS73 344 aa26.34■■□□□ 1.81
ARRDC1-211ENST00000495220 ATP6V1AP38606 617 aa26.33■■□□□ 1.81
ARRDC1-211ENST00000495220 SLC4A9Q96Q91 983 aa26.33■■□□□ 1.81
ARRDC1-211ENST00000495220 LRRC4BQ9NT99 713 aa26.33■■□□□ 1.81
ARRDC1-211ENST00000495220 HEG1Q9ULI3 1381 aa26.33■■□□□ 1.8
ARRDC1-211ENST00000495220 TEX13AQ9BXU3 409 aaPredicted RBP26.32■■□□□ 1.8
ARRDC1-211ENST00000495220 MYH16Q9H6N6 1097 aa26.31■■□□□ 1.8
ARRDC1-211ENST00000495220 CICQ96RK0 1608 aaPredicted RBP26.31■■□□□ 1.8
ARRDC1-211ENST00000495220 ZBED9Q6R2W3 1325 aa26.3■■□□□ 1.8
ARRDC1-211ENST00000495220 SNRPA1P09661 255 aaKnown RBP26.29■■□□□ 1.8
ARRDC1-211ENST00000495220 ANO8Q9HCE9 1232 aaPredicted RBP26.29■■□□□ 1.8
ARRDC1-211ENST00000495220 E9PSI1 815 aa26.28■■□□□ 1.8
ARRDC1-211ENST00000495220 ITPK1Q13572 414 aa26.28■■□□□ 1.8
ARRDC1-211ENST00000495220 GIGYF1O75420 1035 aaPredicted RBP26.27■■□□□ 1.8
ARRDC1-211ENST00000495220 KCNQ4P56696 695 aa26.27■■□□□ 1.8
ARRDC1-211ENST00000495220 SPINK5Q9NQ38 1064 aaPredicted RBP26.27■■□□□ 1.8
ARRDC1-211ENST00000495220 PPP1R1BQ9UD71 204 aaPredicted RBP26.27■■□□□ 1.8
ARRDC1-211ENST00000495220 SLFN5Q08AF3 891 aa26.26■■□□□ 1.79
ARRDC1-211ENST00000495220 TAF1LQ8IZX4 1826 aa26.25■■□□□ 1.79
ARRDC1-211ENST00000495220 DNAJC10Q8IXB1 793 aa26.25■■□□□ 1.79
ARRDC1-211ENST00000495220 TSR2Q969E8 191 aaKnown RBP26.25■■□□□ 1.79
ARRDC1-211ENST00000495220 STK32BQ9NY57 414 aa26.25■■□□□ 1.79
ARRDC1-211ENST00000495220 SOS1Q07889 1333 aaPredicted RBP26.24■■□□□ 1.79
ARRDC1-211ENST00000495220 FANCIQ9NVI1 1328 aa26.24■■□□□ 1.79
ARRDC1-211ENST00000495220 STARD3NLO95772 234 aa26.24■■□□□ 1.79
ARRDC1-211ENST00000495220 HOXB7P09629 217 aa26.24■■□□□ 1.79
ARRDC1-211ENST00000495220 RC3H1Q5TC82 1133 aaKnown RBP26.24■■□□□ 1.79
ARRDC1-211ENST00000495220 TJP1Q07157 1748 aa26.23■■□□□ 1.79
ARRDC1-211ENST00000495220 C5P01031 1676 aa26.23■■□□□ 1.79
ARRDC1-211ENST00000495220 CYP19A1P11511 503 aaPredicted RBP26.23■■□□□ 1.79
ARRDC1-211ENST00000495220 SLC15A2Q16348 729 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms